BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018168
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF93727.1| retrotransposon protein, putative, Ty3-gypsy subc...    70   1e-10
gb|ABA95817.1| retrotransposon protein, putative, Ty3-gypsy subc...    69   4e-10
emb|CAN73070.1| hypothetical protein VITISV_016195 [Vitis vinifera]    69   5e-10
emb|CAE04437.2| OSJNBa0018J19.4 [Oryza sativa Japonica Group]          68   7e-10
emb|CAN66056.1| hypothetical protein VITISV_020755 [Vitis vinifera]    68   7e-10

>gb|ABF93727.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1053

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/66 (50%), Positives = 44/66 (66%)
 Frame = +3

Query: 63  LEQAFSRLCRTQMKLNPEKCLFGASSGKFLGYQVSQ*GIKANPNQIRAFLKMLRKSVPKK 242
           LE+ F+ +C  +MKLNPEKC+FG  SGK LG+ +SQ GI+ANP +I A L M   S  K 
Sbjct: 525 LEETFASICAFRMKLNPEKCIFGVPSGKLLGFMISQRGIQANPEKINAILNMKPPSSQKD 584

Query: 243 LTQWRG 260
           + +  G
Sbjct: 585 VQKLTG 590


>gb|ABA95817.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1339

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/66 (50%), Positives = 43/66 (65%)
 Frame = +3

Query: 63   LEQAFSRLCRTQMKLNPEKCLFGASSGKFLGYQVSQ*GIKANPNQIRAFLKMLRKSVPKK 242
            LE+ F+ +C  +MKLNPEKC+FG  SGK LG+ VS  GI+ANP +I A L M   S  K 
Sbjct: 889  LEETFASICAFRMKLNPEKCIFGVPSGKLLGFMVSHRGIQANPEKINAILNMKPPSSQKD 948

Query: 243  LTQWRG 260
            + +  G
Sbjct: 949  VQKLTG 954


>emb|CAN73070.1| hypothetical protein VITISV_016195 [Vitis vinifera]
          Length = 1720

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = +3

Query: 54   LQCLEQAFSRLCRTQMKLNPEKCLFGASSGKFLGYQVSQ*GIKANPNQIRAFLKMLRKSV 233
            L  LE+ F R+ + +++LNP+KC F  +SGK LGY V++ GIKANPN+IRA L M     
Sbjct: 1074 LAALERFFERIRQFRLRLNPKKCTFRVTSGKLLGYMVNERGIKANPNKIRAILDM---PA 1130

Query: 234  PKKLTQWRGFRERM-FSWEFIYNLI 305
            P+   + RGF  R+ +   FI  LI
Sbjct: 1131 PRTEREVRGFLGRLQYISRFIARLI 1155


>emb|CAE04437.2| OSJNBa0018J19.4 [Oryza sativa Japonica Group]
          Length = 1527

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/66 (50%), Positives = 43/66 (65%)
 Frame = +3

Query: 63   LEQAFSRLCRTQMKLNPEKCLFGASSGKFLGYQVSQ*GIKANPNQIRAFLKMLRKSVPKK 242
            LE+ F+ +C  +MKLNPEKC+FG   GK LG+ VSQ GI+ANP +I A L M   S  K 
Sbjct: 1183 LEETFTSICAFKMKLNPEKCIFGVPLGKLLGFMVSQRGIQANPEKINAILNMKPPSSQKG 1242

Query: 243  LTQWRG 260
            + +  G
Sbjct: 1243 VQKLTG 1248


>emb|CAN66056.1| hypothetical protein VITISV_020755 [Vitis vinifera]
          Length = 1529

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/74 (48%), Positives = 48/74 (64%)
 Frame = +3

Query: 54   LQCLEQAFSRLCRTQMKLNPEKCLFGASSGKFLGYQVSQ*GIKANPNQIRAFLKMLRKSV 233
            L  LE+ F R+ +  ++LNPEKC FG +SGK LGY VS+ GIK +PN+IRA L M     
Sbjct: 1387 LAALERFFERIRQFILRLNPEKCTFGVTSGKLLGYMVSERGIKVDPNKIRAILDM---PA 1443

Query: 234  PKKLTQWRGFRERM 275
            P+   + RGF  R+
Sbjct: 1444 PRTERKVRGFLGRL 1457