BLASTX nr result

ID: Coptis24_contig00018133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018133
         (1308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547771.1| PREDICTED: E3 ubiquitin-protein ligase CHIP-...   422   e-115
ref|XP_003520993.1| PREDICTED: E3 ubiquitin-protein ligase CHIP-...   411   e-112
ref|XP_002303074.1| predicted protein [Populus trichocarpa] gi|2...   411   e-112
emb|CAN63106.1| hypothetical protein VITISV_000496 [Vitis vinifera]   410   e-112
gb|ACU22780.1| unknown [Glycine max]                                  408   e-111

>ref|XP_003547771.1| PREDICTED: E3 ubiquitin-protein ligase CHIP-like [Glycine max]
          Length = 278

 Score =  422 bits (1084), Expect = e-115
 Identities = 207/274 (75%), Positives = 232/274 (84%), Gaps = 1/274 (0%)
 Frame = -1

Query: 1077 SAVVKQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPSVAVYWTNRALCHMKRNDWSRV 898
            +A  KQAE  R DGN  FKKDRFGAAIDAYTEAITLCP+V VYWTNRALCH+KRNDW RV
Sbjct: 5    AAAAKQAEKLRIDGNTYFKKDRFGAAIDAYTEAITLCPNVPVYWTNRALCHLKRNDWERV 64

Query: 897  EEDSRRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIWQ 718
            EEDSR+A+QLD NSVKAHYM+GL+LL+R E A+G+K+LEKALDLGRGANPK YMVE+IWQ
Sbjct: 65   EEDSRKAIQLDSNSVKAHYMLGLALLQRQESAKGIKELEKALDLGRGANPKGYMVEEIWQ 124

Query: 717  ELAKAKYLEWEHASSQRSWKLQSLKEACEKALEVQYLLDTSQ-SGITDITTNSYIEQLTT 541
            ELAKAKYLEWE +SS+RSW+LQSLKEACE AL+ ++ LD SQ  G  D  T S+ EQL  
Sbjct: 125  ELAKAKYLEWERSSSKRSWELQSLKEACESALKEKHFLDYSQMEGFVDDATTSHSEQLEA 184

Query: 540  LEQVFGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGKFDPI 361
            LE+VF  A E DIPTEVPDYLCC ITLDIF DPVITPSG+TYERAV+L+HLQKVGKFDPI
Sbjct: 185  LERVFNTAAEADIPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQKVGKFDPI 244

Query: 360  TREPLYEHQLISNLAIKEAVHAFLKERGWAYKTD 259
            TREPL   QL+ NLAIKEAV AFL + GWAYK D
Sbjct: 245  TREPLDPSQLVPNLAIKEAVEAFLDKHGWAYKID 278


>ref|XP_003520993.1| PREDICTED: E3 ubiquitin-protein ligase CHIP-like [Glycine max]
          Length = 278

 Score =  411 bits (1057), Expect = e-112
 Identities = 202/274 (73%), Positives = 227/274 (82%), Gaps = 1/274 (0%)
 Frame = -1

Query: 1077 SAVVKQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPSVAVYWTNRALCHMKRNDWSRV 898
            +A  KQAE  R DGN  FKKDRFGAAIDAYTEAITLCP+V VYWTNRALCH+KRNDW RV
Sbjct: 5    AAAAKQAEKLRIDGNTYFKKDRFGAAIDAYTEAITLCPNVPVYWTNRALCHLKRNDWERV 64

Query: 897  EEDSRRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIWQ 718
            EEDSR+A+QLD NSVKAHY++GL+LL+R E  +G+K+LEKALDLGRGANPK YMVE+IWQ
Sbjct: 65   EEDSRKAIQLDSNSVKAHYILGLALLQRQESVKGIKELEKALDLGRGANPKGYMVEEIWQ 124

Query: 717  ELAKAKYLEWEHASSQRSWKLQSLKEACEKALEVQYLLDTSQ-SGITDITTNSYIEQLTT 541
            ELAKAKYLEWE  SS+RSW+LQ LKEACE AL+ ++ LD SQ  G  D  T S  EQL  
Sbjct: 125  ELAKAKYLEWERLSSKRSWELQCLKEACESALKEKHFLDFSQMEGFVDDATTSQSEQLEA 184

Query: 540  LEQVFGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGKFDPI 361
            LE+VF  A E D PTEVPDYLCC ITLDIF DPVITPSG+TYERAV+L+HLQKVGKFDPI
Sbjct: 185  LERVFNTAAEADTPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQKVGKFDPI 244

Query: 360  TREPLYEHQLISNLAIKEAVHAFLKERGWAYKTD 259
            TREPL   QL+ NLAIKEAV AFL + GWAYK +
Sbjct: 245  TREPLDPSQLVPNLAIKEAVEAFLDKHGWAYKIE 278


>ref|XP_002303074.1| predicted protein [Populus trichocarpa] gi|222844800|gb|EEE82347.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  411 bits (1056), Expect = e-112
 Identities = 199/278 (71%), Positives = 234/278 (84%), Gaps = 4/278 (1%)
 Frame = -1

Query: 1080 LSAVVKQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPSVAVYWTNRALCHMKRNDWSR 901
            LS   K+A+  RQ+GN CF KDRF AAIDAYT AITLCP V VYWTNRALCH KRNDW+R
Sbjct: 8    LSDEEKRADKLRQEGNICFSKDRFQAAIDAYTAAITLCPKVPVYWTNRALCHRKRNDWTR 67

