BLASTX nr result

ID: Coptis24_contig00018221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018221
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA55414.1| TPA: hypothetical protein ZEAMMB73_434286 [Zea m...    72   6e-11
tpg|DAA55413.1| TPA: hypothetical protein ZEAMMB73_434286 [Zea m...    72   6e-11
ref|NP_001130611.1| uncharacterized protein LOC100191710 [Zea ma...    72   6e-11
gb|AFW56420.1| hypothetical protein ZEAMMB73_154486 [Zea mays]         69   4e-10
gb|AFW56419.1| hypothetical protein ZEAMMB73_154486 [Zea mays]         69   4e-10

>tpg|DAA55414.1| TPA: hypothetical protein ZEAMMB73_434286 [Zea mays]
          Length = 480

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = +1

Query: 253 MDNKKSHVRLRVRVTAKKRGRDXXXXXXXXXXXVRKFR-DTEIFNSVKKLQRREIGGLRN 429
           MD  K H+R+R+RVTA++RG              RK R +T + NS  KLQRREIGG + 
Sbjct: 1   MDGPKRHLRVRLRVTARRRGAYGDGAGGALGPRRRKCRMETPVLNSAAKLQRREIGGRQL 60

Query: 430 ICSGASSKAQ--EKFRNFQLQEEFDTY 504
              G    A   E+FRN QLQEEFDTY
Sbjct: 61  AARGGGPAAAVPERFRNMQLQEEFDTY 87


>tpg|DAA55413.1| TPA: hypothetical protein ZEAMMB73_434286 [Zea mays]
          Length = 483

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = +1

Query: 253 MDNKKSHVRLRVRVTAKKRGRDXXXXXXXXXXXVRKFR-DTEIFNSVKKLQRREIGGLRN 429
           MD  K H+R+R+RVTA++RG              RK R +T + NS  KLQRREIGG + 
Sbjct: 1   MDGPKRHLRVRLRVTARRRGAYGDGAGGALGPRRRKCRMETPVLNSAAKLQRREIGGRQL 60

Query: 430 ICSGASSKAQ--EKFRNFQLQEEFDTY 504
              G    A   E+FRN QLQEEFDTY
Sbjct: 61  AARGGGPAAAVPERFRNMQLQEEFDTY 87


>ref|NP_001130611.1| uncharacterized protein LOC100191710 [Zea mays]
           gi|194689632|gb|ACF78900.1| unknown [Zea mays]
          Length = 281

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = +1

Query: 253 MDNKKSHVRLRVRVTAKKRGRDXXXXXXXXXXXVRKFR-DTEIFNSVKKLQRREIGGLRN 429
           MD  K H+R+R+RVTA++RG              RK R +T + NS  KLQRREIGG + 
Sbjct: 1   MDGPKRHLRVRLRVTARRRGAYGDGAGGALGPRRRKCRMETPVLNSAAKLQRREIGGRQL 60

Query: 430 ICSGASSKAQ--EKFRNFQLQEEFDTY 504
              G    A   E+FRN QLQEEFDTY
Sbjct: 61  AARGGGPAAAVPERFRNMQLQEEFDTY 87


>gb|AFW56420.1| hypothetical protein ZEAMMB73_154486 [Zea mays]
          Length = 473

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
 Frame = +1

Query: 262 KKSHVRLRVRVTAKKRGRDXXXXXXXXXXXVRKFR-DTEIFNSVKKLQRREIGGLRNICS 438
           K+S +R+R+RVTA++RG D            RK R +  + NSV KLQRREIGG +    
Sbjct: 5   KRSQLRVRLRVTARRRGADGDGAGGAAGPGGRKRRMEAPVRNSVAKLQRREIGGRQLAAR 64

Query: 439 GASSKAQ--EKFRNFQLQEEFDTY 504
           G    A   E+FRN QLQEEFDTY
Sbjct: 65  GGGPAAAVPERFRNMQLQEEFDTY 88


>gb|AFW56419.1| hypothetical protein ZEAMMB73_154486 [Zea mays]
          Length = 307

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
 Frame = +1

Query: 262 KKSHVRLRVRVTAKKRGRDXXXXXXXXXXXVRKFR-DTEIFNSVKKLQRREIGGLRNICS 438
           K+S +R+R+RVTA++RG D            RK R +  + NSV KLQRREIGG +    
Sbjct: 5   KRSQLRVRLRVTARRRGADGDGAGGAAGPGGRKRRMEAPVRNSVAKLQRREIGGRQLAAR 64

Query: 439 GASSKAQ--EKFRNFQLQEEFDTY 504
           G    A   E+FRN QLQEEFDTY
Sbjct: 65  GGGPAAAVPERFRNMQLQEEFDTY 88


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