BLASTX nr result

ID: Coptis24_contig00018220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018220
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279192.1| PREDICTED: leucine-rich repeat extensin-like...   546   e-153
ref|XP_002517082.1| serine-threonine protein kinase, plant-type,...   500   e-139
ref|XP_004134434.1| PREDICTED: leucine-rich repeat extensin-like...   498   e-138
ref|XP_002314669.1| predicted protein [Populus trichocarpa] gi|2...   491   e-136
gb|ACU18125.1| unknown [Glycine max]                                  490   e-136

>ref|XP_002279192.1| PREDICTED: leucine-rich repeat extensin-like protein 6-like [Vitis
            vinifera]
          Length = 394

 Score =  546 bits (1407), Expect = e-153
 Identities = 253/327 (77%), Positives = 288/327 (88%)
 Frame = +2

Query: 2    PNPRLLKAFDALQAWKHVIVSDPKKFTSNWYGLDVCNYNGVYCAPAPDDRHITTVAGIDL 181
            PNPR+L A+ ALQAWKHVI+SDPK FTSNW G DVCNY GVYCAPAPDD HITTVAGIDL
Sbjct: 39   PNPRILNAYTALQAWKHVILSDPKNFTSNWCGFDVCNYKGVYCAPAPDDPHITTVAGIDL 98

Query: 182  NHGNIGGSLPEELGLLTDLAVFHINSNRFCGIIPKSFQNLRLLYELDVSNNLFAGQFPEV 361
            NH +I GSLPEELGLLTDLA+FHINSNRFCG +P SF++LRLLYELD+SNN F GQFP V
Sbjct: 99   NHADIAGSLPEELGLLTDLALFHINSNRFCGTLPDSFRHLRLLYELDISNNRFKGQFPSV 158

Query: 362  VLCLSSLKFLDIRYNDFKGDVPNKLFDMKLDALFLNNNKFRFSLPSNIGNSPVSVLVLAN 541
            VLCL SLKFLDIRYN+F+GD+P  LFD+KLDA+F+NNNKF+ SLP NIGNSPVSV+V AN
Sbjct: 159  VLCLPSLKFLDIRYNEFEGDIPTGLFDLKLDAIFVNNNKFKSSLPGNIGNSPVSVIVFAN 218

Query: 542  NDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKNLTVFDVSRNKLVGSLPETM 721
            N+L+GC PSSL+++  TLNE+I+ N+G+ GCL PEIGLLKN+TVFDVS N+LVG LPET+
Sbjct: 219  NNLNGCLPSSLSKMAKTLNELIITNAGLKGCLSPEIGLLKNVTVFDVSSNELVGPLPETI 278

Query: 722  GNMKSLEQLNVADNKLSGEIPASICSLPNLENFTYSNNYFCGEPQSCLKLPDKDDKKNCI 901
            G MKSLEQLNVA NKLSGEIP +ICSLPNLENFTYS NYFCGEP +CLKLP  DD+KNCI
Sbjct: 279  GEMKSLEQLNVAHNKLSGEIPETICSLPNLENFTYSYNYFCGEPPTCLKLPANDDQKNCI 338

Query: 902  PDRPLQRSAEECASFLSHPADCNAFGC 982
            PDRP+QRS EECA+FL+ P DC AFGC
Sbjct: 339  PDRPMQRSPEECAAFLAQPVDCGAFGC 365


>ref|XP_002517082.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223543717|gb|EEF45245.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 356

 Score =  500 bits (1287), Expect = e-139
 Identities = 234/319 (73%), Positives = 271/319 (84%)
 Frame = +2

Query: 2   PNPRLLKAFDALQAWKHVIVSDPKKFTSNWYGLDVCNYNGVYCAPAPDDRHITTVAGIDL 181
           P+PRLLKA+ ALQAWKH I SDPK FTSNWYG DVC+Y GVYCAPA DD H  TVAGIDL
Sbjct: 36  PSPRLLKAYIALQAWKHAITSDPKNFTSNWYGPDVCSYTGVYCAPALDDPHTITVAGIDL 95

Query: 182 NHGNIGGSLPEELGLLTDLAVFHINSNRFCGIIPKSFQNLRLLYELDVSNNLFAGQFPEV 361
           NH NI GSLPE+LGLLTDLA+FH+NSNRFCG IP SF++LRLLYE D+SNN F+G+ P V
Sbjct: 96  NHANIAGSLPEDLGLLTDLALFHLNSNRFCGTIPDSFRHLRLLYEFDISNNQFSGELPPV 155

Query: 362 VLCLSSLKFLDIRYNDFKGDVPNKLFDMKLDALFLNNNKFRFSLPSNIGNSPVSVLVLAN 541
           +LCL+SLKFLD+RYN+F G+VP+KLFD+KLDALF+NNNKF+ SLP N GNSPVSV+VLAN
Sbjct: 156 LLCLTSLKFLDVRYNEFYGNVPSKLFDLKLDALFINNNKFKSSLPENFGNSPVSVIVLAN 215

