BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018223
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523964.1| TATA-binding protein-associated factor MOT1,...   424   e-116
ref|XP_002275285.1| PREDICTED: TATA-binding protein-associated f...   417   e-114
ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated f...   410   e-112
emb|CBI40030.3| unnamed protein product [Vitis vinifera]              407   e-111
ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated f...   399   e-109

>ref|XP_002523964.1| TATA-binding protein-associated factor MOT1, putative [Ricinus
            communis] gi|223536691|gb|EEF38332.1| TATA-binding
            protein-associated factor MOT1, putative [Ricinus
            communis]
          Length = 1920

 Score =  424 bits (1091), Expect = e-116
 Identities = 228/341 (66%), Positives = 264/341 (77%)
 Frame = -3

Query: 1023 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYLRSKNWDT 844
            MAQQSSRLHRLLTLLDTGSTQATRF AA QIG IAK+HPQDLSS LKKVS YLRSKNWDT
Sbjct: 1    MAQQSSRLHRLLTLLDTGSTQATRFTAARQIGDIAKSHPQDLSSLLKKVSQYLRSKNWDT 60

Query: 843  RVXXXXXXXXXAQNVVHTSLQELFASVEAELLAAGISGNGEDVIMSWTNSHPDFVSGLSF 664
            RV         AQNV HTSL ELFASVEA++   G+SG  ED++ +W +     +S  SF
Sbjct: 61   RVAAAHAIGAIAQNVKHTSLAELFASVEAKMSEVGMSGVVEDLV-AWPDFLSKIISSGSF 119

Query: 663  RSFDLSKVLEFGALLASGGQEYDVASDGSKTPGERLARQKQNLRRRLGLDVCEQFMDVND 484
            RSF+++KVLEFGALLAS GQEYD+A+D SK P ERLARQKQNLRRRLGLDVCEQFMDVND
Sbjct: 120  RSFEINKVLEFGALLASRGQEYDIANDNSKNPRERLARQKQNLRRRLGLDVCEQFMDVND 179

Query: 483  VIKDEDLLVNKFSSHENGVGHRSYIFQHGNQIQQLVANIVPTFLSKRPSARELNLLKRKA 304
            VIKDEDLLV K  S  NG+G+R Y+    + IQQLVA++VPT +S+RPSARELNLLKRKA
Sbjct: 180  VIKDEDLLVQKLHSQGNGLGNRFYMPPSVHNIQQLVASMVPTVVSRRPSARELNLLKRKA 239

Query: 303  KINAKDQTKSWCDAAESEAPHSQSLVLPKVTCPDPISSNKXXXXXXXXXXXXXXDGEGQW 124
            KIN+KDQTK W +  ++E   SQS   PK +  D  +S+K              DG+G+W
Sbjct: 240  KINSKDQTKGWSEDGDAEMSFSQS-TTPKASNQDSFNSSK----VDADEDSFEHDGDGKW 294

Query: 123  PFQNFVEQLILDMFDPNWEVRHGSMMALREIITHHGGSSGV 1
            PF+ FVEQL+LDMFDP WEVRHGS+MALREI+THHGGS+GV
Sbjct: 295  PFRGFVEQLMLDMFDPVWEVRHGSVMALREILTHHGGSAGV 335


>ref|XP_002275285.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 1
            [Vitis vinifera]
          Length = 2052

 Score =  417 bits (1073), Expect = e-114
 Identities = 214/341 (62%), Positives = 261/341 (76%)
 Frame = -3

Query: 1023 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYLRSKNWDT 844
            M+ QSSRLHRLLTLLDTGSTQATR  AA QIG IAK+HPQDL+S L+KVS YLRSKNWDT
Sbjct: 1    MSHQSSRLHRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLNSLLRKVSQYLRSKNWDT 60

Query: 843  RVXXXXXXXXXAQNVVHTSLQELFASVEAELLAAGISGNGEDVIMSWTNSHPDFVSGLSF 664
            RV         A+NV H+SL ELFA V   +  AGISG  EDV+ +W + HP  ++G  F
Sbjct: 61   RVAAAHAIGAIAENVKHSSLSELFACVGKRMSEAGISGEVEDVV-AWPDYHPKIMAGSPF 119

Query: 663  RSFDLSKVLEFGALLASGGQEYDVASDGSKTPGERLARQKQNLRRRLGLDVCEQFMDVND 484
            RSFD++KVLEFGALLASGGQEYD+ASD +K P +RLARQKQNLRRRLGLD+CEQFMDVND
Sbjct: 120  RSFDINKVLEFGALLASGGQEYDIASDNTKNPRDRLARQKQNLRRRLGLDMCEQFMDVND 179

