BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018175
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum]          60   3e-14
dbj|BAK02259.1| predicted protein [Hordeum vulgare subsp. vulgare]     63   7e-14
ref|XP_003558774.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    63   1e-13
gb|ADJ68231.1| DEAD box RNA helicase [Populus alba x Populus tre...    60   3e-13
ref|XP_002326399.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-13

>gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum]
          Length = 501

 Score = 60.5 bits (145), Expect(2) = 3e-14
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = -2

Query: 511 VINYDIPAKHNFRTEPNYEVYLHRCGRAGRFGQRGCI 401
           VINYD+P KH+ R EP+ EVYLHR GRAGRFG++G +
Sbjct: 419 VINYDLPVKHDNRVEPDCEVYLHRIGRAGRFGRKGAV 455



 Score = 42.7 bits (99), Expect(2) = 3e-14
 Identities = 20/36 (55%), Positives = 24/36 (66%)
 Frame = -3

Query: 414 KGAVFNFLCTYADFKLIDKIQEYFGS*IVEVSDWRS 307
           KGAVFN LC   D  +I KI+ +F S I EV DWR+
Sbjct: 452 KGAVFNLLCGDMDQMIISKIENHFDSKIAEVPDWRN 487


>dbj|BAK02259.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 506

 Score = 62.8 bits (151), Expect(2) = 7e-14
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = -2

Query: 511 VINYDIPAKHNFRTEPNYEVYLHRCGRAGRFGQRGCI 401
           VINYD+P K+N R EP+YEVYLHR GRAGRFG++G +
Sbjct: 423 VINYDMPIKYNTRDEPDYEVYLHRIGRAGRFGRKGAV 459



 Score = 38.9 bits (89), Expect(2) = 7e-14
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = -3

Query: 414 KGAVFNFLCTYADFKLIDKIQEYFGS*IVEVSDWRS 307
           KGAVFN LC   D  ++ KI++YF   + EV +W+S
Sbjct: 456 KGAVFNLLCGQTDEVVMTKIEDYFQHKVPEVPNWKS 491


>ref|XP_003558774.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like
           [Brachypodium distachyon]
          Length = 508

 Score = 62.8 bits (151), Expect(2) = 1e-13
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = -2

Query: 511 VINYDIPAKHNFRTEPNYEVYLHRCGRAGRFGQRGCI 401
           VINYD+P K+N R EP+YEVYLHR GRAGRFG++G +
Sbjct: 425 VINYDMPIKYNTRDEPDYEVYLHRIGRAGRFGRKGAV 461



 Score = 38.1 bits (87), Expect(2) = 1e-13
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -3

Query: 414 KGAVFNFLCTYADFKLIDKIQEYFGS*IVEVSDWRS 307
           KGAVFN LC   D  ++ KI+ YF   + EV +W+S
Sbjct: 458 KGAVFNLLCGDTDDNVMTKIENYFQHKVPEVPNWKS 493


>gb|ADJ68231.1| DEAD box RNA helicase [Populus alba x Populus tremula var.
           glandulosa]
          Length = 492

 Score = 60.1 bits (144), Expect(2) = 3e-13
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = -2

Query: 511 VINYDIPAKHNFRTEPNYEVYLHRCGRAGRFGQRGCI 401
           VINYD+P K+  ++EP+YEVYLHR GRAGRFG++G +
Sbjct: 410 VINYDLPVKYENQSEPHYEVYLHRIGRAGRFGRKGAV 446



 Score = 39.7 bits (91), Expect(2) = 3e-13
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -3

Query: 414 KGAVFNFLCTYADFKLIDKIQEYFGS*IVEVSDWRS 307
           KGAVFNF+ T  D  ++ KI+ YF S + E+  W S
Sbjct: 443 KGAVFNFIMTDHDLMIMRKIESYFNSPVAEIPSWGS 478


>ref|XP_002326399.1| predicted protein [Populus trichocarpa] gi|222833592|gb|EEE72069.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score = 60.1 bits (144), Expect(2) = 3e-13
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = -2

Query: 511 VINYDIPAKHNFRTEPNYEVYLHRCGRAGRFGQRGCI 401
           VINYD+P K+  ++EP+YEVYLHR GRAGRFG++G +
Sbjct: 410 VINYDLPVKYENQSEPHYEVYLHRIGRAGRFGRKGAV 446



 Score = 39.7 bits (91), Expect(2) = 3e-13
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -3

Query: 414 KGAVFNFLCTYADFKLIDKIQEYFGS*IVEVSDWRS 307
           KGAVFNF+ T  D  ++ KI+ YF S + E+  W S
Sbjct: 443 KGAVFNFIMTDHDLMIMRKIESYFNSPVAEIPSWGS 478