Query: 900  VEEDSRRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIW 721
            VEEDSR+A+QLDH SVKAHYM+GL+LL++ EY+EGVK+LEKALDLGRGANP  YMVE+IW
Sbjct: 68   VEEDSRKAIQLDHYSVKAHYMLGLALLQKQEYSEGVKELEKALDLGRGANPNGYMVEEIW 127

Query: 720  QELAKAKYLEWEHASSQRSWKLQSLKEACEKALEVQYLLDTSQS-GITD---ITTNSYIE 553
            +ELAKAKYLEWE  S+QRSW+LQSLKEACE+AL+ ++ LD S++ G  D   ++  S+++
Sbjct: 128  EELAKAKYLEWEEESTQRSWELQSLKEACERALKEKHFLDDSETEGFLDDPIVSIVSHLQ 187

Query: 552  QLTTLEQVFGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGK 373
            QL  L QVF KA EDD P+EVPDYLCC ITLDI RDPVITPSGV+YERAVLLDHL+KVG 
Sbjct: 188  QLELLGQVFQKAAEDDTPSEVPDYLCCKITLDILRDPVITPSGVSYERAVLLDHLEKVGN 247

Query: 372  FDPITREPLYEHQLISNLAIKEAVHAFLKERGWAYKTD 259
            FDP+TREPL   QL+ NLAIKEAVHA+L + GWAYKT+
Sbjct: 248  FDPVTREPLEPSQLVPNLAIKEAVHAYLDKHGWAYKTE 285


>emb|CAN63106.1| hypothetical protein VITISV_000496 [Vitis vinifera]
          Length = 276

 Score =  410 bits (1054), Expect = e-112
 Identities = 200/270 (74%), Positives = 229/270 (84%), Gaps = 1/270 (0%)
 Frame = -1

Query: 1065 KQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPSVAVYWTNRALCHMKRNDWSRVEEDS 886
            KQAE  R DGN  FKK RF AAIDAYTEAITLCP+V +YWTNRAL H KRN+W+RVEED 
Sbjct: 7    KQAEQLRLDGNTYFKKGRFAAAIDAYTEAITLCPNVPIYWTNRALGHRKRNNWTRVEEDC 66

Query: 885  RRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIWQELAK 706
            RRA+QLD NSVKAHYM+GL+LL+R EYAEGVK+LEKALDLGRGANPK YMVE+IWQELAK
Sbjct: 67   RRAIQLDSNSVKAHYMLGLALLQREEYAEGVKELEKALDLGRGANPKGYMVEEIWQELAK 126

Query: 705  AKYLEWEHASSQRSWKLQSLKEACEKALEVQYLLDTSQ-SGITDITTNSYIEQLTTLEQV 529
            AKY+EWEH S++RSW+LQ+LKEACE AL+ ++L D+S+  G  D    S +EQL  L++V
Sbjct: 127  AKYMEWEHESTKRSWELQTLKEACETALKEKHLFDSSELEGFLDEIPRSNLEQLEALDRV 186

Query: 528  FGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGKFDPITREP 349
            F  A E D+PT+VPDYLCC ITLDIFRDPVI PSG+TYER VLLDHL+KVGKFDPITREP
Sbjct: 187  FRIAAEADLPTDVPDYLCCKITLDIFRDPVIAPSGLTYEREVLLDHLEKVGKFDPITREP 246

Query: 348  LYEHQLISNLAIKEAVHAFLKERGWAYKTD 259
            L + QL+SNLAIKEAV AFL E GWAYKTD
Sbjct: 247  LSQSQLVSNLAIKEAVQAFLDEHGWAYKTD 276


>gb|ACU22780.1| unknown [Glycine max]
          Length = 278

 Score =  408 bits (1049), Expect = e-111
 Identities = 201/274 (73%), Positives = 225/274 (82%), Gaps = 1/274 (0%)
 Frame = -1

Query: 1077 SAVVKQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPSVAVYWTNRALCHMKRNDWSRV 898
            +A  KQAE  R DGN  FKKDRFGAAIDAYTEAITLCP+V VYWTNRALCH+KRNDW RV
Sbjct: 5    AAAAKQAEKLRIDGNTYFKKDRFGAAIDAYTEAITLCPNVPVYWTNRALCHLKRNDWERV 64

Query: 897  EEDSRRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIWQ 718
            EEDSR+A+QLD NSVKAHY++GL+LL+R E  +G+K+LEKALDLGRGANPK YMVE+IWQ
Sbjct: 65   EEDSRKAIQLDSNSVKAHYILGLALLQRQESVKGIKELEKALDLGRGANPKGYMVEEIWQ 124

Query: 717  ELAKAKYLEWEHASSQRSWKLQSLKEACEKALEVQYLLDTSQ-SGITDITTNSYIEQLTT 541
            ELAKAKYLEWE  SS+RSW+LQ LKEACE AL+ +Y LD SQ  G  D  T S  EQL  
Sbjct: 125  ELAKAKYLEWERLSSKRSWELQCLKEACESALKEKYFLDFSQMEGFVDDATTSQSEQLEA 184

Query: 540  LEQVFGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGKFDPI 361
            LE+VF  A E D PTEVPDYLCC ITLDIF DPVITPSG+TYERAV+L+HLQK GKFDPI
Sbjct: 185  LERVFNTAAEADTPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQKGGKFDPI 244

Query: 360  TREPLYEHQLISNLAIKEAVHAFLKERGWAYKTD 259
            TREPL   Q + NLAIKEAV AFL + GWAYK +
Sbjct: 245  TREPLDPSQSVPNLAIKEAVEAFLDKHGWAYKIE 278


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