BLASTX nr result

ID: Coptis24_contig00018219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018219
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150374.1| PREDICTED: acyl-CoA-binding domain-containin...   146   5e-33
ref|XP_002316404.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32
ref|XP_002264719.1| PREDICTED: acyl-CoA-binding domain-containin...   144   2e-32
ref|XP_003638173.1| RNA-binding protein Nova-1, partial [Medicag...   139   9e-31
ref|XP_003638171.1| RNA-binding protein Nova-1, partial [Medicag...   137   3e-30

>ref|XP_004150374.1| PREDICTED: acyl-CoA-binding domain-containing protein 4-like
           [Cucumis sativus] gi|449523517|ref|XP_004168770.1|
           PREDICTED: acyl-CoA-binding domain-containing protein
           4-like [Cucumis sativus]
          Length = 509

 Score =  146 bits (369), Expect = 5e-33
 Identities = 81/145 (55%), Positives = 105/145 (72%)
 Frame = +1

Query: 61  KKLELTNIENETFKGVQNGSSQQGLTVDVNAIAADKTKLELSLSEVRTENVKLKGTLNEM 240
           +KL+ + IE  +    QN S   G  +++ AI  +K KLEL+LSEV++EN KLK  ++E+
Sbjct: 364 EKLDFSMIEGVSNGRHQNHSQPNG-AIELKAIREEKAKLELTLSEVQSENSKLKQEIDEV 422

Query: 241 NETHDELSKELLSVRGQLTAEMSRCFKLEVQIANLQKSLESLQSIEDELKVLRKQRSALE 420
           N TH ELSKEL SV+ QL AE SRCFKLE QIA LQK LES+QSIE+E+ +LR+Q+SALE
Sbjct: 423 NSTHAELSKELQSVQSQLIAERSRCFKLEAQIAELQKMLESMQSIENEIHLLREQKSALE 482

Query: 421 EDMDFGAAGDPQRQNPGGVWQWIGG 495
           + M+  AA   QRQ  GGVW+WI G
Sbjct: 483 KHME--AASTVQRQGSGGVWRWIAG 505


>ref|XP_002316404.1| predicted protein [Populus trichocarpa] gi|222865444|gb|EEF02575.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  144 bits (364), Expect = 2e-32
 Identities = 78/145 (53%), Positives = 107/145 (73%)
 Frame = +1

Query: 61  KKLELTNIENETFKGVQNGSSQQGLTVDVNAIAADKTKLELSLSEVRTENVKLKGTLNEM 240
           +KL+ +++ N    GV N  S+  L  +++A+  +K +LEL L+EVR EN +L   ++E+
Sbjct: 372 EKLDFSSL-NLNSNGVGNNPSELDLAFEIDALKEEKKELELFLTEVRAENSRLTEKVDEV 430

Query: 241 NETHDELSKELLSVRGQLTAEMSRCFKLEVQIANLQKSLESLQSIEDELKVLRKQRSALE 420
           N TH ELSKEL SV+GQL AE SRCFKLE QIA LQK LESLQSIE+E+++LR+Q+SALE
Sbjct: 431 NGTHAELSKELHSVQGQLAAERSRCFKLEAQIAELQKILESLQSIENEVQLLRRQKSALE 490

Query: 421 EDMDFGAAGDPQRQNPGGVWQWIGG 495
           ++++  AA   QRQ  GGVW+WI G
Sbjct: 491 QEIERSAA---QRQGSGGVWRWIAG 512


>ref|XP_002264719.1| PREDICTED: acyl-CoA-binding domain-containing protein 4 [Vitis
           vinifera] gi|296085942|emb|CBI31383.3| unnamed protein
           product [Vitis vinifera]
          Length = 508

 Score =  144 bits (364), Expect = 2e-32
 Identities = 74/146 (50%), Positives = 104/146 (71%)
 Frame = +1

