BLASTX nr result

ID: Coptis24_contig00018236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018236
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165424.1| PREDICTED: uroporphyrinogen decarboxylase, c...   101   6e-20
ref|XP_004146448.1| PREDICTED: uroporphyrinogen decarboxylase, c...   101   6e-20
ref|XP_002879873.1| hypothetical protein ARALYDRAFT_903342 [Arab...   101   7e-20
ref|NP_181581.1| Uroporphyrinogen decarboxylase 2 [Arabidopsis t...   100   9e-20
ref|XP_002274385.2| PREDICTED: uroporphyrinogen decarboxylase, c...   100   9e-20

>ref|XP_004165424.1| PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like
           [Cucumis sativus]
          Length = 392

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -1

Query: 228 FGSKEFITSRIHDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAQAIRY 73
           FGSKEFIT RI+DTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVA+ IRY
Sbjct: 341 FGSKEFITERINDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAKGIRY 392


>ref|XP_004146448.1| PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like
           [Cucumis sativus]
          Length = 392

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -1

Query: 228 FGSKEFITSRIHDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAQAIRY 73
           FGSKEFIT RI+DTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVA+ IRY
Sbjct: 341 FGSKEFITKRINDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAKGIRY 392


>ref|XP_002879873.1| hypothetical protein ARALYDRAFT_903342 [Arabidopsis lyrata subsp.
           lyrata] gi|297325712|gb|EFH56132.1| hypothetical protein
           ARALYDRAFT_903342 [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = -1

Query: 228 FGSKEFITSRIHDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAQAIRY 73
           FGSKEFITSRIHDTVKKAG+ KHILNLGHGI VGTPEENVAHFFEVAQ IRY
Sbjct: 343 FGSKEFITSRIHDTVKKAGRDKHILNLGHGIKVGTPEENVAHFFEVAQGIRY 394


>ref|NP_181581.1| Uroporphyrinogen decarboxylase 2 [Arabidopsis thaliana]
           gi|6014937|sp|O22886.1|DCUP2_ARATH RecName:
           Full=Uroporphyrinogen decarboxylase 2, chloroplastic;
           Short=UPD2; Short=URO-D2; Flags: Precursor
           gi|2651307|gb|AAB87587.1| putative uroporphyrinogen
           decarboxylase [Arabidopsis thaliana]
           gi|23297097|gb|AAN13092.1| putative uroporphyrinogen
           decarboxylase [Arabidopsis thaliana]
           gi|330254743|gb|AEC09837.1| Uroporphyrinogen
           decarboxylase 2 [Arabidopsis thaliana]
          Length = 394

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = -1

Query: 228 FGSKEFITSRIHDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAQAIRY 73
           FGSKEFITSRIHDTVKKAG+ KHILNLGHGI VGTPEENVAHFFEVAQ IRY
Sbjct: 343 FGSKEFITSRIHDTVKKAGRDKHILNLGHGIKVGTPEENVAHFFEVAQEIRY 394


>ref|XP_002274385.2| PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like
           [Vitis vinifera] gi|297736517|emb|CBI25388.3| unnamed
           protein product [Vitis vinifera]
          Length = 392

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/52 (90%), Positives = 51/52 (98%)
 Frame = -1

Query: 228 FGSKEFITSRIHDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAQAIRY 73
           FGSKEFIT+RI+DTV+KAGKGKHILNLGHGIVVGTPEENVAHFFEVA+ IRY
Sbjct: 341 FGSKEFITNRINDTVRKAGKGKHILNLGHGIVVGTPEENVAHFFEVARGIRY 392


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