BLASTX nr result
ID: Coptis24_contig00018171
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018171 (723 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003530230.1| PREDICTED: uncharacterized protein LOC100778... 116 5e-24 ref|XP_003604836.1| hypothetical protein MTR_4g019310 [Medicago ... 107 2e-21 gb|AFK41672.1| unknown [Medicago truncatula] 106 6e-21 ref|XP_002299837.1| predicted protein [Populus trichocarpa] gi|2... 105 7e-21 ref|NP_187523.2| uncharacterized protein [Arabidopsis thaliana] ... 103 5e-20 >ref|XP_003530230.1| PREDICTED: uncharacterized protein LOC100778734 [Glycine max] Length = 379 Score = 116 bits (290), Expect = 5e-24 Identities = 73/181 (40%), Positives = 99/181 (54%), Gaps = 17/181 (9%) Frame = -3 Query: 721 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIRNQAP--PSVLGCLNNLYKS 548 L+++V+K+ ++VVFAE+ KDFVD+L SFLT PLGTI RL++ + P +GCL++LY+S Sbjct: 39 LKLVVNKETNKVVFAEAGKDFVDVLLSFLTFPLGTIARLVQKDSDVGPVQVGCLSSLYES 98 Query: 547 LEXXXXXXXXXXXXXXXNLYKSLENLEVGLLQSEKHKAMLLRPSNSSEHLCRKLKFNIDD 368 + NLE L +E K MLL+P NSSE CR LK NIDD Sbjct: 99 VA----------------------NLEKECLWTEACKEMLLQPRNSSEDYCRSLKLNIDD 136 Query: 367 TEPTKY-------RCHHDSQDLY--------LIHENVIIEDDKSGGVFVNGKARFMISDD 233 TEPTK+ C + Y ++ DDK FVNG A F+++DD Sbjct: 137 TEPTKHFMCTSNLDCAYSQLSTYPNGRCACGFAMTTLVFVDDKVYKGFVNGGATFIVTDD 196 Query: 232 L 230 L Sbjct: 197 L 197 >ref|XP_003604836.1| hypothetical protein MTR_4g019310 [Medicago truncatula] gi|355505891|gb|AES87033.1| hypothetical protein MTR_4g019310 [Medicago truncatula] Length = 474 Score = 107 bits (268), Expect = 2e-21 Identities = 62/134 (46%), Positives = 77/134 (57%), Gaps = 10/134 (7%) Frame = -3 Query: 721 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIR----------NQAPPSVLG 572 LR+LVDK+++RVV AES D +DILFSFLTLPLGTI+RL+ N P +LG Sbjct: 11 LRLLVDKEKNRVVVAESKSDLIDILFSFLTLPLGTIIRLVSKNQHDHIHEINDQPEEILG 70 Query: 571 CLNNLYKSLEXXXXXXXXXXXXXXXNLYKSLENLEVGLLQSEKHKAMLLRPSNSSEHLCR 392 C+NN LYKS+ENL G+ + K MLL P N E LC+ Sbjct: 71 CINN----------------------LYKSVENLNDGVFWNSICKTMLLCPRNPCEILCK 108 Query: 391 KLKFNIDDTEPTKY 350 KLK N+DD+E KY Sbjct: 109 KLKLNLDDSETIKY 122 >gb|AFK41672.1| unknown [Medicago truncatula] Length = 500 Score = 106 bits (264), Expect = 6e-21 Identities = 61/134 (45%), Positives = 77/134 (57%), Gaps = 10/134 (7%) Frame = -3 Query: 721 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIR----------NQAPPSVLG 572 LR+LVDK+++RVV AES D +DILFSFLTLPLGTI+RL+ N P +LG Sbjct: 11 LRLLVDKEKNRVVVAESKSDLIDILFSFLTLPLGTIIRLVSKNQHDHIHEINDQPEEILG 70 Query: 571 CLNNLYKSLEXXXXXXXXXXXXXXXNLYKSLENLEVGLLQSEKHKAMLLRPSNSSEHLCR 392 C+NN LYKS+ENL G+ + K +LL P N E LC+ Sbjct: 71 CINN----------------------LYKSVENLNDGVFWNSICKTVLLCPRNPCEILCK 108 Query: 391 KLKFNIDDTEPTKY 350 KLK N+DD+E KY Sbjct: 109 KLKLNLDDSETIKY 122 >ref|XP_002299837.1| predicted protein [Populus trichocarpa] gi|222847095|gb|EEE84642.1| predicted protein [Populus trichocarpa] Length = 492 Score = 105 bits (263), Expect = 7e-21 Identities = 66/189 (34%), Positives = 94/189 (49%), Gaps = 27/189 (14%) Frame = -3 Query: 721 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIRNQAPPSVLGCLNNLYKSLE 542 L+ VDKK +RVVF ESD+ FVDILFSFLT+P+GTI+ LI N +P + C+NN Sbjct: 6 LKASVDKKSNRVVFVESDEFFVDILFSFLTMPMGTIIHLISNLSPTNGFVCMNN------ 59 Query: 541 XXXXXXXXXXXXXXXNLYKSLENLEVGLLQSEKHKAMLLRPSNSSEHLCRKLKFNIDDTE 362 LYKS+EN++ ++E K MLL P N++ C+ LK IDD + Sbjct: 60 ----------------LYKSVENIDAMYFRTEACKQMLLHPHNAAAAYCKSLKLKIDDID 103 Query: 361 PTKY------RCHHDSQDLYLIHENVII---------------------EDDKSGGVFVN 263 + + C H L+ ++N+ D ++ GVFV Sbjct: 104 TSSFFCCESSDCTHSGYKLWSHYKNLYCGCGRPMSRNLNLSCRAPSNSGSDARNRGVFVE 163 Query: 262 GKARFMISD 236 G RF++SD Sbjct: 164 GLTRFVVSD 172 >ref|NP_187523.2| uncharacterized protein [Arabidopsis thaliana] gi|55740621|gb|AAV63903.1| hypothetical protein [Arabidopsis thaliana] gi|332641203|gb|AEE74724.1| uncharacterized protein [Arabidopsis thaliana] Length = 343 Score = 103 bits (256), Expect = 5e-20 Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 24/189 (12%) Frame = -3 Query: 721 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIRNQAPP--SVLGCLNNLYKS 548 LR+L+D++++RV+ AE+ KDFVD+L S LTLP+GTIVRL+ P SV+GCL+ Sbjct: 12 LRLLIDEEKNRVILAEAGKDFVDVLCSLLTLPMGTIVRLLEKHQNPQSSVVGCLH----- 66 Query: 547 LEXXXXXXXXXXXXXXXNLYKSLENLEVGLLQSEKHKAMLLRPSNSSEHLCRKLKFNIDD 368 NLYKS+ +++V +S+ K LL P ++ R LK NIDD Sbjct: 67 -----------------NLYKSVADMDVDNFESQACKHFLLHPRSAKGSHGRDLKLNIDD 109 Query: 367 TEPTKY----------------------RCHHDSQDLYLIHENVIIEDDKSGGVFVNGKA 254 TE TK+ +C S +H + +E+ ++ GVF + + Sbjct: 110 TEATKFFVCPNFVSTEACRKLFSNVSTMKCRCGSS----MHREIPVEEQQADGVFPSCRT 165 Query: 253 RFMISDDLK 227 F+I+DDLK Sbjct: 166 SFVITDDLK 174