Query: 483  VIKDEDLLVNKFSSHENGVGHRSYIFQHGNQIQQLVANIVPTFLSKRPSARELNLLKRKA 304
            +I+DEDL+V+KF+   NG+ +R    Q  + IQ+LVAN+VPT +SKRPSARELNLLKRKA
Sbjct: 180  MIRDEDLIVHKFNPQGNGIDNRFNNSQSVHSIQRLVANMVPTIISKRPSARELNLLKRKA 239

Query: 303  KINAKDQTKSWCDAAESEAPHSQSLVLPKVTCPDPISSNKXXXXXXXXXXXXXXDGEGQW 124
            KIN+KDQTK W +  ++    ++ L  PK +CP+ + S+K              DG+G+W
Sbjct: 240  KINSKDQTKGWSEDGDT----AEVLTTPKESCPESLHSDKVFMDPIVDEDNFDHDGDGRW 295

Query: 123  PFQNFVEQLILDMFDPNWEVRHGSMMALREIITHHGGSSGV 1
            PF +FVEQL+LDMFDP WE+RHGS+MALREI+TH G S+GV
Sbjct: 296  PFHSFVEQLLLDMFDPVWEIRHGSVMALREILTHQGASAGV 336


>ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 3
            [Vitis vinifera]
          Length = 2060

 Score =  410 bits (1054), Expect = e-112
 Identities = 214/349 (61%), Positives = 261/349 (74%), Gaps = 8/349 (2%)
 Frame = -3

Query: 1023 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYLRSKNWDT 844
            M+ QSSRLHRLLTLLDTGSTQATR  AA QIG IAK+HPQDL+S L+KVS YLRSKNWDT
Sbjct: 1    MSHQSSRLHRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLNSLLRKVSQYLRSKNWDT 60

Query: 843  RVXXXXXXXXXAQNVVHTSLQELFASVEAELLAAGISGNGEDVIMSWTNSHPDFVSGLSF 664
            RV         A+NV H+SL ELFA V   +  AGISG  EDV+ +W + HP  ++G  F
Sbjct: 61   RVAAAHAIGAIAENVKHSSLSELFACVGKRMSEAGISGEVEDVV-AWPDYHPKIMAGSPF 119

Query: 663  RSFDLSKVLEFGALLASGGQEYDVASDGSKTPGERLARQKQNLRRRLGLDVCEQFMDVND 484
            RSFD++KVLEFGALLASGGQEYD+ASD +K P +RLARQKQNLRRRLGLD+CEQFMDVND
Sbjct: 120  RSFDINKVLEFGALLASGGQEYDIASDNTKNPRDRLARQKQNLRRRLGLDMCEQFMDVND 179

Query: 483  VIKDEDLLVNKFSSHENGVGHRSYIFQHGNQIQQLVANIVPTFLSKRPSARELNLLKRKA 304
            +I+DEDL+V+KF+   NG+ +R    Q  + IQ+LVAN+VPT +SKRPSARELNLLKRKA
Sbjct: 180  MIRDEDLIVHKFNPQGNGIDNRFNNSQSVHSIQRLVANMVPTIISKRPSARELNLLKRKA 239

Query: 303  KINAKDQTKSWCDAAESEAPHSQSLVLPKVTCPDPISSNK--------XXXXXXXXXXXX 148
            KIN+KDQTK W +  ++    ++ L  PK +CP+ + S+K                    
Sbjct: 240  KINSKDQTKGWSEDGDT----AEVLTTPKESCPESLHSDKVFDSYSLQVFMDPIVDEDNF 295

Query: 147  XXDGEGQWPFQNFVEQLILDMFDPNWEVRHGSMMALREIITHHGGSSGV 1
              DG+G+WPF +FVEQL+LDMFDP WE+RHGS+MALREI+TH G S+GV
Sbjct: 296  DHDGDGRWPFHSFVEQLLLDMFDPVWEIRHGSVMALREILTHQGASAGV 344


>emb|CBI40030.3| unnamed protein product [Vitis vinifera]
          Length = 1884

 Score =  407 bits (1047), Expect = e-111
 Identities = 213/353 (60%), Positives = 261/353 (73%), Gaps = 12/353 (3%)
 Frame = -3

Query: 1023 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKK------------ 880
            M+ QSSRLHRLLTLLDTGSTQATR  AA QIG IAK+HPQDL+S L+K            
Sbjct: 1    MSHQSSRLHRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLNSLLRKEASRYSLLKSST 60

Query: 879  VSVYLRSKNWDTRVXXXXXXXXXAQNVVHTSLQELFASVEAELLAAGISGNGEDVIMSWT 700
            VS YLRSKNWDTRV         A+NV H+SL ELFA V   +  AGISG  EDV+ +W 
Sbjct: 61   VSQYLRSKNWDTRVAAAHAIGAIAENVKHSSLSELFACVGKRMSEAGISGEVEDVV-AWP 119

