BLASTX nr result
ID: Coptis24_contig00018243
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00018243
(1558 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001237135.1| glyceraldehyde-3-phosphate dehydrogenase B s... 746 0.0
gb|AFG28405.1| glyceraldehyde-3-phosphate dehydrogenase B [Pyrus... 744 0.0
ref|NP_001240080.1| uncharacterized protein LOC100806482 [Glycin... 743 0.0
gb|ACU20783.1| unknown [Glycine max] 737 0.0
emb|CAN69459.1| hypothetical protein VITISV_021576 [Vitis vinifera] 735 0.0
>ref|NP_001237135.1| glyceraldehyde-3-phosphate dehydrogenase B subunit [Glycine max]
gi|77540212|gb|ABA86964.1| glyceraldehyde-3-phosphate
dehydrogenase B subunit [Glycine max]
Length = 451
Score = 746 bits (1926), Expect = 0.0
Identities = 370/442 (83%), Positives = 401/442 (90%), Gaps = 6/442 (1%)
Frame = +2
Query: 80 SRIPTNTRLPPK-----PAQCFSKRLEVTEFSGLRSNSCLTYAKSAREASFYDVVSAQLT 244
+RIP+NTR P K P QC KRLEVTEFSGLRS SC+TYA SARE+SF+D+V++QLT
Sbjct: 10 TRIPSNTRFPSKASHSFPTQCALKRLEVTEFSGLRSTSCVTYANSARESSFFDLVASQLT 69
Query: 245 PKTAGSTPIRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHL 424
PKT GSTP+RGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEV+VVNDSGGVKNASHL
Sbjct: 70 PKTNGSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVNDSGGVKNASHL 129
Query: 425 LKYDSMLGIFKAEVKVVDNQTISVDGKLIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDG 604
LKYDSMLG FKA+VK++DN+TI+VDGK IKVVSSRDPLKLPWAELGIDIVIEGTGVFVDG
Sbjct: 130 LKYDSMLGTFKADVKILDNETITVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDG 189
Query: 605 PGAGKHIQAGAKKVIITAPAKGADIPTYVMGVNEGDYTHE-ANIISNASCTTNCLAPFVK 781
PGAGKHIQAGAKKVIITAPAKGADIPTYV+GVNEGDYTH+ +NIISNASCTTNCLAPFVK
Sbjct: 190 PGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEGDYTHQISNIISNASCTTNCLAPFVK 249
Query: 782 VLDEEFGIVKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQ 961
+LDEEFGIVKGTMTTTHSYTGDQ NIVPTSTGAAKAVSLVLPQ
Sbjct: 250 ILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQ 309
Query: 962 LKGKLNGIALRVPTPNVSVVDLVINVEKKGISAEDVNAAFRKSAEGALKGILAVCDEPLV 1141
LKGKLNGIALRVPTPNVSVVDLV+NVEKKG++AEDVNAAFRK+AEG LKG+L VCD PLV
Sbjct: 310 LKGKLNGIALRVPTPNVSVVDLVVNVEKKGLTAEDVNAAFRKAAEGPLKGVLDVCDVPLV 369
Query: 1142 SVDFRCSDVSCTIDSSLSMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKWPGVSVKG 1321
S+DFRCSDVS TIDSSL+MVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA+KWPG + G
Sbjct: 370 SIDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGAAKAG 429
Query: 1322 SGDPLEEFCETNPAEDECKVFE 1387
SGDPLEEFCETNPA++ECKV+E
Sbjct: 430 SGDPLEEFCETNPADEECKVYE 451
>gb|AFG28405.1| glyceraldehyde-3-phosphate dehydrogenase B [Pyrus x bretschneideri]
Length = 452
Score = 744 bits (1921), Expect = 0.0
Identities = 371/442 (83%), Positives = 400/442 (90%), Gaps = 6/442 (1%)
Frame = +2
Query: 80 SRIPTNTRLPPKPA-----QCFSKRLEVTEFSGLRSNSCLTYAKSAREASFYDVVSAQLT 244
SR+P NTRLP KP+ QCFSKRLEV EFSGLRS+SC+TYA + RE SF+D V+AQLT
Sbjct: 10 SRVPANTRLPSKPSHSFPTQCFSKRLEVGEFSGLRSSSCVTYASNGREQSFFDTVAAQLT 69
Query: 245 PKTAGSTPIRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHL 424
PKTAG TP+RGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHL
Sbjct: 70 PKTAGPTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHL 129
Query: 425 LKYDSMLGIFKAEVKVVDNQTISVDGKLIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDG 604
LKYDSMLG FKA+VK+VDN+TISVDGK +KVVSSRDPLKLPWAE+GIDIVIEGTGVFVDG
Sbjct: 130 LKYDSMLGTFKADVKIVDNETISVDGKPVKVVSSRDPLKLPWAEMGIDIVIEGTGVFVDG 189
