BLASTX nr result

ID: Coptis24_contig00018214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018214
         (1623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14997.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_002278631.1| PREDICTED: uncharacterized protein LOC100251...   384   e-104
ref|XP_002511368.1| conserved hypothetical protein [Ricinus comm...   379   e-102
ref|XP_002318085.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101
gb|AFK46605.1| unknown [Medicago truncatula]                          365   2e-98

>emb|CBI14997.3| unnamed protein product [Vitis vinifera]
          Length = 356

 Score =  384 bits (985), Expect = e-104
 Identities = 205/299 (68%), Positives = 236/299 (78%), Gaps = 5/299 (1%)
 Frame = -2

Query: 1388 KRQPVLLAATEDHSSENELTSHYLEQDD---DAENXXXXXXXXXXXERTVGKPGFISFHG 1218
            KRQ +L A +ED S  +EL     EQ++   +AE            E T GKPG ISF+ 
Sbjct: 56   KRQAILFATSEDQSPSDELKPDTSEQEEYHPNAEGIPSASITYFHSEGTGGKPGLISFYN 115

Query: 1217 RSIEKREE--MHEPPLGKHQSNLIFFMGPSVLVASFIFPSLYLRKILSSIFEDSLLTDFL 1044
            R  ++ +E  +  PP  ++Q+NL++F+GPS+LVASFIFPSLYLR+ILS++FEDSLLTDFL
Sbjct: 116  RPYKRADEDLISGPP--RNQNNLLWFIGPSILVASFIFPSLYLRRILSTVFEDSLLTDFL 173

Query: 1043 ILFFTEVLFYFGVAVFLLLIDRLQKPPELIYSPKGSGSQTTQLVHRISSVATLVLSLIIP 864
            ILFFTE LFY GVAVFLLLIDRL++  E +           QL HRI+S A LVLSLIIP
Sbjct: 174  ILFFTEALFYCGVAVFLLLIDRLRRSLEPVSDTNSHRIPAPQLGHRIASGAALVLSLIIP 233

Query: 863  MVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYAKYVKSRSWPVIPIIFQVYRLHQLN 684
            MVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYA+Y+KS SWPVIP++FQVYRLHQLN
Sbjct: 234  MVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYIKSPSWPVIPVVFQVYRLHQLN 293

Query: 683  RAAQLVTALSFTVRGAETTSHNLAINRSLGTLLNVLQFLGVICIWSLASFLTRFLPSAT 507
            RAAQLVTALSFTVRGAE T+HNLAIN SLGTLLNVLQFLGVICIWSL+SFL RF PSAT
Sbjct: 294  RAAQLVTALSFTVRGAEMTTHNLAINSSLGTLLNVLQFLGVICIWSLSSFLMRFFPSAT 352


>ref|XP_002278631.1| PREDICTED: uncharacterized protein LOC100251871 [Vitis vinifera]
          Length = 319

 Score =  384 bits (985), Expect = e-104
 Identities = 205/299 (68%), Positives = 236/299 (78%), Gaps = 5/299 (1%)
 Frame = -2

Query: 1388 KRQPVLLAATEDHSSENELTSHYLEQDD---DAENXXXXXXXXXXXERTVGKPGFISFHG 1218
            KRQ +L A +ED S  +EL     EQ++   +AE            E T GKPG ISF+ 
Sbjct: 19   KRQAILFATSEDQSPSDELKPDTSEQEEYHPNAEGIPSASITYFHSEGTGGKPGLISFYN 78

Query: 1217 RSIEKREE--MHEPPLGKHQSNLIFFMGPSVLVASFIFPSLYLRKILSSIFEDSLLTDFL 1044
            R  ++ +E  +  PP  ++Q+NL++F+GPS+LVASFIFPSLYLR+ILS++FEDSLLTDFL
Sbjct: 79   RPYKRADEDLISGPP--RNQNNLLWFIGPSILVASFIFPSLYLRRILSTVFEDSLLTDFL 136

