BLASTX nr result

ID: Coptis24_contig00018169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018169
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD42981.1| unknown protein [Arabidopsis thaliana]                175   3e-42
ref|NP_196845.1| putative FKBP-type peptidyl-prolyl cis-trans is...   175   3e-42
ref|XP_002873610.1| immunophilin [Arabidopsis lyrata subsp. lyra...   174   5e-42
ref|XP_004152320.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   171   4e-41
ref|XP_002267989.1| PREDICTED: probable FKBP-type peptidyl-proly...   170   1e-40

>dbj|BAD42981.1| unknown protein [Arabidopsis thaliana]
          Length = 255

 Score =  175 bits (444), Expect = 3e-42
 Identities = 83/93 (89%), Positives = 88/93 (94%)
 Frame = -3

Query: 417 SFEGDDKEFFKFTLGSQQVIPAFEEATVGMTLGGIRRVIVPPELGYPDNDYNKSGPRPTT 238
           SFEGDDKEFFKFTLGS +VIPAFEEA  GM LGGIRR+IVPPELGYPDNDYNKSGPRP T
Sbjct: 163 SFEGDDKEFFKFTLGSNEVIPAFEEAVSGMALGGIRRIIVPPELGYPDNDYNKSGPRPMT 222

Query: 237 FSGQRALDFVLKNQGLIDKTLLFDIELLKIMPN 139
           FSGQRALDFVL+NQGLIDKTLLFD+ELLKI+PN
Sbjct: 223 FSGQRALDFVLRNQGLIDKTLLFDVELLKIVPN 255


>ref|NP_196845.1| putative FKBP-type peptidyl-prolyl cis-trans isomerase 7
           [Arabidopsis thaliana]
           gi|75335665|sp|Q9LYR5.1|FKB19_ARATH RecName:
           Full=Peptidyl-prolyl cis-trans isomerase FKBP19,
           chloroplastic; Short=PPIase FKBP19; AltName:
           Full=FK506-binding protein 19; Short=AtFKBP19; AltName:
           Full=Immunophilin FKBP19; AltName: Full=Rotamase; Flags:
           Precursor gi|7543908|emb|CAB87148.1| putative protein
           [Arabidopsis thaliana] gi|46931302|gb|AAT06455.1|
           At5g13410 [Arabidopsis thaliana]
           gi|222423171|dbj|BAH19563.1| AT5G13410 [Arabidopsis
           thaliana] gi|332004508|gb|AED91891.1| putative FKBP-type
           peptidyl-prolyl cis-trans isomerase 7 [Arabidopsis
           thaliana]
          Length = 256

 Score =  175 bits (444), Expect = 3e-42
 Identities = 83/93 (89%), Positives = 88/93 (94%)
 Frame = -3

Query: 417 SFEGDDKEFFKFTLGSQQVIPAFEEATVGMTLGGIRRVIVPPELGYPDNDYNKSGPRPTT 238
           SFEGDDKEFFKFTLGS +VIPAFEEA  GM LGGIRR+IVPPELGYPDNDYNKSGPRP T
Sbjct: 164 SFEGDDKEFFKFTLGSNEVIPAFEEAVSGMALGGIRRIIVPPELGYPDNDYNKSGPRPMT 223

Query: 237 FSGQRALDFVLKNQGLIDKTLLFDIELLKIMPN 139
           FSGQRALDFVL+NQGLIDKTLLFD+ELLKI+PN
Sbjct: 224 FSGQRALDFVLRNQGLIDKTLLFDVELLKIVPN 256


>ref|XP_002873610.1| immunophilin [Arabidopsis lyrata subsp. lyrata]
           gi|297319447|gb|EFH49869.1| immunophilin [Arabidopsis
           lyrata subsp. lyrata]
          Length = 256

 Score =  174 bits (442), Expect = 5e-42
 Identities = 83/93 (89%), Positives = 88/93 (94%)
 Frame = -3

Query: 417 SFEGDDKEFFKFTLGSQQVIPAFEEATVGMTLGGIRRVIVPPELGYPDNDYNKSGPRPTT 238
           SFEGDDKEFFKFTLGS +VIPAFEEA  GM LGGIRR+IVPPELGYPDNDYNKSGPRP T
Sbjct: 164 SFEGDDKEFFKFTLGSNEVIPAFEEAVSGMALGGIRRLIVPPELGYPDNDYNKSGPRPMT 223

Query: 237 FSGQRALDFVLKNQGLIDKTLLFDIELLKIMPN 139
           FSGQRALDFVL+NQGLIDKTLLFD+ELLKI+PN
Sbjct: 224 FSGQRALDFVLRNQGLIDKTLLFDVELLKIVPN 256


>ref|XP_004152320.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP19,
           chloroplastic-like [Cucumis sativus]
           gi|449522654|ref|XP_004168341.1| PREDICTED:
           peptidyl-prolyl cis-trans isomerase FKBP19,
           chloroplastic-like [Cucumis sativus]
          Length = 257

 Score =  171 bits (434), Expect = 4e-41
 Identities = 82/93 (88%), Positives = 87/93 (93%)
 Frame = -3

Query: 417 SFEGDDKEFFKFTLGSQQVIPAFEEATVGMTLGGIRRVIVPPELGYPDNDYNKSGPRPTT 238
           SFEGDDK FFKF LGSQ+VI AFEEA VGMTLGG+RR+IVPPELGYPDNDYNK GPRPTT
Sbjct: 162 SFEGDDKAFFKFRLGSQEVIQAFEEAVVGMTLGGVRRIIVPPELGYPDNDYNKKGPRPTT 221

Query: 237 FSGQRALDFVLKNQGLIDKTLLFDIELLKIMPN 139
           FSGQRAL FVL+NQGLIDKTLLFDIELLKI+PN
Sbjct: 222 FSGQRALAFVLRNQGLIDKTLLFDIELLKIIPN 254


>ref|XP_002267989.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           7, chloroplastic isoform 1 [Vitis vinifera]
           gi|296085536|emb|CBI29268.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score =  170 bits (431), Expect = 1e-40
 Identities = 80/93 (86%), Positives = 89/93 (95%)
 Frame = -3

Query: 417 SFEGDDKEFFKFTLGSQQVIPAFEEATVGMTLGGIRRVIVPPELGYPDNDYNKSGPRPTT 238
           SF+GDDK+FFKF +GSQQVIPAFEEA  GM+LG IRR+IVPPELGYP+ND+NKSGPRPTT
Sbjct: 165 SFQGDDKDFFKFRVGSQQVIPAFEEAVSGMSLGSIRRIIVPPELGYPENDFNKSGPRPTT 224

Query: 237 FSGQRALDFVLKNQGLIDKTLLFDIELLKIMPN 139
           FSGQRALDFVL+NQGLIDKTLLFDIELLKI+PN
Sbjct: 225 FSGQRALDFVLRNQGLIDKTLLFDIELLKIIPN 257


Top