Query: 605 PGAGKHIQAGAKKVIITAPAKGADIPTYVMGVNEGDYTHE-ANIISNASCTTNCLAPFVK 781
PGAGKHIQAGAKKVIITAPAKGADIPT+V+GVNE DY H+ ANI+SNASCTTNCLAPFVK
Sbjct: 190 PGAGKHIQAGAKKVIITAPAKGADIPTHVVGVNEKDYGHDVANIVSNASCTTNCLAPFVK 249
Query: 782 VLDEEFGIVKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQ 961
+LDEEFGIVKGTMTTTHSYTGDQ NIVPTSTGAAKAVSLVLPQ
Sbjct: 250 ILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQ 309
Query: 962 LKGKLNGIALRVPTPNVSVVDLVINVEKKGISAEDVNAAFRKSAEGALKGILAVCDEPLV 1141
LKGKLNGIALRVPTPNVSVVDLVINV KKGISAEDVNAAFRK+A+G LKGILAVCD PLV
Sbjct: 310 LKGKLNGIALRVPTPNVSVVDLVINVAKKGISAEDVNAAFRKAADGPLKGILAVCDVPLV 369
Query: 1142 SVDFRCSDVSCTIDSSLSMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKWPGVSVKG 1321
SVDFRC+DVS TIDSSL+MVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA+KWPG +V G
Sbjct: 370 SVDFRCTDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGAAVVG 429
Query: 1322 SGDPLEEFCETNPAEDECKVFE 1387
SGDPLE+FC+TNPA++ECKV+E
Sbjct: 430 SGDPLEDFCQTNPADEECKVYE 451
>ref|NP_001240080.1| uncharacterized protein LOC100806482 [Glycine max]
gi|255636463|gb|ACU18570.1| unknown [Glycine max]
Length = 451
Score = 743 bits (1919), Expect = 0.0
Identities = 369/442 (83%), Positives = 399/442 (90%), Gaps = 6/442 (1%)
Frame = +2
Query: 80 SRIPTNTRLPPK-----PAQCFSKRLEVTEFSGLRSNSCLTYAKSAREASFYDVVSAQLT 244
+RIP+NTR P K P QC KRLEVTEFSGLRS SC+TYA SARE+SF+D+V++QLT
Sbjct: 10 TRIPSNTRFPSKASHSFPTQCALKRLEVTEFSGLRSTSCVTYANSARESSFFDLVASQLT 69
Query: 245 PKTAGSTPIRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHL 424
PKT GSTP+RGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEV+VVNDSGGVKNASHL
Sbjct: 70 PKTNGSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVNDSGGVKNASHL 129
Query: 425 LKYDSMLGIFKAEVKVVDNQTISVDGKLIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDG 604
LKYDSMLG FKA+VK++DN+TI+VDGK IKVVSSRDPLKLPWAELGIDIVIEGTGVFVDG
Sbjct: 130 LKYDSMLGTFKADVKILDNETITVDGKSIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDG 189
Query: 605 PGAGKHIQAGAKKVIITAPAKGADIPTYVMGVNEGDYTHE-ANIISNASCTTNCLAPFVK 781
PGAGKHIQAGAKKVIITAPAKGADIPTYV+GVNEGDYTHE +NIISNASCTTNCLAPFVK
Sbjct: 190 PGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEGDYTHEISNIISNASCTTNCLAPFVK 249
Query: 782 VLDEEFGIVKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQ 961
+LD EFGIVKGTMTTTHSYTGDQ NIVPTSTGAAKAVSLVLPQ
Sbjct: 250 ILDAEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQ 309
Query: 962 LKGKLNGIALRVPTPNVSVVDLVINVEKKGISAEDVNAAFRKSAEGALKGILAVCDEPLV 1141
LKGKLNGIALRVPTPNVSVVDLV+NVEKKG++AEDVNAAFRK+AEG LKG+L VCD PLV
Sbjct: 310 LKGKLNGIALRVPTPNVSVVDLVVNVEKKGLTAEDVNAAFRKAAEGPLKGVLDVCDVPLV 369
Query: 1142 SVDFRCSDVSCTIDSSLSMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKWPGVSVKG 1321
S+DFRCSDVS TIDSSL+MVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA+KWPG G
Sbjct: 370 SIDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGAPKAG 429
Query: 1322 SGDPLEEFCETNPAEDECKVFE 1387
SGDPLE+FCETNPA++ECKV+E
Sbjct: 430 SGDPLEDFCETNPADEECKVYE 451
>gb|ACU20783.1| unknown [Glycine max]
Length = 452
Score = 737 bits (1902), Expect = 0.0
Identities = 368/443 (83%), Positives = 399/443 (90%), Gaps = 7/443 (1%)
Frame = +2
Query: 80 SRIPTNTRLPPK-----PAQCFSKRLEVTEFSGLRSNSCLTYAKSAREASFYDVVSAQLT 244
+RIPTNT+ P K P QC SKRLEVTEFSGLRS SC+TYA ARE+SF+D+V++QLT
Sbjct: 10 TRIPTNTKFPSKASHSFPTQCASKRLEVTEFSGLRSTSCVTYANDARESSFFDLVASQLT 69