Query: 542 NDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKNLTVFDVSRNKLVGSLPETM 721
           ND+SGC PSSL ++G TL +IIL N G+ GC+  +IGLL  +TVFDVS NKLVGSLP++M
Sbjct: 216 NDISGCIPSSLTKMGRTLKQIILTNMGLNGCIQSDIGLLNQVTVFDVSFNKLVGSLPDSM 275

Query: 722 GNMKSLEQLNVADNKLSGEIPASICSLPNLENFTYSNNYFCGEPQSCLKLPDKDDKKNCI 901
           G MKSLEQLNVA NKLSG IP SIC LP LENFTYS+NYFCGEP  CLKL  KDD++NCI
Sbjct: 276 GEMKSLEQLNVAHNKLSGNIPESICLLPRLENFTYSDNYFCGEPPVCLKLQAKDDRRNCI 335

Query: 902 PDRPLQRSAEECASFLSHP 958
           P RPLQRS EEC +F ++P
Sbjct: 336 PHRPLQRSPEECKAFYAYP 354


>ref|XP_004134434.1| PREDICTED: leucine-rich repeat extensin-like protein 6-like [Cucumis
            sativus] gi|449518721|ref|XP_004166385.1| PREDICTED:
            leucine-rich repeat extensin-like protein 6-like [Cucumis
            sativus]
          Length = 376

 Score =  498 bits (1281), Expect = e-138
 Identities = 232/328 (70%), Positives = 270/328 (82%)
 Frame = +2

Query: 2    PNPRLLKAFDALQAWKHVIVSDPKKFTSNWYGLDVCNYNGVYCAPAPDDRHITTVAGIDL 181
            PNPRLLKA+ ALQAWKH I  DP  FT+NWYG DVCNY+GV+CAPA DD  I TVAGIDL
Sbjct: 38   PNPRLLKAYTALQAWKHAITEDPSNFTANWYGPDVCNYSGVFCAPALDDPDIRTVAGIDL 97

Query: 182  NHGNIGGSLPEELGLLTDLAVFHINSNRFCGIIPKSFQNLRLLYELDVSNNLFAGQFPEV 361
            NHGNI G+LP++LGLLTDLA+FHINSNRFCG IP SF+ L LL+ELD+SNN F+G+FP V
Sbjct: 98   NHGNISGTLPDDLGLLTDLALFHINSNRFCGTIPNSFRCLTLLFELDISNNDFSGEFPSV 157

Query: 362  VLCLSSLKFLDIRYNDFKGDVPNKLFDMKLDALFLNNNKFRFSLPSNIGNSPVSVLVLAN 541
            +L L +LKFLDIR+N F GDVP+ LF++KLDALF+NNN F FSLP NIGNSPVSVLV AN
Sbjct: 158  ILSLPALKFLDIRFNKFSGDVPSSLFELKLDALFINNNDFNFSLPENIGNSPVSVLVFAN 217

Query: 542  NDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKNLTVFDVSRNKLVGSLPETM 721
            N+++GC PSS++ +  TLNEII+  SG+ GCLP EIG L NLTVFDVS N LVG LPETM
Sbjct: 218  NNINGCLPSSISNMNTTLNEIIITGSGLIGCLPSEIGSLSNLTVFDVSDNNLVGPLPETM 277

Query: 722  GNMKSLEQLNVADNKLSGEIPASICSLPNLENFTYSNNYFCGEPQSCLKLPDKDDKKNCI 901
              MK LEQLNVA N+LSGEIPASICSLP L+NFT+S N+FC EP  CLKL   DD+KNC+
Sbjct: 278  AGMKKLEQLNVAHNQLSGEIPASICSLPKLQNFTFSYNFFCSEPPVCLKLQASDDQKNCL 337

Query: 902  PDRPLQRSAEECASFLSHPADCNAFGCS 985
            PDRP QRS EEC +F S+P DC+ FGC+
Sbjct: 338  PDRPFQRSPEECKAFYSNPVDCSVFGCT 365


>ref|XP_002314669.1| predicted protein [Populus trichocarpa] gi|222863709|gb|EEF00840.1|
            predicted protein [Populus trichocarpa]
          Length = 349

 Score =  491 bits (1265), Expect = e-136
 Identities = 236/328 (71%), Positives = 268/328 (81%)
 Frame = +2

Query: 2    PNPRLLKAFDALQAWKHVIVSDPKKFTSNWYGLDVCNYNGVYCAPAPDDRHITTVAGIDL 181
            PNPRLLKA+ ALQAWKH I SDPK FTSNW G +VCNY GVYCAPAPDDR   TVAGIDL
Sbjct: 17   PNPRLLKAYIALQAWKHAITSDPKNFTSNWCGPNVCNYTGVYCAPAPDDRDTLTVAGIDL 76

