BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018204
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...   102   2e-19
ref|NP_567414.1| putative F-box/LRR-repeat protein [Arabidopsis ...    98   5e-18
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-17
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...    96   2e-17
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    94   5e-17

>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
            gi|222873903|gb|EEF11034.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score =  102 bits (255), Expect = 2e-19
 Identities = 101/348 (29%), Positives = 159/348 (45%), Gaps = 30/348 (8%)
 Frame = +2

Query: 179  SDEDIISSLPEQILHHILSYLDMKEVLLTSLLSTKWRNVWRSVPNLIFSESFWKDPVRKV 358
            ++ED IS+LP  +LHHILS++D  +V+ T +LS +W NVW+S P L F+   +   +   
Sbjct: 32   NNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSD 91

Query: 359  LV---LSKFIYFVDTVLLLRGGSNINKLSITSSKYNNLNQIQRLITYAVMRNAKEIHM-- 523
                 ++ F  F+  VL+ R      KLS+ + +    + ++ LI YAV  + +EI +  
Sbjct: 92   YYDDDMNNFTDFIYHVLVRRNNVKAFKLSLDTRRDCQYSVVESLIYYAVKHHVEEISINT 151

Query: 524  ----VGLDIYRAKPDLLSL------------------LARVNTLHLVSVRISSFDTQEWL 637
                V + + R   D  SL                  L  + TLHL   +  +FD +  +
Sbjct: 152  AHWDVPIVLPRCFFDCESLRSLKLKVDGGLALPKSLGLQSLKTLHLGGAQ--NFDGK--I 207

Query: 638  HLKSQSLENLIIED--CRGFRCLGIYTPQLKYLKVENSREEYNPSGL-IEIDAPKLTSLV 808
                 +LENL IED          I+   LK L++ N R      G  + + APKLTS  
Sbjct: 208  FSSCPNLENLTIEDICLNVIENFNIHALSLKSLEILNWRYNRIKQGCKVMLVAPKLTSFK 267

Query: 809  WKGYMYKDYIFSSPSSLVTVEVDTKINSVDEHEHLNTXXXXXXXXXXXXXAIPSPDVVFG 988
            + G      +F S  +L +++    +N V +  H +                   +   G
Sbjct: 268  FDG---NTPLFWSDVNLTSLD---DVNVVLQRYHHSHNYPFYVVEDEYISEEDETEQGLG 321

Query: 989  KCLRNILKELTNAKSLILSAHGFQTFSEVPDEINSLPSSFHNLKFLKL 1132
              L  +L +  +AKSL LS +  +  SEVP  ++  PS F NLK+LKL
Sbjct: 322  LNLIKMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKL 369


>ref|NP_567414.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|75318094|sp|O23257.1|FBL72_ARATH RecName:
            Full=Putative F-box/LRR-repeat protein At4g13960
            gi|2244752|emb|CAB10175.1| hypothetical protein
            [Arabidopsis thaliana] gi|7268100|emb|CAB78438.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332657951|gb|AEE83351.1| putative F-box/LRR-repeat
            protein [Arabidopsis thaliana]
          Length = 434

 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 105/360 (29%), Positives = 160/360 (44%), Gaps = 17/360 (4%)
 Frame = +2

Query: 188  DIISSLPEQILHHILSYLDMKEVLLTSLLSTKWRNVWRSVPNLIFSESFWKDPVR----K 355
            D +SSLP+++L+HILS+L  KE  LTS+LS +WRN++  VPNL   +S +  P      +
Sbjct: 2    DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKEDR 61

Query: 356  VLVLSKFIYFVDTVLLLRGGSNINKLSITSSKYNNLNQIQRLITYAVMRNAKEIHMVGLD 535
              +   F+ FVD VL L+G S I KLS+      + +++   I+ A+ R   E+      
Sbjct: 62   YEIQKSFMKFVDRVLALQGNSPIKKLSLKLRTGFDSHRVDGWISNALARGVTEL------ 115

Query: 536  IYRAKPDLLSLLARVNTLHLVSVRISSFDTQEWL---HLKSQSLENLIIEDCR------- 685
                  DLL +L  V TL L SVR+      +WL    +    L+ L++   R       
Sbjct: 116  ------DLLIILNLV-TLKLNSVRV------DWLAAGDIFLPMLKTLVLHSVRLCVDNVN 162