Query: 245 PKTAGS-TPIRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASH 421
PKT GS TP+RGETVAKLKVAINGFGRIG NFLRCWHGRKDSPLEV+VVNDSGGVKNASH
Sbjct: 70 PKTNGSSTPVRGETVAKLKVAINGFGRIGGNFLRCWHGRKDSPLEVVVVNDSGGVKNASH 129
Query: 422 LLKYDSMLGIFKAEVKVVDNQTISVDGKLIKVVSSRDPLKLPWAELGIDIVIEGTGVFVD 601
LLKYDSMLG FKA+VK++DN+TI+VDGK IKVVSSRDPLKLPWAELGIDIVIEGTGVFVD
Sbjct: 130 LLKYDSMLGTFKADVKILDNETITVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVD 189
Query: 602 GPGAGKHIQAGAKKVIITAPAKGADIPTYVMGVNEGDYTHE-ANIISNASCTTNCLAPFV 778
GPGAGKHIQAGAKKVIITAPAKGADIPTYV+GVNE DYTH+ +NIISNASCTTNCLAPFV
Sbjct: 190 GPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNERDYTHQISNIISNASCTTNCLAPFV 249
Query: 779 KVLDEEFGIVKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLP 958
K+LDEEFGIVKGTMTTTHSYTGDQ NIVPTSTGAAKAVSLVLP
Sbjct: 250 KILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLP 309
Query: 959 QLKGKLNGIALRVPTPNVSVVDLVINVEKKGISAEDVNAAFRKSAEGALKGILAVCDEPL 1138
QLKGKLNGIALRVPTPNVSVVDLV+NVEKKG++AEDVNAAFRK+AEG LKG+L VCD PL
Sbjct: 310 QLKGKLNGIALRVPTPNVSVVDLVVNVEKKGLTAEDVNAAFRKAAEGPLKGVLDVCDVPL 369
Query: 1139 VSVDFRCSDVSCTIDSSLSMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKWPGVSVK 1318
VS+DFRCSDVS TIDSSL+MVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA+KWPG +
Sbjct: 370 VSIDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGTAKA 429
Query: 1319 GSGDPLEEFCETNPAEDECKVFE 1387
GSGDPLEEFCETNPA++ECKV+E
Sbjct: 430 GSGDPLEEFCETNPADEECKVYE 452
>emb|CAN69459.1| hypothetical protein VITISV_021576 [Vitis vinifera]
Length = 453
Score = 735 bits (1897), Expect = 0.0
Identities = 368/443 (83%), Positives = 398/443 (89%), Gaps = 7/443 (1%)
Frame = +2
Query: 80 SRIPT-NTRLPPK-----PAQCFSKRLEVTEFSGLRSNSCLTYAKSAREASFYDVVSAQL 241
SRIPT NTRLP K P Q F+KRLEV EFSGLRS C+T+AK+ARE SF+DVV++QL
Sbjct: 10 SRIPTTNTRLPSKASHSFPTQFFAKRLEVAEFSGLRSGGCVTFAKNAREPSFFDVVASQL 69
Query: 242 TPKTAGSTPIRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASH 421
TPK G P+RGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPL+VIVVNDSGGVKNASH
Sbjct: 70 TPKAGGPAPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIVVNDSGGVKNASH 129
Query: 422 LLKYDSMLGIFKAEVKVVDNQTISVDGKLIKVVSSRDPLKLPWAELGIDIVIEGTGVFVD 601
LLKYDSMLG FKAEVK+VDN+TISVDGK IKVVSSRDPLKLPWAELGIDIVIEGTGVFVD
Sbjct: 130 LLKYDSMLGTFKAEVKIVDNETISVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVD 189
Query: 602 GPGAGKHIQAGAKKVIITAPAKGADIPTYVMGVNEGDYTHE-ANIISNASCTTNCLAPFV 778
GPGAGKHIQAGAKKVIITAPAKGADIPTYV+GVNEGDY+HE +NI+SNASCTTNCLAPFV
Sbjct: 190 GPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEGDYSHEVSNIVSNASCTTNCLAPFV 249
Query: 779 KVLDEEFGIVKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLP 958
K+LDEE GIVKGTMTTTHSYTGDQ NIVPTSTGAAKAVSLVLP
Sbjct: 250 KILDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLP 309
Query: 959 QLKGKLNGIALRVPTPNVSVVDLVINVEKKGISAEDVNAAFRKSAEGALKGILAVCDEPL 1138
QLKGKLNGIALRVPTPNVSVVDLV+NVEKKGI+AEDVNAAFRK+A+G LKGILAVCD PL
Sbjct: 310 QLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAADGPLKGILAVCDVPL 369
Query: 1139 VSVDFRCSDVSCTIDSSLSMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKWPGVSVK 1318
VSVDF+CSDVS TID+SL+MVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA KWPG + +
Sbjct: 370 VSVDFKCSDVSSTIDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVAAKWPGFAAE 429
Query: 1319 GSGDPLEEFCETNPAEDECKVFE 1387
GSGDPLE+FC+TNPA++ECKV+E
Sbjct: 430 GSGDPLEDFCKTNPADEECKVYE 452