BLASTX nr result

ID: Coptis24_contig00018171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018171
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530230.1| PREDICTED: uncharacterized protein LOC100778...   116   5e-24
ref|XP_003604836.1| hypothetical protein MTR_4g019310 [Medicago ...   107   2e-21
gb|AFK41672.1| unknown [Medicago truncatula]                          106   6e-21
ref|XP_002299837.1| predicted protein [Populus trichocarpa] gi|2...   105   7e-21
ref|NP_187523.2| uncharacterized protein [Arabidopsis thaliana] ...   103   5e-20

>ref|XP_003530230.1| PREDICTED: uncharacterized protein LOC100778734 [Glycine max]
          Length = 379

 Score =  116 bits (290), Expect = 5e-24
 Identities = 73/181 (40%), Positives = 99/181 (54%), Gaps = 17/181 (9%)
 Frame = -3

Query: 721 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIRNQAP--PSVLGCLNNLYKS 548
           L+++V+K+ ++VVFAE+ KDFVD+L SFLT PLGTI RL++  +   P  +GCL++LY+S
Sbjct: 39  LKLVVNKETNKVVFAEAGKDFVDVLLSFLTFPLGTIARLVQKDSDVGPVQVGCLSSLYES 98

Query: 547 LEXXXXXXXXXXXXXXXNLYKSLENLEVGLLQSEKHKAMLLRPSNSSEHLCRKLKFNIDD 368
           +                       NLE   L +E  K MLL+P NSSE  CR LK NIDD
Sbjct: 99  VA----------------------NLEKECLWTEACKEMLLQPRNSSEDYCRSLKLNIDD 136

Query: 367 TEPTKY-------RCHHDSQDLY--------LIHENVIIEDDKSGGVFVNGKARFMISDD 233
           TEPTK+        C +     Y             ++  DDK    FVNG A F+++DD
Sbjct: 137 TEPTKHFMCTSNLDCAYSQLSTYPNGRCACGFAMTTLVFVDDKVYKGFVNGGATFIVTDD 196

Query: 232 L 230
           L
Sbjct: 197 L 197


>ref|XP_003604836.1| hypothetical protein MTR_4g019310 [Medicago truncatula]
           gi|355505891|gb|AES87033.1| hypothetical protein
           MTR_4g019310 [Medicago truncatula]
          Length = 474

 Score =  107 bits (268), Expect = 2e-21
 Identities = 62/134 (46%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
 Frame = -3

Query: 721 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIR----------NQAPPSVLG 572
           LR+LVDK+++RVV AES  D +DILFSFLTLPLGTI+RL+           N  P  +LG
Sbjct: 11  LRLLVDKEKNRVVVAESKSDLIDILFSFLTLPLGTIIRLVSKNQHDHIHEINDQPEEILG 70

Query: 571 CLNNLYKSLEXXXXXXXXXXXXXXXNLYKSLENLEVGLLQSEKHKAMLLRPSNSSEHLCR 392
           C+NN                      LYKS+ENL  G+  +   K MLL P N  E LC+
Sbjct: 71  CINN----------------------LYKSVENLNDGVFWNSICKTMLLCPRNPCEILCK 108

Query: 391 KLKFNIDDTEPTKY 350
           KLK N+DD+E  KY
Sbjct: 109 KLKLNLDDSETIKY 122


>gb|AFK41672.1| unknown [Medicago truncatula]
          Length = 500

 Score =  106 bits (264), Expect = 6e-21
 Identities = 61/134 (45%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
 Frame = -3

Query: 721 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIR----------NQAPPSVLG 572
           LR+LVDK+++RVV AES  D +DILFSFLTLPLGTI+RL+           N  P  +LG
Sbjct: 11  LRLLVDKEKNRVVVAESKSDLIDILFSFLTLPLGTIIRLVSKNQHDHIHEINDQPEEILG 70

Query: 571 CLNNLYKSLEXXXXXXXXXXXXXXXNLYKSLENLEVGLLQSEKHKAMLLRPSNSSEHLCR 392
           C+NN                      LYKS+ENL  G+  +   K +LL P N  E LC+
Sbjct: 71  CINN----------------------LYKSVENLNDGVFWNSICKTVLLCPRNPCEILCK 108

Query: 391 KLKFNIDDTEPTKY 350
           KLK N+DD+E  KY
Sbjct: 109 KLKLNLDDSETIKY 122


>ref|XP_002299837.1| predicted protein [Populus trichocarpa] gi|222847095|gb|EEE84642.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  105 bits (263), Expect = 7e-21
 Identities = 66/189 (34%), Positives = 94/189 (49%), Gaps = 27/189 (14%)
 Frame = -3

Query: 721 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIRNQAPPSVLGCLNNLYKSLE 542
           L+  VDKK +RVVF ESD+ FVDILFSFLT+P+GTI+ LI N +P +   C+NN      
Sbjct: 6   LKASVDKKSNRVVFVESDEFFVDILFSFLTMPMGTIIHLISNLSPTNGFVCMNN------ 59

Query: 541 XXXXXXXXXXXXXXXNLYKSLENLEVGLLQSEKHKAMLLRPSNSSEHLCRKLKFNIDDTE 362
                           LYKS+EN++    ++E  K MLL P N++   C+ LK  IDD +
Sbjct: 60  ----------------LYKSVENIDAMYFRTEACKQMLLHPHNAAAAYCKSLKLKIDDID 103

Query: 361 PTKY------RCHHDSQDLYLIHENVII---------------------EDDKSGGVFVN 263
            + +       C H    L+  ++N+                        D ++ GVFV 
Sbjct: 104 TSSFFCCESSDCTHSGYKLWSHYKNLYCGCGRPMSRNLNLSCRAPSNSGSDARNRGVFVE 163

Query: 262 GKARFMISD 236
           G  RF++SD
Sbjct: 164 GLTRFVVSD 172


>ref|NP_187523.2| uncharacterized protein [Arabidopsis thaliana]
           gi|55740621|gb|AAV63903.1| hypothetical protein
           [Arabidopsis thaliana] gi|332641203|gb|AEE74724.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 343

 Score =  103 bits (256), Expect = 5e-20
 Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 24/189 (12%)
 Frame = -3

Query: 721 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIRNQAPP--SVLGCLNNLYKS 548
           LR+L+D++++RV+ AE+ KDFVD+L S LTLP+GTIVRL+     P  SV+GCL+     
Sbjct: 12  LRLLIDEEKNRVILAEAGKDFVDVLCSLLTLPMGTIVRLLEKHQNPQSSVVGCLH----- 66

Query: 547 LEXXXXXXXXXXXXXXXNLYKSLENLEVGLLQSEKHKAMLLRPSNSSEHLCRKLKFNIDD 368
                            NLYKS+ +++V   +S+  K  LL P ++     R LK NIDD
Sbjct: 67  -----------------NLYKSVADMDVDNFESQACKHFLLHPRSAKGSHGRDLKLNIDD 109

Query: 367 TEPTKY----------------------RCHHDSQDLYLIHENVIIEDDKSGGVFVNGKA 254
           TE TK+                      +C   S     +H  + +E+ ++ GVF + + 
Sbjct: 110 TEATKFFVCPNFVSTEACRKLFSNVSTMKCRCGSS----MHREIPVEEQQADGVFPSCRT 165

Query: 253 RFMISDDLK 227
            F+I+DDLK
Sbjct: 166 SFVITDDLK 174


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