BLASTX nr result

ID: Coptis24_contig00018237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018237
         (1352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280320.1| PREDICTED: uncharacterized protein LOC100260...   182   2e-43
ref|XP_002511957.1| conserved hypothetical protein [Ricinus comm...   172   2e-40
ref|XP_002320178.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-38
ref|XP_002301395.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-38
ref|XP_004133831.1| PREDICTED: uncharacterized protein LOC101214...   159   1e-36

>ref|XP_002280320.1| PREDICTED: uncharacterized protein LOC100260268 [Vitis vinifera]
          Length = 246

 Score =  182 bits (461), Expect = 2e-43
 Identities = 100/249 (40%), Positives = 135/249 (54%), Gaps = 3/249 (1%)
 Frame = +2

Query: 467  PSKPALQKPPGYRDHXXXXXXXXXXXXXXXXXXXXXXXXTPKRRRNYCRXXXXXXXXXXX 646
            P KP LQKPPGYRD                           +RRR+ CR           
Sbjct: 4    PPKPVLQKPPGYRD--PNAPVRLPPKPGLRKPILPSTFPVKRRRRSCCRIFCCFFCIFSF 61

Query: 647  XXXXXXXXXXXXXYLWFEPKLPVYHLQTIQFPRFNVTVKRDGTFLTAHTMVRFEAKNPNS 826
                         YLWF PK+PV+HLQ+++  RFNVTVK D T++ + T V+ E +NPN 
Sbjct: 62   ILIIILFLGGAFFYLWFNPKVPVFHLQSLKIQRFNVTVKSDATYIDSQTAVKVEVRNPND 121

Query: 827  KITFHYGETHVQITIG---DDVELGATSAPGFTQVKGNTTLLKFDTQVSNALINDADGMS 997
            KITF YG+T V +T G   D+ ELG+ S+  FTQ K +TT++K+     N L+ D  G  
Sbjct: 122  KITFRYGKTSVTLTAGLGEDETELGSGSSGEFTQGKKSTTVVKWTVHEKNVLVADEVGAK 181

Query: 998  LMSDVKTKKIMVSVEVRTKFGLTLDSWHWTLGKMDVKVLCNDVTLKGLDGGVDDNPKCTI 1177
            L +  +++ ++VSV VRT+  L +  W   +G + + + C DV LK LDGG  D PKCT+
Sbjct: 182  LKARYRSRAMVVSVVVRTRVSLGVGGWR--IGTVGMHISCGDVALKKLDGG--DMPKCTV 237

Query: 1178 NFLKWINVH 1204
            N LKWIN H
Sbjct: 238  NVLKWINFH 246


>ref|XP_002511957.1| conserved hypothetical protein [Ricinus communis]
            gi|223549137|gb|EEF50626.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 243

 Score =  172 bits (436), Expect = 2e-40
 Identities = 98/242 (40%), Positives = 129/242 (53%), Gaps = 2/242 (0%)
 Frame = +2

Query: 473  KPALQKPPGYRDHXXXXXXXXXXXXXXXXXXXXXXXXTPKRRRNYCRXXXXXXXXXXXXX 652
            KP LQKPPG+RD                           KRR+NY               
Sbjct: 9    KPILQKPPGFRDPSKPVPRPPPPLRKAALPPSFQPR---KRRKNYGGMCCRILVIISFTV 65

Query: 653  XXXXXXXXXXXYLWFEPKLPVYHLQTIQFPRFNVTVKRDGTFLTAHTMVRFEAKNPNSKI 832
                       YLWF+PKLPV+HLQ+ +   F VT K DGT+L A T+ R E +NPNSK+
Sbjct: 66   LLILFILGGVFYLWFDPKLPVFHLQSFKISSFRVTTKPDGTYLNAATVARVEVRNPNSKL 125

Query: 833  TFHYGETHVQITIGDD--VELGATSAPGFTQVKGNTTLLKFDTQVSNALINDADGMSLMS 1006
            T+ Y E+ VQ+T+G D   +LG+ S PGF Q K NTT  K    V N LI D  G  L S
Sbjct: 126  TYRYSESQVQMTLGQDQGTQLGSMSLPGFLQDKKNTTSFKIQMSVKNELIEDGVGSRLKS 185

Query: 1007 DVKTKKIMVSVEVRTKFGLTLDSWHWTLGKMDVKVLCNDVTLKGLDGGVDDNPKCTINFL 1186
              K++K++V+V+V TK G+ +      +G + V V C+ +TLK +DG  DD PKC+I+ L
Sbjct: 186  QFKSRKLVVNVQVTTKVGVDVQGLE--IGMLGVDVSCDGITLKQIDG--DDMPKCSIHTL 241

Query: 1187 KW 1192
            KW
Sbjct: 242  KW 243


>ref|XP_002320178.1| predicted protein [Populus trichocarpa] gi|222860951|gb|EEE98493.1|
            predicted protein [Populus trichocarpa]
          Length = 242

 Score =  166 bits (420), Expect = 1e-38
 Identities = 92/243 (37%), Positives = 127/243 (52%), Gaps = 1/243 (0%)
 Frame = +2

Query: 467  PSKPALQKPPGYRDHXXXXXXXXXXXXXXXXXXXXXXXXTPKRRRNYCRXXXXXXXXXXX 646
            P KP L +PPGYRD                           +R R++CR           
Sbjct: 5    PMKPVLPRPPGYRD-PNHPVKSARRPLPTKTLVPHSFQPRKRRSRHWCRLCLCCLILLLI 63

