BLASTX nr result

ID: Coptis24_contig00018235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018235
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplas...    95   5e-18
ref|XP_002274874.2| PREDICTED: magnesium-chelatase subunit chlD,...    94   2e-17
emb|CBI17197.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_003563940.1| PREDICTED: magnesium-chelatase subunit chlD,...    91   1e-16
ref|XP_003517516.1| PREDICTED: magnesium-chelatase subunit chlD,...    91   1e-16

>ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplast precursor, putative
           [Ricinus communis] gi|223547442|gb|EEF48937.1|
           Magnesium-chelatase subunit chlD, chloroplast precursor,
           putative [Ricinus communis]
          Length = 760

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/49 (93%), Positives = 49/49 (100%)
 Frame = +3

Query: 3   LRGGCEGHRADLYAARVAKCLAALEGREKVNVDDLKKAVELVILPRSMI 149
           LRGGC+GHRA+LYAARVAKCLAALEGREKVNVDDLKKAVELVILPRS+I
Sbjct: 359 LRGGCQGHRAELYAARVAKCLAALEGREKVNVDDLKKAVELVILPRSII 407


>ref|XP_002274874.2| PREDICTED: magnesium-chelatase subunit chlD, chloroplastic [Vitis
           vinifera]
          Length = 720

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +3

Query: 3   LRGGCEGHRADLYAARVAKCLAALEGREKVNVDDLKKAVELVILPRSMI 149
           LRGGC+GHRA+LYAARVAKCL ALEGREKVNVDDLKKAVELVILPRS+I
Sbjct: 316 LRGGCQGHRAELYAARVAKCLTALEGREKVNVDDLKKAVELVILPRSII 364


>emb|CBI17197.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +3

Query: 3   LRGGCEGHRADLYAARVAKCLAALEGREKVNVDDLKKAVELVILPRSMI 149
           LRGGC+GHRA+LYAARVAKCL ALEGREKVNVDDLKKAVELVILPRS+I
Sbjct: 201 LRGGCQGHRAELYAARVAKCLTALEGREKVNVDDLKKAVELVILPRSII 249


>ref|XP_003563940.1| PREDICTED: magnesium-chelatase subunit chlD, chloroplastic-like
           [Brachypodium distachyon]
          Length = 758

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/49 (87%), Positives = 48/49 (97%)
 Frame = +3

Query: 3   LRGGCEGHRADLYAARVAKCLAALEGREKVNVDDLKKAVELVILPRSMI 149
           +RGGC+GHRA+LYAARVAKCLAA+EGREKV VDDLKKAVELVILPRS+I
Sbjct: 347 IRGGCQGHRAELYAARVAKCLAAMEGREKVYVDDLKKAVELVILPRSII 395


>ref|XP_003517516.1| PREDICTED: magnesium-chelatase subunit chlD, chloroplastic-like
           [Glycine max]
          Length = 750

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/49 (89%), Positives = 48/49 (97%)
 Frame = +3

Query: 3   LRGGCEGHRADLYAARVAKCLAALEGREKVNVDDLKKAVELVILPRSMI 149
           LRGGC+GHRA+L+AARVAKCLAALEGREKV VDDLKKAVELVILPRS+I
Sbjct: 346 LRGGCQGHRAELFAARVAKCLAALEGREKVYVDDLKKAVELVILPRSII 394


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