Query: 1043 ILFFTEVLFYFGVAVFLLLIDRLQKPPELIYSPKGSGSQTTQLVHRISSVATLVLSLIIP 864
            ILFFTE LFY GVAVFLLLIDRL++  E +           QL HRI+S A LVLSLIIP
Sbjct: 137  ILFFTEALFYCGVAVFLLLIDRLRRSLEPVSDTNSHRIPAPQLGHRIASGAALVLSLIIP 196

Query: 863  MVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYAKYVKSRSWPVIPIIFQVYRLHQLN 684
            MVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYA+Y+KS SWPVIP++FQVYRLHQLN
Sbjct: 197  MVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYIKSPSWPVIPVVFQVYRLHQLN 256

Query: 683  RAAQLVTALSFTVRGAETTSHNLAINRSLGTLLNVLQFLGVICIWSLASFLTRFLPSAT 507
            RAAQLVTALSFTVRGAE T+HNLAIN SLGTLLNVLQFLGVICIWSL+SFL RF PSAT
Sbjct: 257  RAAQLVTALSFTVRGAEMTTHNLAINSSLGTLLNVLQFLGVICIWSLSSFLMRFFPSAT 315


>ref|XP_002511368.1| conserved hypothetical protein [Ricinus communis]
            gi|223550483|gb|EEF51970.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 367

 Score =  379 bits (972), Expect = e-102
 Identities = 200/295 (67%), Positives = 234/295 (79%), Gaps = 3/295 (1%)
 Frame = -2

Query: 1385 RQPVLLAATEDHSSENELTSHYLEQDDD---AENXXXXXXXXXXXERTVGKPGFISFHGR 1215
            RQ V  AA++D + ++EL S  LE +D    AEN           + T GKPG +SF+ R
Sbjct: 69   RQYVSHAASQDQAQDSELQSDELEPEDHNSTAENLAPTSSFFNHLQGTDGKPGLVSFYNR 128

Query: 1214 SIEKREEMHEPPLGKHQSNLIFFMGPSVLVASFIFPSLYLRKILSSIFEDSLLTDFLILF 1035
              +  +++ +  + K+QS+L++F GPSVLVASFIFPSLYLR+ILS++FEDSLLTDFLILF
Sbjct: 129  PYKMEDDVSKTNVQKNQSSLLWFAGPSVLVASFIFPSLYLRRILSTVFEDSLLTDFLILF 188

Query: 1034 FTEVLFYFGVAVFLLLIDRLQKPPELIYSPKGSGSQTTQLVHRISSVATLVLSLIIPMVT 855
            FTE LFY GVAVFLLLID+L++P E   +  G  +   QL  RISSVA LVLSLIIP+VT
Sbjct: 189  FTEALFYSGVAVFLLLIDQLRRPMEAESAANGGTNLAPQLGQRISSVAALVLSLIIPLVT 248

Query: 854  MGLVWPWTGPAASATLAPYLVGIVVQFAFEQYAKYVKSRSWPVIPIIFQVYRLHQLNRAA 675
            MG VWPWTGPAASATLAPYLVGIVVQFAFEQYAKY KS +WP+IPIIFQVYRLHQLNRAA
Sbjct: 249  MGFVWPWTGPAASATLAPYLVGIVVQFAFEQYAKYRKSPAWPIIPIIFQVYRLHQLNRAA 308

Query: 674  QLVTALSFTVRGAETTSHNLAINRSLGTLLNVLQFLGVICIWSLASFLTRFLPSA 510
            QLVTALSFTV+GAE TSHNL I+ SLGTLLNVLQFLGVICIWSL+SFL +F PSA
Sbjct: 309  QLVTALSFTVKGAEMTSHNLEISSSLGTLLNVLQFLGVICIWSLSSFLMKFFPSA 363


>ref|XP_002318085.1| predicted protein [Populus trichocarpa] gi|222858758|gb|EEE96305.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  375 bits (962), Expect = e-101
 Identities = 200/298 (67%), Positives = 232/298 (77%), Gaps = 3/298 (1%)
 Frame = -2

Query: 1388 KRQPVLLAATEDHSSENELTSHYLEQDDD---AENXXXXXXXXXXXERTVGKPGFISFHG 1218
            +RQ ++ AA++D S  +E+     E++DD   AE              T GKPG ISF+ 
Sbjct: 29   RRQHIIFAASQDQSQYSEIKPDASEEEDDHPTAEALPTTSSSINHFPGTDGKPGLISFYN 88