Query: 686  -GFRCLGIYTPQLKYLKVENSREEYNPS-GLIEIDAPKLTSLVWKGYMYKDYIFSSPSSL 859
             G + + +    LK L V      YN   G   +D P L    +  Y+  DY      +L
Sbjct: 163  WGGKDVNVSNASLKILTV-----NYNICLGTFSVDTPSLVYFCFTEYVAIDYPVVIMQNL 217

Query: 860  VTVEVDTKINSVDEHEHLNTXXXXXXXXXXXXXAIPSPDVVFGKC-LRNILKELTNAKSL 1036
                +   +   D+ E                      DVV     +  ++K + N + +
Sbjct: 218  FEARISLLVTQ-DQIERARAPNIDWV----------EDDVVLRLVNMEKLIKGIRNVQYM 266

Query: 1037 ILSAHGFQTFSEVPDEINSLPSSFHNLKFLKLTDLDNSGNICALAKLLKSFPCLETLVLE 1216
             LS +  +  S       S+P  F+NLK L L    + G   A+  LL++ P LETLVLE
Sbjct: 267  YLSPNTLEVLSLC---CESMP-VFNNLKSLTLKSHKSRG-WQAMPVLLRNCPHLETLVLE 321


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 98/349 (28%), Positives = 155/349 (44%), Gaps = 31/349 (8%)
 Frame = +2

Query: 179  SDEDIISSLPEQILHHILSYLDMKEVLLTSLLSTKWRNVWRSVPNLIFSESFWKDPVRKV 358
            ++ED IS+LP  +LH ILS++D  +V+ T +LS +W NVW+S P L F+   +   +   
Sbjct: 13   NNEDRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSD 72

Query: 359  LV---LSKFIYFVDTVLLLRGGSNINKLSITSSKYNNLNQIQRLITYAVMRNAKEIHM-- 523
                 +  F  F++ VL+ R      K+S+    +   + ++ LI YAV  +A+EI +  
Sbjct: 73   YYEDEMVNFTDFINQVLVRRNNFKAIKISLDLCGHTRYSLVESLIYYAVKHHAEEICIDT 132

Query: 524  -----------------------VGLDIYRAKPDLLSLLARVNTLHLVSVRISSFDTQEW 634
                                   + +D   A P  L  L  + TLHL   +  +FD +  
Sbjct: 133  ACRDVPIVLPRCFFNCESLRSLKLRIDGGIALPKSLG-LPSLKTLHLGGAQ--NFDGK-- 187

Query: 635  LHLKSQSLENLIIED--CRGFRCLGIYTPQLKYLKVENSREEYNPSGL-IEIDAPKLTSL 805
            +     +LENL IED          I+   LK L++ N R      G  + + APKLTS 
Sbjct: 188  IFSSCPNLENLTIEDICLNTIENFNIHALNLKSLEILNWRYSRIMRGCKVMLFAPKLTSF 247

Query: 806  VWKGYMYKDYIFSSPSSLVTVEVDTKINSVDEHEHLNTXXXXXXXXXXXXXAIPSPDVVF 985
             + G      +F S  +L +++    +N V +  +                        F
Sbjct: 248  KFDG---NTPLFWSEVNLTSLD---DVNVVLQRYYYRHDYQFYVDEDEYISGEDETKQGF 301

Query: 986  GKCLRNILKELTNAKSLILSAHGFQTFSEVPDEINSLPSSFHNLKFLKL 1132
               L  +L +  +AKSL LS +  +  S+VP  +N  PS F NLK+LKL
Sbjct: 302  CLDLLKMLHQFCSAKSLTLSMNIIEVLSKVPAALNKHPSPFSNLKYLKL 350


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
            gi|222873902|gb|EEF11033.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 99/348 (28%), Positives = 156/348 (44%), Gaps = 30/348 (8%)
 Frame = +2

Query: 179  SDEDIISSLPEQILHHILSYLDMKEVLLTSLLSTKWRNVWRSVPNLIFSESFWKDPVRKV 358
            ++ED IS+LP  +LHHILS++D  +V+ T +LS +W NVW+S P L F+   +   +   
Sbjct: 32   NNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSD 91

