BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018229
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268463.1| PREDICTED: 50S ribosomal protein L20 [Vitis ...    72   5e-11
ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like is...    71   1e-10
ref|XP_003617050.1| 50S ribosomal protein L20 [Medicago truncatu...    71   1e-10
ref|NP_001235366.1| uncharacterized protein LOC100527387 [Glycin...    70   1e-10

>ref|XP_002268463.1| PREDICTED: 50S ribosomal protein L20 [Vitis vinifera]
           gi|147832535|emb|CAN74888.1| hypothetical protein
           VITISV_041868 [Vitis vinifera]
           gi|296087520|emb|CBI34109.3| unnamed protein product
           [Vitis vinifera]
          Length = 125

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 2   LNRKVLSELSMHEPYSFKGLVDISRNAFPGNKKVVGIPQKQG 127
           LNRKVLSELSMHEPY+FK LVDIS+NAFPGNKK V  P+K+G
Sbjct: 79  LNRKVLSELSMHEPYTFKALVDISQNAFPGNKKAVLPPRKEG 120


>ref|XP_002301732.1| predicted protein [Populus trichocarpa] gi|222843458|gb|EEE81005.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = +2

Query: 2   LNRKVLSELSMHEPYSFKGLVDISRNAFPGNKKVVGIPQK 121
           LNRKVLSE+SMHEPYSFK LVDISRNAFPGNK VV  P+K
Sbjct: 79  LNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVVHPPRK 118


>ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like isoform 1 [Cucumis
           sativus] gi|449444292|ref|XP_004139909.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449444294|ref|XP_004139910.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
           gi|449444296|ref|XP_004139911.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 4 [Cucumis sativus]
           gi|449475856|ref|XP_004154571.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 1 [Cucumis sativus]
           gi|449475859|ref|XP_004154572.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449475863|ref|XP_004154573.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
          Length = 125

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = +2

Query: 2   LNRKVLSELSMHEPYSFKGLVDISRNAFPGNKKVVGIPQK 121
           LNRKVLSE+SMHEPYSFK LVDISRNAFPGNK VV  P+K
Sbjct: 79  LNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVVFPPKK 118


>ref|XP_003617050.1| 50S ribosomal protein L20 [Medicago truncatula]
           gi|355518385|gb|AET00009.1| 50S ribosomal protein L20
           [Medicago truncatula] gi|388499506|gb|AFK37819.1|
           unknown [Medicago truncatula]
          Length = 121

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = +2

Query: 2   LNRKVLSELSMHEPYSFKGLVDISRNAFPGNKKVVGIPQK 121
           LNRKVLSE+SMHEPYSFK LVDISRNAFPGNK VV  P+K
Sbjct: 79  LNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVVPPRK 118


>ref|NP_001235366.1| uncharacterized protein LOC100527387 [Glycine max]
           gi|255632234|gb|ACU16475.1| unknown [Glycine max]
          Length = 121

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = +2

Query: 2   LNRKVLSELSMHEPYSFKGLVDISRNAFPGNKKVVGIPQK 121
           LNRKVLSE+SMHEPYSFK LVDISRNAFPGNK VV  P+K
Sbjct: 79  LNRKVLSEISMHEPYSFKSLVDISRNAFPGNKNVVIPPRK 118