Query: 1217 RSIEKREEMHEPPLGKHQSNLIFFMGPSVLVASFIFPSLYLRKILSSIFEDSLLTDFLIL 1038
            R  +  +E+    + ++ S+L++F+GP+VLVASFIFPSLYLRKILS++FEDSLLTDFLIL
Sbjct: 89   RPYKMVDEVIISNVQRNPSSLLWFIGPAVLVASFIFPSLYLRKILSAVFEDSLLTDFLIL 148

Query: 1037 FFTEVLFYFGVAVFLLLIDRLQKPPELIYSPKGSGSQTTQLVHRISSVATLVLSLIIPMV 858
            FFTE LFY GVAVFLLLID L++P E + S   + +    L  RISSVA LVLSLIIPMV
Sbjct: 149  FFTEALFYCGVAVFLLLIDHLRRPVEPLSSVNNNRTLAPHLGQRISSVAALVLSLIIPMV 208

Query: 857  TMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYAKYVKSRSWPVIPIIFQVYRLHQLNRA 678
            TMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYA+Y KS SWPVIPIIFQVYRLHQLNRA
Sbjct: 209  TMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSWPVIPIIFQVYRLHQLNRA 268

Query: 677  AQLVTALSFTVRGAETTSHNLAINRSLGTLLNVLQFLGVICIWSLASFLTRFLPSATR 504
            AQLVTALSFTVRGAE TSHNL I+ SLGTLLNVLQFLGVICIWSL+SFL +F P A R
Sbjct: 269  AQLVTALSFTVRGAEMTSHNLEISSSLGTLLNVLQFLGVICIWSLSSFLMKFFPPAAR 326


>gb|AFK46605.1| unknown [Medicago truncatula]
          Length = 376

 Score =  365 bits (937), Expect = 2e-98
 Identities = 194/297 (65%), Positives = 229/297 (77%), Gaps = 3/297 (1%)
 Frame = -2

Query: 1388 KRQPVLLAATEDHSSENELTSHYLEQDDD---AENXXXXXXXXXXXERTVGKPGFISFHG 1218
            K+Q  L   +ED S  NEL       +++   A++             + GKPGFISF+ 
Sbjct: 76   KQQNALFVVSEDQSQNNELEIPAPVPENNNNIAQDISPASNPSFHLSGSDGKPGFISFYN 135

Query: 1217 RSIEKREEMHEPPLGKHQSNLIFFMGPSVLVASFIFPSLYLRKILSSIFEDSLLTDFLIL 1038
            R   +  E+      + Q+N+++F+GP+VLVASFIFPSLYLRK+LS IFEDSLLTDFLIL
Sbjct: 136  RPYRRDSEILLLNSERSQNNILWFVGPAVLVASFIFPSLYLRKLLSIIFEDSLLTDFLIL 195

Query: 1037 FFTEVLFYFGVAVFLLLIDRLQKPPELIYSPKGSGSQTTQLVHRISSVATLVLSLIIPMV 858
            FFTE +FY GVAVFL L+D L++P +L  + K + +   QL  +ISSVATLVLSL+IPMV
Sbjct: 196  FFTEAIFYGGVAVFLFLLDHLRRPLQLDTATKNTDTLPPQLGQKISSVATLVLSLVIPMV 255

Query: 857  TMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYAKYVKSRSWPVIPIIFQVYRLHQLNRA 678
            TMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYA+Y KS SW  IP+IFQVYRLHQLNRA
Sbjct: 256  TMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSWSAIPLIFQVYRLHQLNRA 315

Query: 677  AQLVTALSFTVRGAETTSHNLAINRSLGTLLNVLQFLGVICIWSLASFLTRFLPSAT 507
            AQLVTALSFTVRGAE TSHN+AIN SLGTLLNVLQFLGVICIWSL+SFL RF+PSA+
Sbjct: 316  AQLVTALSFTVRGAELTSHNMAINSSLGTLLNVLQFLGVICIWSLSSFLMRFIPSAS 372


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