BLASTX nr result

ID: Coptis24_contig00018232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018232
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278760.2| PREDICTED: lysM domain-containing GPI-anchor...    67   1e-09
emb|CAN62195.1| hypothetical protein VITISV_025519 [Vitis vinifera]    67   1e-09
ref|XP_002525811.1| LysM domain GPI-anchored protein 2 precursor...    66   3e-09
emb|CBI37795.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002278742.1| PREDICTED: lysM domain-containing GPI-anchor...    61   1e-07

>ref|XP_002278760.2| PREDICTED: lysM domain-containing GPI-anchored protein 2 [Vitis
           vinifera]
          Length = 353

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/69 (55%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = -2

Query: 204 MRSSKLIVPLLFF-FLYTCTAQTTSFKCSSNSTCQALIDYVPINSTTYSDIKNLFGVKNL 28
           M S+ L++ L F   L T      SFKCSS  TC AL+ YV  N+TT S I+ LFGVKN 
Sbjct: 1   MGSATLLLALSFLSVLITAPRAQASFKCSSGPTCNALVGYVSPNTTTLSAIQTLFGVKNF 60

Query: 27  RFLLGANSL 1
           R LLGANSL
Sbjct: 61  RTLLGANSL 69


>emb|CAN62195.1| hypothetical protein VITISV_025519 [Vitis vinifera]
          Length = 339

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/69 (55%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = -2

Query: 204 MRSSKLIVPLLFF-FLYTCTAQTTSFKCSSNSTCQALIDYVPINSTTYSDIKNLFGVKNL 28
           M S+ L++ L F   L T      SFKCSS  TC AL+ YV  N+TT S I+ LFGVKN 
Sbjct: 1   MGSATLLLALSFLSVLITAPRAQASFKCSSGPTCNALVGYVSPNTTTLSAIQTLFGVKNF 60

Query: 27  RFLLGANSL 1
           R LLGANSL
Sbjct: 61  RTLLGANSL 69


>ref|XP_002525811.1| LysM domain GPI-anchored protein 2 precursor, putative [Ricinus
           communis] gi|223534898|gb|EEF36585.1| LysM domain
           GPI-anchored protein 2 precursor, putative [Ricinus
           communis]
          Length = 361

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
 Frame = -2

Query: 204 MRSSKLIVPLLFFFLYTCTAQTTSFKC--SSNSTCQALIDYVPINSTTYSDIKNLFGVKN 31
           + S++ ++ LL   +    + +  FKC  SS+STC ALIDY+P N+T+ S +K LF VKN
Sbjct: 3   LSSTEFLLNLLLLTVLFAISTSAPFKCTSSSSSTCHALIDYIPPNTTSLSSLKTLFSVKN 62

Query: 30  LRFLLGANSL 1
           LR +LGAN+L
Sbjct: 63  LRSILGANNL 72


>emb|CBI37795.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/45 (68%), Positives = 34/45 (75%)
 Frame = -2

Query: 135 SFKCSSNSTCQALIDYVPINSTTYSDIKNLFGVKNLRFLLGANSL 1
           SFKCSS  TC AL+ YV  N+TT S I+ LFGVKN R LLGANSL
Sbjct: 16  SFKCSSGPTCNALVGYVSPNTTTLSAIQTLFGVKNFRTLLGANSL 60


>ref|XP_002278742.1| PREDICTED: lysM domain-containing GPI-anchored protein 2 [Vitis
           vinifera] gi|297744534|emb|CBI37796.3| unnamed protein
           product [Vitis vinifera]
          Length = 357

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
 Frame = -2

Query: 204 MRSSKLIVPLLFFFLYTCTAQT-TSFKCSS---NSTCQALIDYVPINSTTYSDIKNLFGV 37
           M S+ L++ L F  + T   +   +F C+S   ++TC ALIDYV  N+TT S I+ LF V
Sbjct: 1   MGSATLLLALFFLSVLTTVPKVQAAFTCNSTTRSTTCSALIDYVSPNTTTLSAIQTLFDV 60

Query: 36  KNLRFLLGANSL 1
           KNLR LLGANSL
Sbjct: 61  KNLRTLLGANSL 72


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