Query: 359  LV---LSKFIYFVDTVLLLRGGSNINKLSITSSKYNNLNQIQRLITYAVMRNAKEIHM-- 523
                 ++ F  F+  VL+ R      K+S+   +    + ++ LI YAV  + +EI +  
Sbjct: 92   YYDDEVNNFTDFIYHVLVRRHNLKAVKISLDILRDTRCSLVESLIYYAVKHHVEEISVNT 151

Query: 524  ----VGLDIYRAKPDLLSL------------------LARVNTLHLVSVRISSFDTQEWL 637
                + + + R   D  SL                  L  + TLHL   R  +FD +  +
Sbjct: 152  AHWDMPIVLPRCFFDCESLRSLKLKVDGGIALPKSLGLQSLKTLHLGGAR--NFDGK--I 207

Query: 638  HLKSQSLENLIIED--CRGFRCLGIYTPQLKYLKVENSREEYNPSGL-IEIDAPKLTSLV 808
                 +LENL IED          I+   LK L++ N R      G  + + APKLTS  
Sbjct: 208  FSTCPNLENLKIEDIYLNTIENFNIHALNLKSLEILNWRYGRIMRGCKVMLFAPKLTSFK 267

Query: 809  WKGYMYKDYIFSSPSSLVTVEVDTKINSVDEHEHLNTXXXXXXXXXXXXXAIPSPDVVFG 988
            + G      +F S  +L +++    +    +H H                     +   G
Sbjct: 268  FYG---NTPLFWSEVNLTSLDDVNVVLQRYQHSH---NYPFYVVEDEYISEEDETEQGLG 321

Query: 989  KCLRNILKELTNAKSLILSAHGFQTFSEVPDEINSLPSSFHNLKFLKL 1132
              L  +L +  +AKSL LS +  +  SEVP  ++  PS F NLK+LKL
Sbjct: 322  LNLIKMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKL 369


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 103/378 (27%), Positives = 163/378 (43%), Gaps = 35/378 (9%)
 Frame = +2

Query: 188  DIISSLPEQILHHILSYLDMKEVLLTSLLSTKWRNVWRSVPNLIFSESFWKDPVRKVLVL 367
            DIIS+LP+++L HILS+L  K  + TS+LS +WR +W SVP L F +  W +P   V + 
Sbjct: 10   DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELE 69

Query: 368  SKFIY---FVDTVLLLRGGSNINKLSITSSKYNNLNQIQRLITYAVMRNAKEIHMVGLDI 538
             + I    FVD VL     S I K  +   + NNL+ +   I  A+ R  +E+ +  L  
Sbjct: 70   ERIIMFQNFVDGVLRHSEVSCIKKFRL-GYRDNNLDSVYSWICIALERRVQELDLHLLID 128

Query: 539  YRAK-PDLLSL----------------------LARVNTLHLVSVRISSFDTQEWLHLKS 649
            +R + P +  +                      L  +  LHL SV  S  D+ + L    
Sbjct: 129  WRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGC 188

Query: 650  QSLENLII--EDCRGFRCLGIYTPQLKYLKV-------ENSREEYNPSGLIEIDAPKLTS 802
              LE L+I  E+      + +  P LK L++        +  E+ +    + +DAP L  
Sbjct: 189  PVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEY 248

Query: 803  LVWKGYMYKDYIFSSPSSLVTVEVDTKINSVDEHEHLNTXXXXXXXXXXXXXAIPSPDVV 982
            L    Y+ KDY      SLV   +D + +S +  E  +                 +  + 
Sbjct: 249  LSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPH-----------------NGGIS 291

Query: 983  FGKCLRNILKELTNAKSLILSAHGFQTFSEVPDEINSLPSSFHNLKFLKLTDLDNSGNIC 1162
            +   +  +L  ++N K L L+     + S    +   LP +FHN+  L+   +    N  
Sbjct: 292  YHGPIYELLGRISNVKCLSLTGVTLDSLSGTIGDY-KLP-TFHNMTRLEFLFI-GGFNWD 348

Query: 1163 ALAKLLKSFPCLETLVLE 1216
             L   L S P LE LV+E
Sbjct: 349  FLPNFLHSSPNLEALVIE 366