BLASTX nr result
ID: Coptis24_contig00018225
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018225 (432 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI37733.3| unnamed protein product [Vitis vinifera] 213 1e-53 ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vin... 213 1e-53 emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera] 213 1e-53 ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinu... 213 1e-53 ref|XP_002313575.1| glutamate-gated kainate-type ion channel rec... 206 1e-51 >emb|CBI37733.3| unnamed protein product [Vitis vinifera] Length = 1147 Score = 213 bits (543), Expect = 1e-53 Identities = 100/142 (70%), Positives = 124/142 (87%) Frame = +3 Query: 6 LGDKLAERRCRISYKAALPPDPGATQAEITDTLVKVALMESRIIVVHTYSNSGLMVFDIA 185 LGDKLAER+C+ISYKAALPPDP AT+ ++ + LVKV +MESR+IV+HT S +GL+VFD+A Sbjct: 409 LGDKLAERQCKISYKAALPPDPKATRDQVFNELVKVRMMESRVIVLHTLSKTGLLVFDVA 468 Query: 186 KHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHTPPSEKKKSFFSRWS 365 K+L M+++GYVWIA+TWLST+LDS +PLS S+QGVLTLRPHTP S+KK+ F SRW+ Sbjct: 469 KYLGMMESGYVWIASTWLSTILDS-TPLSSKTADSIQGVLTLRPHTPDSKKKREFSSRWN 527 Query: 366 QLSNGTIGLNPYGLYAYDTVWI 431 LSNGTIGLNPYGLYAYDTVW+ Sbjct: 528 HLSNGTIGLNPYGLYAYDTVWM 549 >ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vinifera] Length = 917 Score = 213 bits (543), Expect = 1e-53 Identities = 100/142 (70%), Positives = 124/142 (87%) Frame = +3 Query: 6 LGDKLAERRCRISYKAALPPDPGATQAEITDTLVKVALMESRIIVVHTYSNSGLMVFDIA 185 LGDKLAER+C+ISYKAALPPDP AT+ ++ + LVKV +MESR+IV+HT S +GL+VFD+A Sbjct: 179 LGDKLAERQCKISYKAALPPDPKATRDQVFNELVKVRMMESRVIVLHTLSKTGLLVFDVA 238 Query: 186 KHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHTPPSEKKKSFFSRWS 365 K+L M+++GYVWIA+TWLST+LDS +PLS S+QGVLTLRPHTP S+KK+ F SRW+ Sbjct: 239 KYLGMMESGYVWIASTWLSTILDS-TPLSSKTADSIQGVLTLRPHTPDSKKKREFSSRWN 297 Query: 366 QLSNGTIGLNPYGLYAYDTVWI 431 LSNGTIGLNPYGLYAYDTVW+ Sbjct: 298 HLSNGTIGLNPYGLYAYDTVWM 319 >emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera] Length = 959 Score = 213 bits (543), Expect = 1e-53 Identities = 100/142 (70%), Positives = 124/142 (87%) Frame = +3 Query: 6 LGDKLAERRCRISYKAALPPDPGATQAEITDTLVKVALMESRIIVVHTYSNSGLMVFDIA 185 LGDKLAER+C+ISYKAALPPDP AT+ ++ + LVKV +MESR+IV+HT S +GL+VFD+A Sbjct: 221 LGDKLAERQCKISYKAALPPDPKATRDQVFNELVKVRMMESRVIVLHTLSKTGLLVFDVA 280 Query: 186 KHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHTPPSEKKKSFFSRWS 365 K+L M+++GYVWIA+TWLST+LDS +PLS S+QGVLTLRPHTP S+KK+ F SRW+ Sbjct: 281 KYLGMMESGYVWIASTWLSTILDS-TPLSSKTADSIQGVLTLRPHTPDSKKKREFSSRWN 339 Query: 366 QLSNGTIGLNPYGLYAYDTVWI 431 LSNGTIGLNPYGLYAYDTVW+ Sbjct: 340 HLSNGTIGLNPYGLYAYDTVWM 361 >ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis] gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant, putative [Ricinus communis] Length = 924 Score = 213 bits (542), Expect = 1e-53 Identities = 97/143 (67%), Positives = 121/143 (84%) Frame = +3 Query: 3 ALGDKLAERRCRISYKAALPPDPGATQAEITDTLVKVALMESRIIVVHTYSNSGLMVFDI 182 ALGDKLAERRCRISYKAALPPDP A ++++ D LVK+ MESR+IV+HT+S +GL+VFD+ Sbjct: 177 ALGDKLAERRCRISYKAALPPDPTANRSDVQDELVKILRMESRVIVLHTFSRTGLLVFDV 236 Query: 183 AKHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHTPPSEKKKSFFSRW 362 A+ L M++ G+VWIATTWLSTVLDS SPL S+QGV+T RPHTP S++K+ F SRW Sbjct: 237 AQSLGMMEKGFVWIATTWLSTVLDSNSPLPSKTANSIQGVITFRPHTPDSKRKRDFESRW 296 Query: 363 SQLSNGTIGLNPYGLYAYDTVWI 431 ++LSNG+IGLNPY LYAYDTVW+ Sbjct: 297 NKLSNGSIGLNPYALYAYDTVWM 319 >ref|XP_002313575.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222849983|gb|EEE87530.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 900 Score = 206 bits (525), Expect = 1e-51 Identities = 96/142 (67%), Positives = 120/142 (84%) Frame = +3 Query: 6 LGDKLAERRCRISYKAALPPDPGATQAEITDTLVKVALMESRIIVVHTYSNSGLMVFDIA 185 LGDKLAERRC+ISYKAALPP+P AT+++I D L K+ MESR+IV++T+S +GL+VFD+A Sbjct: 180 LGDKLAERRCKISYKAALPPEPKATRSDIQDELAKILGMESRVIVLNTFSKTGLLVFDVA 239 Query: 186 KHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHTPPSEKKKSFFSRWS 365 K L M++ G+VWI T+WLSTV+DS SPL P S+QGVL LRPHTP S++K F SRW+ Sbjct: 240 KALGMMENGFVWIVTSWLSTVIDSASPL-PTTANSIQGVLALRPHTPDSKRKGDFMSRWN 298 Query: 366 QLSNGTIGLNPYGLYAYDTVWI 431 QLSNG+IGLNPYGLYAYDTVW+ Sbjct: 299 QLSNGSIGLNPYGLYAYDTVWL 320