BLASTX nr result

ID: Coptis24_contig00018252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018252
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270367.1| PREDICTED: uncharacterized protein LOC100255...   149   3e-34
emb|CAN62985.1| hypothetical protein VITISV_027722 [Vitis vinifera]   147   2e-33
ref|XP_002321883.1| predicted protein [Populus trichocarpa] gi|2...   145   5e-33
ref|XP_003521930.1| PREDICTED: uncharacterized protein LOC100813...   145   6e-33
ref|XP_002320100.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32

>ref|XP_002270367.1| PREDICTED: uncharacterized protein LOC100255607 [Vitis vinifera]
          Length = 113

 Score =  149 bits (377), Expect = 3e-34
 Identities = 70/103 (67%), Positives = 85/103 (82%)
 Frame = +2

Query: 125 KNKSMNTIVTVADAASWWCALVLVSFILIAGTFKESSLMADPGMRGNHLMTRPCEEIYVV 304
           K +   + V VADAAS +CA++LV+ IL+A   + SSL  D  ++G+ L+ RPC+EIYVV
Sbjct: 5   KPRFSRSSVAVADAASCYCAVILVALILLASVREYSSLPTDESVKGHQLLARPCDEIYVV 64

Query: 305 GEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKITPAK 433
           GEGETLHTISDKCGDPYIVE+NPHIHDPDDVFPGLVIKITP+K
Sbjct: 65  GEGETLHTISDKCGDPYIVEQNPHIHDPDDVFPGLVIKITPSK 107


>emb|CAN62985.1| hypothetical protein VITISV_027722 [Vitis vinifera]
          Length = 113

 Score =  147 bits (370), Expect = 2e-33
 Identities = 69/103 (66%), Positives = 83/103 (80%)
 Frame = +2

Query: 125 KNKSMNTIVTVADAASWWCALVLVSFILIAGTFKESSLMADPGMRGNHLMTRPCEEIYVV 304
           K +   + V VADAAS +CA++LV+ IL+    + SSL  D  ++G  L+ RPC+EIYVV
Sbjct: 5   KPRFSRSSVAVADAASCYCAVILVALILLXSVREYSSLPTDESVKGXQLLARPCDEIYVV 64

Query: 305 GEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKITPAK 433
           GEGETLHTISDKCGDPYIVE+NPHIHDPDDVFPGLVIKITP+K
Sbjct: 65  GEGETLHTISDKCGDPYIVEQNPHIHDPDDVFPGLVIKITPSK 107


>ref|XP_002321883.1| predicted protein [Populus trichocarpa] gi|222868879|gb|EEF06010.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score =  145 bits (367), Expect = 5e-33
 Identities = 68/104 (65%), Positives = 84/104 (80%)
 Frame = +2

Query: 122 SKNKSMNTIVTVADAASWWCALVLVSFILIAGTFKESSLMADPGMRGNHLMTRPCEEIYV 301
           S  K+M   V +AD ASW CA+VL+  IL+ G+ +E S+  D  ++G+ L  RPC+EIYV
Sbjct: 5   SSKKTMKISVVIADVASWNCAIVLLCLILL-GSIREYSVPKDQPVKGSQLFDRPCDEIYV 63

Query: 302 VGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKITPAK 433
           VGEGETLHTISDKCGDP+IVE+NPHIHDPDDVFPGLVIKITP++
Sbjct: 64  VGEGETLHTISDKCGDPFIVEQNPHIHDPDDVFPGLVIKITPSR 107


>ref|XP_003521930.1| PREDICTED: uncharacterized protein LOC100813243 [Glycine max]
          Length = 114

 Score =  145 bits (366), Expect = 6e-33
 Identities = 67/101 (66%), Positives = 82/101 (81%)
 Frame = +2

Query: 125 KNKSMNTIVTVADAASWWCALVLVSFILIAGTFKESSLMADPGMRGNHLMTRPCEEIYVV 304
           K  ++ +   +ADAASW+CA VLV+ +L++  FK SS+M  P    N L++RPCEEIYVV
Sbjct: 9   KGLTLTSSKAIADAASWYCAFVLVALVLLS-MFKGSSIMMLPSHANNQLLSRPCEEIYVV 67

Query: 305 GEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKITP 427
           GEGETLHTISDKCGDP+IVE NPHIHDPDDVFPGLVI++TP
Sbjct: 68  GEGETLHTISDKCGDPFIVENNPHIHDPDDVFPGLVIEVTP 108


>ref|XP_002320100.1| predicted protein [Populus trichocarpa] gi|222860873|gb|EEE98415.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  142 bits (359), Expect = 4e-32
 Identities = 68/115 (59%), Positives = 85/115 (73%), Gaps = 6/115 (5%)
 Frame = +2

Query: 110 MAPKSKNKSMNTIVTVADAASWWCALVLVSFILIAGTFKESSLMADP------GMRGNHL 271
           MA K  NK M T  ++ADAA+W+CALVL++ IL     + S    D        ++GN +
Sbjct: 1   MASKVSNKPMFTSTSIADAATWYCALVLLALILFTSLREASPTYDDDHHHDFVAVKGNQI 60

Query: 272 MTRPCEEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKITPAKT 436
           + RPC+EIYVV EGETLHTISDKCGDP+IVE NPHIHDPDDV+PGLVIKITP+++
Sbjct: 61  LDRPCDEIYVVKEGETLHTISDKCGDPFIVEENPHIHDPDDVYPGLVIKITPSRS 115


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