Query: 647  XXXXXXXXXXXXXYLWFEPKLPVYHLQTIQFPRFNVTVKRDGTFLTAHTMVRFEAKNPNS 826
                         Y+WFEPKLPV+HLQ+ +FP F+VT K DGT+L A  + R E +NPN 
Sbjct: 64   IVILLLIISGGLFYIWFEPKLPVFHLQSFKFPTFSVTKKSDGTYLKAKMVARIEVRNPNE 123

Query: 827  KITFHYGETHVQITIGD-DVELGATSAPGFTQVKGNTTLLKFDTQVSNALINDADGMSLM 1003
            KI +H+GE+ V+ T GD +V LG+TS P FTQ KGN T LK  T V+N LI D  G  ++
Sbjct: 124  KIIYHFGESKVETTTGDEEVNLGSTSLPKFTQEKGNATSLKTVTNVNNELIEDRIGSKIL 183

Query: 1004 SDVKTKKIMVSVEVRTKFGLTLDSWHWTLGKMDVKVLCNDVTLKGLDGGVDDNPKCTINF 1183
                +KK+ V + V+T+ G+ +       G +  +VLC  VTLK  + G  + P+C +  
Sbjct: 184  HQFTSKKLKVKMNVKTRVGIGVAG--MKTGLLGAEVLCGGVTLKETESG--EMPRCVMKI 239

Query: 1184 LKW 1192
            L+W
Sbjct: 240  LQW 242


>ref|XP_002301395.1| predicted protein [Populus trichocarpa] gi|222843121|gb|EEE80668.1|
            predicted protein [Populus trichocarpa]
          Length = 240

 Score =  164 bits (415), Expect = 5e-38
 Identities = 91/243 (37%), Positives = 127/243 (52%), Gaps = 1/243 (0%)
 Frame = +2

Query: 467  PSKPALQKPPGYRDHXXXXXXXXXXXXXXXXXXXXXXXXTPKRRRNYCRXXXXXXXXXXX 646
            P KP LQ+PPGY D                           KRR  +CR           
Sbjct: 5    PMKPVLQRPPGYTD--PNLQAKPAPRPLPTKALLPPSFEPRKRRSRHCRLCLCCLSLLLI 62

Query: 647  XXXXXXXXXXXXXYLWFEPKLPVYHLQTIQFPRFNVTVKRDGTFLTAHTMVRFEAKNPNS 826
                         YLWF+PKLPV+HLQ+ +F  FN+T + DGT+LTA  + R E +NPN 
Sbjct: 63   IAILLMIIAGGLFYLWFDPKLPVFHLQSFKFSAFNITKRSDGTYLTAKMVARIEVRNPNE 122

Query: 827  KITFHYGETHVQITIGDD-VELGATSAPGFTQVKGNTTLLKFDTQVSNALINDADGMSLM 1003
             I +H+GE+ V+ T GDD V LG+T+ P FTQ K NTT L+ +T V+N LI D  G  ++
Sbjct: 123  NIIYHFGESKVETTAGDDEVNLGSTTLPEFTQGKKNTTSLEIETSVNNELIEDGIGSKIL 182

Query: 1004 SDVKTKKIMVSVEVRTKFGLTLDSWHWTLGKMDVKVLCNDVTLKGLDGGVDDNPKCTINF 1183
                +KK+ V ++V+T  G+ ++      G + V+V+C  VTLK       + P+C I+ 
Sbjct: 183  DQFTSKKLKVDMDVKTSIGIGVEG--VKTGLLGVEVVCGGVTLKETS---TEMPRCIIST 237

Query: 1184 LKW 1192
            LKW
Sbjct: 238  LKW 240


>ref|XP_004133831.1| PREDICTED: uncharacterized protein LOC101214208 [Cucumis sativus]
            gi|449478172|ref|XP_004155241.1| PREDICTED:
            uncharacterized LOC101214208 [Cucumis sativus]
          Length = 246

 Score =  159 bits (403), Expect = 1e-36
 Identities = 94/249 (37%), Positives = 130/249 (52%), Gaps = 2/249 (0%)
 Frame = +2

Query: 452  MQNPHPSKPALQKPPGYRDHXXXXXXXXXXXXXXXXXXXXXXXXTPKRRRNYCRXXXXXX 631
            M  P P KP LQKPPG++D                           K+RR+  R      
Sbjct: 1    MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKN-KKRRSCWRRCCCFF 59

Query: 632  XXXXXXXXXXXXXXXXXXYLWFEPKLPVYHLQTIQFPRFNVTVKRDGTFLTAHTMVRFEA 811
                              YLWFEPKLPV HLQ+ +  +FNVT K DG++L A T+ R E 
Sbjct: 60   CLLVLILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEI 119

Query: 812  KNPNSKITFHYGETHVQITIGDD--VELGATSAPGFTQVKGNTTLLKFDTQVSNALINDA 985
            KNPNSK++ +YG+  VQI  G+    ELG+   P F Q + NTT LK +T VSN  ++D 
Sbjct: 120  KNPNSKLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDG 179

Query: 986  DGMSLMSDVKTKKIMVSVEVRTKFGLTLDSWHWTLGKMDVKVLCNDVTLKGLDGGVDDNP 1165
             G +L S  +T +++V+VE RTK G  +D     +  + ++V C  V+LK LD G  + P
Sbjct: 180  AGRNLNSGNRTGELVVNVEARTKIGFVVDGRR--MPPVKIEVSCGSVSLKRLDRG--NVP 235

Query: 1166 KCTINFLKW 1192
            KC+I+  +W
Sbjct: 236  KCSIHLRRW 244


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