Query: 61  KKLELTNIENETFKGVQNGSSQQGLTVDVNAIAADKTKLELSLSEVRTENVKLKGTLNEM 240
           +KL+    E+  F GV+  +S Q  ++++NAI  +   LE S++EV+ EN +LK  ++++
Sbjct: 363 EKLDFIETEDSNFGGVKENNSAQDFSIEINAIREENKVLESSVAEVKAENSRLKEKIDDI 422

Query: 241 NETHDELSKELLSVRGQLTAEMSRCFKLEVQIANLQKSLESLQSIEDELKVLRKQRSALE 420
           N T+ ELSKEL SV+GQL  E SRC KLE QIA LQK LE+LQSIEDE+++LR+Q+S LE
Sbjct: 423 NGTYAELSKELHSVQGQLVVERSRCSKLEAQIAELQKMLETLQSIEDEVQLLRRQKSMLE 482

Query: 421 EDMDFGAAGDPQRQNPGGVWQWIGGS 498
            +M+  AA   QRQ  GGVW+WI G+
Sbjct: 483 RNMEVAAA---QRQGSGGVWRWIAGT 505


>ref|XP_003638173.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
           gi|355504108|gb|AES85311.1| RNA-binding protein Nova-1,
           partial [Medicago truncatula]
          Length = 157

 Score =  139 bits (350), Expect = 9e-31
 Identities = 73/150 (48%), Positives = 103/150 (68%)
 Frame = +1

Query: 49  SKGEKKLELTNIENETFKGVQNGSSQQGLTVDVNAIAADKTKLELSLSEVRTENVKLKGT 228
           SK EK L+   +++   K   NG  Q  +T+ + AI  +K  LELS++EVR EN KL G 
Sbjct: 9   SKSEK-LDFMQLDDINTKSSVNGHHQTDVTIKIEAIKEEKRLLELSITEVRAENSKLGGE 67

Query: 229 LNEMNETHDELSKELLSVRGQLTAEMSRCFKLEVQIANLQKSLESLQSIEDELKVLRKQR 408
           ++E+N  H EL+KEL SV+GQL AE SRCF LE +I  LQK LES+QS+ED+++ LR+++
Sbjct: 68  IHEVNNNHAELTKELQSVQGQLVAERSRCFNLEAKITELQKLLESMQSVEDQVQALRQKK 127

Query: 409 SALEEDMDFGAAGDPQRQNPGGVWQWIGGS 498
           SA +++M+  A    QRQ+ GGVW+  GGS
Sbjct: 128 SAFDQEMEHAATA--QRQSSGGVWRLFGGS 155


>ref|XP_003638171.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
           gi|355504106|gb|AES85309.1| RNA-binding protein Nova-1,
           partial [Medicago truncatula]
          Length = 161

 Score =  137 bits (346), Expect = 3e-30
 Identities = 72/149 (48%), Positives = 102/149 (68%)
 Frame = +1

Query: 49  SKGEKKLELTNIENETFKGVQNGSSQQGLTVDVNAIAADKTKLELSLSEVRTENVKLKGT 228
           SK EK L+   +++   K   NG  Q  +T+ + AI  +K  LELS++EVR EN KL G 
Sbjct: 9   SKSEK-LDFMQLDDINTKSSVNGHHQTDVTIKIEAIKEEKRLLELSITEVRAENSKLGGE 67

Query: 229 LNEMNETHDELSKELLSVRGQLTAEMSRCFKLEVQIANLQKSLESLQSIEDELKVLRKQR 408
           ++E+N  H EL+KEL SV+GQL AE SRCF LE +I  LQK LES+QS+ED+++ LR+++
Sbjct: 68  IHEVNNNHAELTKELQSVQGQLVAERSRCFNLEAKITELQKLLESMQSVEDQVQALRQKK 127

Query: 409 SALEEDMDFGAAGDPQRQNPGGVWQWIGG 495
           SA +++M+  A    QRQ+ GGVW+  GG
Sbjct: 128 SAFDQEMEHAATA--QRQSSGGVWRLFGG 154


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