BLASTX nr result

ID: Coptis24_contig00018250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018250
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532159.1| DNA binding protein, putative [Ricinus commu...    80   1e-13
gb|AFK39942.1| unknown [Medicago truncatula]                           80   2e-13
emb|CBI27002.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Viti...    79   3e-13
emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]    79   3e-13

>ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
           gi|223528169|gb|EEF30233.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 190

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/62 (62%), Positives = 49/62 (79%)
 Frame = -2

Query: 389 QNQVEFLSMKLTAASSFYDFNSDMDVTQIMQGTNAYEAQEVEKLVREGGYGGLSCFQQTW 210
           QNQVEFLSMKLTAAS+FYDFNS+ D  + MQ   A EA+E+E++++E GYGGL+ F  TW
Sbjct: 130 QNQVEFLSMKLTAASTFYDFNSETDAIETMQRAKAQEAKEIERVMKE-GYGGLTNFHPTW 188

Query: 209 PL 204
            L
Sbjct: 189 SL 190


>gb|AFK39942.1| unknown [Medicago truncatula]
          Length = 73

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/62 (61%), Positives = 49/62 (79%)
 Frame = -2

Query: 389 QNQVEFLSMKLTAASSFYDFNSDMDVTQIMQGTNAYEAQEVEKLVREGGYGGLSCFQQTW 210
           Q+QVEFLS+KLTAAS++YDFNS+ D  + MQ   A EA+E+ +  R+ GYGG+SCFQ TW
Sbjct: 13  QHQVEFLSLKLTAASTYYDFNSEADDLETMQRARASEAKELARYKRD-GYGGISCFQPTW 71

Query: 209 PL 204
           PL
Sbjct: 72  PL 73


>emb|CBI27002.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
 Frame = -2

Query: 389 QNQVEFLSMKLTAASSFYDFN-SDMDVTQIMQGTNAYEAQEVEKLVREGGYGGLSCFQQT 213
           QNQ+EFLSMKL+AAS+FYDFN S+ +  + MQGTNAYE  EVE+ V+E GYGG S    T
Sbjct: 180 QNQIEFLSMKLSAASTFYDFNSSEAEALETMQGTNAYEVHEVERSVKE-GYGGPSHLHST 238

Query: 212 WP 207
           WP
Sbjct: 239 WP 240


>ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
          Length = 258

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
 Frame = -2

Query: 389 QNQVEFLSMKLTAASSFYDFN-SDMDVTQIMQGTNAYEAQEVEKLVREGGYGGLSCFQQT 213
           QNQ+EFLSMKL+AAS+FYDFN S+ +  + MQGTNAYE  EVE+ V+E GYGG S    T
Sbjct: 197 QNQIEFLSMKLSAASTFYDFNSSEAEALETMQGTNAYEVHEVERSVKE-GYGGPSHLHST 255

Query: 212 WP 207
           WP
Sbjct: 256 WP 257


>emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
          Length = 237

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
 Frame = -2

Query: 389 QNQVEFLSMKLTAASSFYDFN-SDMDVTQIMQGTNAYEAQEVEKLVREGGYGGLSCFQQT 213
           QNQ+EFLSMKL+AAS+FYDFN S+ +  + MQGTNAYE  EVE+ V+E GYGG S    T
Sbjct: 176 QNQIEFLSMKLSAASTFYDFNSSEAEALETMQGTNAYEVHEVERSVKE-GYGGPSHLHST 234

Query: 212 WP 207
           WP
Sbjct: 235 WP 236


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