Query: 699  NSHPDFVSGLSFRSFDLSKVLEFGALLASGGQEYDVASDGSKTPGERLARQKQNLRRRLG 520
            + HP  ++G  FRSFD++KVLEFGALLASGGQEYD+ASD +K P +RLARQKQNLRRRLG
Sbjct: 120  DYHPKIMAGSPFRSFDINKVLEFGALLASGGQEYDIASDNTKNPRDRLARQKQNLRRRLG 179

Query: 519  LDVCEQFMDVNDVIKDEDLLVNKFSSHENGVGHRSYIFQHGNQIQQLVANIVPTFLSKRP 340
            LD+CEQFMDVND+I+DEDL+V+KF+   NG+ +R    Q  + IQ+LVAN+VPT +SKRP
Sbjct: 180  LDMCEQFMDVNDMIRDEDLIVHKFNPQGNGIDNRFNNSQSVHSIQRLVANMVPTIISKRP 239

Query: 339  SARELNLLKRKAKINAKDQTKSWCDAAESEAPHSQSLVLPKVTCPDPISSNKXXXXXXXX 160
            SARELNLLKRKAKIN+KDQTK W +  ++    ++ L  PK +CP+ + S+K        
Sbjct: 240  SARELNLLKRKAKINSKDQTKGWSEDGDT----AEVLTTPKESCPESLHSDKVFMDPIVD 295

Query: 159  XXXXXXDGEGQWPFQNFVEQLILDMFDPNWEVRHGSMMALREIITHHGGSSGV 1
                  DG+G+WPF +FVEQL+LDMFDP WE+RHGS+MALREI+TH G S+G+
Sbjct: 296  EDNFDHDGDGRWPFHSFVEQLLLDMFDPVWEIRHGSVMALREILTHQGASAGL 348


>ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 2
            [Vitis vinifera]
          Length = 2089

 Score =  399 bits (1025), Expect = e-109
 Identities = 214/378 (56%), Positives = 261/378 (69%), Gaps = 37/378 (9%)
 Frame = -3

Query: 1023 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYLRSKNWDT 844
            M+ QSSRLHRLLTLLDTGSTQATR  AA QIG IAK+HPQDL+S L+KVS YLRSKNWDT
Sbjct: 1    MSHQSSRLHRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLNSLLRKVSQYLRSKNWDT 60

Query: 843  RVXXXXXXXXXAQNVVHTSLQELFASVEAELLAAGISGNGEDVIMSWTNSHPDFVSGLSF 664
            RV         A+NV H+SL ELFA V   +  AGISG  EDV+ +W + HP  ++G  F
Sbjct: 61   RVAAAHAIGAIAENVKHSSLSELFACVGKRMSEAGISGEVEDVV-AWPDYHPKIMAGSPF 119

Query: 663  RSFDLSKVLEFGALLASGGQ-------------------------------------EYD 595
            RSFD++KVLEFGALLASGGQ                                     EYD
Sbjct: 120  RSFDINKVLEFGALLASGGQVMLFFFLTKALECQSIWVQPRKCFPEIKLWSLEKFYIEYD 179

Query: 594  VASDGSKTPGERLARQKQNLRRRLGLDVCEQFMDVNDVIKDEDLLVNKFSSHENGVGHRS 415
            +ASD +K P +RLARQKQNLRRRLGLD+CEQFMDVND+I+DEDL+V+KF+   NG+ +R 
Sbjct: 180  IASDNTKNPRDRLARQKQNLRRRLGLDMCEQFMDVNDMIRDEDLIVHKFNPQGNGIDNRF 239

Query: 414  YIFQHGNQIQQLVANIVPTFLSKRPSARELNLLKRKAKINAKDQTKSWCDAAESEAPHSQ 235
               Q  + IQ+LVAN+VPT +SKRPSARELNLLKRKAKIN+KDQTK W +  ++    ++
Sbjct: 240  NNSQSVHSIQRLVANMVPTIISKRPSARELNLLKRKAKINSKDQTKGWSEDGDT----AE 295

Query: 234  SLVLPKVTCPDPISSNKXXXXXXXXXXXXXXDGEGQWPFQNFVEQLILDMFDPNWEVRHG 55
             L  PK +CP+ + S+K              DG+G+WPF +FVEQL+LDMFDP WE+RHG
Sbjct: 296  VLTTPKESCPESLHSDKVFMDPIVDEDNFDHDGDGRWPFHSFVEQLLLDMFDPVWEIRHG 355

Query: 54   SMMALREIITHHGGSSGV 1
            S+MALREI+TH G S+GV
Sbjct: 356  SVMALREILTHQGASAGV 373