Query: 182  NHGNIGGSLPEELGLLTDLAVFHINSNRFCGIIPKSFQNLRLLYELDVSNNLFAGQFPEV 361
            NH  I GSLPE+LGLLTDLA+FHINSNRF G IP SF  L LLYELDVSNN F+G+FP V
Sbjct: 77   NHAKIAGSLPEDLGLLTDLALFHINSNRFFGSIPGSFCELNLLYELDVSNNQFSGKFPSV 136

Query: 362  VLCLSSLKFLDIRYNDFKGDVPNKLFDMKLDALFLNNNKFRFSLPSNIGNSPVSVLVLAN 541
            VL L SLKFLDIRYN+F+G +P+KLFD  LDALF+NNNKF+ S+P N+G SPVSV+VLAN
Sbjct: 137  VLSLPSLKFLDIRYNEFRGKIPSKLFDKNLDALFINNNKFQSSVPKNLGKSPVSVIVLAN 196

Query: 542  NDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKNLTVFDVSRNKLVGSLPETM 721
            N+ + CFPSSL ++  TL+EIIL N G+TGCLP +IGL+  LTVFDVS NKLVGSLPE++
Sbjct: 197  NNFNSCFPSSLTKMAGTLDEIILTNMGLTGCLPSDIGLMNQLTVFDVSSNKLVGSLPESI 256

Query: 722  GNMKSLEQLNVADNKLSGEIPASICSLPNLENFTYSNNYFCGEPQSCLKLPDKDDKKNCI 901
            G+MK LEQLNVA N L G+IP SIC LP LENFTYS NYFCGEP +CLKL  KDD +NCI
Sbjct: 257  GDMKKLEQLNVAHNMLYGDIPRSICLLPRLENFTYSYNYFCGEPPACLKLQAKDDTENCI 316

Query: 902  PDRPLQRSAEECASFLSHPADCNAFGCS 985
            P RPLQRS +EC SF + P  C+A GCS
Sbjct: 317  PYRPLQRSPQECKSFYAFPPSCSASGCS 344


>gb|ACU18125.1| unknown [Glycine max]
          Length = 390

 Score =  490 bits (1261), Expect = e-136
 Identities = 229/327 (70%), Positives = 268/327 (81%)
 Frame = +2

Query: 5    NPRLLKAFDALQAWKHVIVSDPKKFTSNWYGLDVCNYNGVYCAPAPDDRHITTVAGIDLN 184
            NPRL KA+ ALQAWKH I SDPK FT NW G +VCNY G+YCAPA DD HI TVAG+DLN
Sbjct: 42   NPRLTKAYTALQAWKHKITSDPKNFTLNWCGPNVCNYTGIYCAPALDDPHIYTVAGVDLN 101

Query: 185  HGNIGGSLPEELGLLTDLAVFHINSNRFCGIIPKSFQNLRLLYELDVSNNLFAGQFPEVV 364
            H  I GSLPEELGLLTDL++ HINSNRFCG +P SF  L LL+ELD+SNN F+G FPEVV
Sbjct: 102  HATISGSLPEELGLLTDLSLLHINSNRFCGSLPTSFDKLHLLHELDISNNQFSGPFPEVV 161

Query: 365  LCLSSLKFLDIRYNDFKGDVPNKLFDMKLDALFLNNNKFRFSLPSNIGNSPVSVLVLANN 544
            LC+ +LK+LDIR+N+F G+VP++LFD+KLDALF+NNN F+FSLP+N GNS  SV+V ANN
Sbjct: 162  LCIPNLKYLDIRFNNFHGNVPSRLFDVKLDALFINNNNFQFSLPNNFGNSTASVVVFANN 221

Query: 545  DLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKNLTVFDVSRNKLVGSLPETMG 724
            DL GC PSSL ++  TLNEII+ NSG+TGCLP EIG L  +TVFDVS NKLVG LPE++G
Sbjct: 222  DLKGCLPSSLVKMKGTLNEIIITNSGLTGCLPSEIGDLDMVTVFDVSFNKLVGELPESLG 281

Query: 725  NMKSLEQLNVADNKLSGEIPASICSLPNLENFTYSNNYFCGEPQSCLKLPDKDDKKNCIP 904
             MK LEQLNVA+N+LSGEIP S+C LP LENFTYS NYFC E  +CLKL DKDD KNCIP
Sbjct: 282  RMKKLEQLNVANNELSGEIPESVCMLPRLENFTYSYNYFCSESPTCLKLKDKDDTKNCIP 341

Query: 905  DRPLQRSAEECASFLSHPADCNAFGCS 985
             RPLQRS +EC +F +HP  C+AFGC+
Sbjct: 342  YRPLQRSLDECKAFYAHPVHCSAFGCA 368


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