BLASTX nr result

ID: Coptis24_contig00018269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018269
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146810.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like ...   119   4e-25
emb|CBI27889.3| unnamed protein product [Vitis vinifera]              116   4e-24
ref|XP_003597580.1| EPIDERMAL PATTERNING FACTOR-like protein [Me...   109   6e-22
ref|XP_003529723.1| PREDICTED: uncharacterized protein LOC100783...   108   1e-21
emb|CBI35909.3| unnamed protein product [Vitis vinifera]              107   2e-21

>ref|XP_004146810.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3-like [Cucumis
           sativus] gi|449476626|ref|XP_004154789.1| PREDICTED:
           EPIDERMAL PATTERNING FACTOR-like protein 3-like [Cucumis
           sativus]
          Length = 116

 Score =  119 bits (299), Expect = 4e-25
 Identities = 56/117 (47%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
 Frame = +2

Query: 203 ISLLQLMSWVSATSRPFAAHDAVYQQGQRPMFLPHSWNSKEGSASMERKIANEEAFKGLS 382
           I +LQL+ WVSA +R FA +         P   PH       S    + +  EE ++G+ 
Sbjct: 9   IFILQLVCWVSAAARNFAPN---------PALPPHKQQGLIDSKQAVKGVKEEEFYRGMR 59

Query: 383 TLGSRPPNCEHRCGGCVPCEAIQVPTTNDQ---LGVQYANYEPEGWRCKCGASVFSP 544
            +GS PP+CEH+C GC+PCEAIQVPTT ++   +GVQY NYEPEGW+CKCG S +SP
Sbjct: 60  KIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP 116


>emb|CBI27889.3| unnamed protein product [Vitis vinifera]
          Length = 88

 Score =  116 bits (291), Expect = 4e-24
 Identities = 44/60 (73%), Positives = 55/60 (91%)
 Frame = +2

Query: 365 AFKGLSTLGSRPPNCEHRCGGCVPCEAIQVPTTNDQLGVQYANYEPEGWRCKCGASVFSP 544
           A++GLSTLGSRPPNC H+C GC+PC+A+Q+PTT D +GVQYANYEPEGW+CKCG+S F+P
Sbjct: 29  AYRGLSTLGSRPPNCNHKCQGCIPCDAVQIPTTTDHIGVQYANYEPEGWKCKCGSSFFNP 88


>ref|XP_003597580.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula]
           gi|87162720|gb|ABD28515.1| hypothetical protein
           MtrDRAFT_AC148918g19v2 [Medicago truncatula]
           gi|355486628|gb|AES67831.1| EPIDERMAL PATTERNING
           FACTOR-like protein [Medicago truncatula]
          Length = 128

 Score =  109 bits (272), Expect = 6e-22
 Identities = 55/120 (45%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
 Frame = +2

Query: 203 ISLLQLMSWVSATSRPFAAHDAVYQQGQRPMFLPHSWNSKEGSASMERKIANEEAFKGLS 382
           I  LQL+S VS   R F + DA+   G      PH     + S  M+  + +++   G+S
Sbjct: 9   ILALQLLSSVSVAKRAFPSTDAMSHPGPGEAPAPHQTIESKKSEKMKEVVYDDDRDIGIS 68

Query: 383 T--LGSRPPNCEHRCGGCVPCEAIQVPTT----NDQLGVQYANYEPEGWRCKCGASVFSP 544
           +  +GS PP+CEH+C GC PCEAIQVP+T     + LG+QYANYEPE W+CKCG S +SP
Sbjct: 69  SNKIGSSPPSCEHKCYGCNPCEAIQVPSTESSKRNHLGLQYANYEPESWKCKCGPSFYSP 128


>ref|XP_003529723.1| PREDICTED: uncharacterized protein LOC100783024 [Glycine max]
          Length = 123

 Score =  108 bits (269), Expect = 1e-21
 Identities = 58/116 (50%), Positives = 77/116 (66%), Gaps = 5/116 (4%)
 Frame = +2

Query: 212 LQLMSWVSATSRPFAAHDAVYQQGQRPMFLPHSWNSKEGSASMERKIAN-EEAFKG-LST 385
           LQ++S VSA  +PF    A  +  Q P   PH+   K+G   +E      +EA++G +S 
Sbjct: 12  LQIVSLVSAVRKPFLP--AKEEALQSPP--PHTIEPKKGLMGIEGTSETMKEAYEGGVSK 67

Query: 386 LGSRPPNCEHRCGGCVPCEAIQVPTTN---DQLGVQYANYEPEGWRCKCGASVFSP 544
           +GS PP+CEH+C GCVPCEAIQVP+T+     LG+QYANYEPE W+CKCG S +SP
Sbjct: 68  IGSSPPSCEHKCYGCVPCEAIQVPSTSTRRSHLGIQYANYEPESWKCKCGLSFYSP 123


>emb|CBI35909.3| unnamed protein product [Vitis vinifera]
          Length = 65

 Score =  107 bits (267), Expect = 2e-21
 Identities = 44/62 (70%), Positives = 52/62 (83%)
 Frame = +2

Query: 359 EEAFKGLSTLGSRPPNCEHRCGGCVPCEAIQVPTTNDQLGVQYANYEPEGWRCKCGASVF 538
           E  +KG S +GSRPP+CE++C GC PCEAIQVPTT + LGVQYANYEPEGW+CKCG S +
Sbjct: 4   EAYYKGQSKIGSRPPSCENKCYGCTPCEAIQVPTTTNHLGVQYANYEPEGWKCKCGPSFY 63

Query: 539 SP 544
           SP
Sbjct: 64  SP 65


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