BLASTX nr result
ID: Coptis24_contig00018232
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018232 (370 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278760.2| PREDICTED: lysM domain-containing GPI-anchor... 67 1e-09 emb|CAN62195.1| hypothetical protein VITISV_025519 [Vitis vinifera] 67 1e-09 ref|XP_002525811.1| LysM domain GPI-anchored protein 2 precursor... 66 3e-09 emb|CBI37795.3| unnamed protein product [Vitis vinifera] 63 3e-08 ref|XP_002278742.1| PREDICTED: lysM domain-containing GPI-anchor... 61 1e-07 >ref|XP_002278760.2| PREDICTED: lysM domain-containing GPI-anchored protein 2 [Vitis vinifera] Length = 353 Score = 67.4 bits (163), Expect = 1e-09 Identities = 38/69 (55%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Frame = -2 Query: 204 MRSSKLIVPLLFF-FLYTCTAQTTSFKCSSNSTCQALIDYVPINSTTYSDIKNLFGVKNL 28 M S+ L++ L F L T SFKCSS TC AL+ YV N+TT S I+ LFGVKN Sbjct: 1 MGSATLLLALSFLSVLITAPRAQASFKCSSGPTCNALVGYVSPNTTTLSAIQTLFGVKNF 60 Query: 27 RFLLGANSL 1 R LLGANSL Sbjct: 61 RTLLGANSL 69 >emb|CAN62195.1| hypothetical protein VITISV_025519 [Vitis vinifera] Length = 339 Score = 67.4 bits (163), Expect = 1e-09 Identities = 38/69 (55%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Frame = -2 Query: 204 MRSSKLIVPLLFF-FLYTCTAQTTSFKCSSNSTCQALIDYVPINSTTYSDIKNLFGVKNL 28 M S+ L++ L F L T SFKCSS TC AL+ YV N+TT S I+ LFGVKN Sbjct: 1 MGSATLLLALSFLSVLITAPRAQASFKCSSGPTCNALVGYVSPNTTTLSAIQTLFGVKNF 60 Query: 27 RFLLGANSL 1 R LLGANSL Sbjct: 61 RTLLGANSL 69 >ref|XP_002525811.1| LysM domain GPI-anchored protein 2 precursor, putative [Ricinus communis] gi|223534898|gb|EEF36585.1| LysM domain GPI-anchored protein 2 precursor, putative [Ricinus communis] Length = 361 Score = 65.9 bits (159), Expect = 3e-09 Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 2/70 (2%) Frame = -2 Query: 204 MRSSKLIVPLLFFFLYTCTAQTTSFKC--SSNSTCQALIDYVPINSTTYSDIKNLFGVKN 31 + S++ ++ LL + + + FKC SS+STC ALIDY+P N+T+ S +K LF VKN Sbjct: 3 LSSTEFLLNLLLLTVLFAISTSAPFKCTSSSSSTCHALIDYIPPNTTSLSSLKTLFSVKN 62 Query: 30 LRFLLGANSL 1 LR +LGAN+L Sbjct: 63 LRSILGANNL 72 >emb|CBI37795.3| unnamed protein product [Vitis vinifera] Length = 367 Score = 62.8 bits (151), Expect = 3e-08 Identities = 31/45 (68%), Positives = 34/45 (75%) Frame = -2 Query: 135 SFKCSSNSTCQALIDYVPINSTTYSDIKNLFGVKNLRFLLGANSL 1 SFKCSS TC AL+ YV N+TT S I+ LFGVKN R LLGANSL Sbjct: 16 SFKCSSGPTCNALVGYVSPNTTTLSAIQTLFGVKNFRTLLGANSL 60 >ref|XP_002278742.1| PREDICTED: lysM domain-containing GPI-anchored protein 2 [Vitis vinifera] gi|297744534|emb|CBI37796.3| unnamed protein product [Vitis vinifera] Length = 357 Score = 60.8 bits (146), Expect = 1e-07 Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 4/72 (5%) Frame = -2 Query: 204 MRSSKLIVPLLFFFLYTCTAQT-TSFKCSS---NSTCQALIDYVPINSTTYSDIKNLFGV 37 M S+ L++ L F + T + +F C+S ++TC ALIDYV N+TT S I+ LF V Sbjct: 1 MGSATLLLALFFLSVLTTVPKVQAAFTCNSTTRSTTCSALIDYVSPNTTTLSAIQTLFDV 60 Query: 36 KNLRFLLGANSL 1 KNLR LLGANSL Sbjct: 61 KNLRTLLGANSL 72