BLASTX nr result

ID: Coptis24_contig00018126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018126
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63030.1| actin [Isatis tinctoria]                               255   5e-66
gb|AFL70161.1| actin [Agastache rugosa]                               254   7e-66
gb|EFN53173.1| hypothetical protein CHLNCDRAFT_136976 [Chlorella...   254   7e-66
gb|AAV83799.1| putative actin 1 [Chorispora bungeana]                 254   7e-66
gb|AAD41039.1|AF112538_1 actin [Malva pusilla]                        254   1e-65

>gb|AAW63030.1| actin [Isatis tinctoria]
          Length = 377

 Score =  255 bits (651), Expect = 5e-66
 Identities = 131/208 (62%), Positives = 161/208 (77%), Gaps = 5/208 (2%)
 Frame = +2

Query: 2   AGFAGDENPRVVFPSMVGRSR----TQHFWQKHAYVGDEAKSKIGDLNSAYPIDHGVVRD 169
           AGFAGD+ PR VFPS+VGR R    T    QK AYVGDEA+SK G L   YPI+HG+V +
Sbjct: 21  AGFAGDDAPRAVFPSIVGRPRHTGVTVWMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN 80

Query: 170 WDNMVEIWDNIF-KELQVDPEEHPILLTEPALNPKENREDMTEVMFEIFDVPSLCIAIQA 346
           WD+M +IW + F  EL+V PEEHP+LLTE  LNPK NRE MT++MFE F+VP++ +AIQA
Sbjct: 81  WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQA 140

Query: 347 VLTMYNYGRTTGVVVELGDGVSEVVPIYEGYLLSDAMNRFNLAGQDLTDFLMNMLTESGK 526
           VL++Y  GRTTG+V++ GDGVS  VPIYEGY L  A+ R +LAG+DLTD LM +LTE G 
Sbjct: 141 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGY 200

Query: 527 MFSTDAGQEIVCNIKEKLAYVAIDYEQE 610
           MF+T A +EIV +IKEKLAYVA+DYEQE
Sbjct: 201 MFTTTAEREIVRDIKEKLAYVALDYEQE 228


>gb|AFL70161.1| actin [Agastache rugosa]
          Length = 377

 Score =  254 bits (650), Expect = 7e-66
 Identities = 128/208 (61%), Positives = 162/208 (77%), Gaps = 5/208 (2%)
 Frame = +2

Query: 2   AGFAGDENPRVVFPSMVGRSRTQHFW----QKHAYVGDEAKSKIGDLNSAYPIDHGVVRD 169
           AGFAGD+ PR VFPS+VGR R         QK AYVGDEA+SK G L   YPI+HG+V +
Sbjct: 21  AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN 80

Query: 170 WDNMVEIWDNIF-KELQVDPEEHPILLTEPALNPKENREDMTEVMFEIFDVPSLCIAIQA 346
           WD+M +IW + F  EL+V PEEHP+LLTE  LNPK NRE MT++MFE F+VP++ +AIQA
Sbjct: 81  WDDMEKIWHHTFYNELRVGPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQA 140

Query: 347 VLTMYNYGRTTGVVVELGDGVSEVVPIYEGYLLSDAMNRFNLAGQDLTDFLMNMLTESGK 526
           VL++Y  GRTTG+V++ GDGVS  VPIYEGY L  A++R +LAG+DLTD+LM +LTE G 
Sbjct: 141 VLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAISRLDLAGRDLTDYLMKILTERGY 200

Query: 527 MFSTDAGQEIVCNIKEKLAYVAIDYEQE 610
           MF+T A +EIV ++KEKLAYVA+D+EQE
Sbjct: 201 MFTTTAEREIVRDVKEKLAYVALDFEQE 228


>gb|EFN53173.1| hypothetical protein CHLNCDRAFT_136976 [Chlorella variabilis]
          Length = 385

 Score =  254 bits (650), Expect = 7e-66
 Identities = 129/208 (62%), Positives = 160/208 (76%), Gaps = 5/208 (2%)
 Frame = +2

Query: 2   AGFAGDENPRVVFPSMVGRSRTQHFW----QKHAYVGDEAKSKIGDLNSAYPIDHGVVRD 169
           AGFAGD+ PR VFPS+VGR R Q       QK AYVGDEA+SK G L   YPI+HG+V +
Sbjct: 21  AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTN 80

Query: 170 WDNMVEIWDNIF-KELQVDPEEHPILLTEPALNPKENREDMTEVMFEIFDVPSLCIAIQA 346
           WD+M +IW + F  EL+V PEEHP+LLTE  LNPK NRE MT++MFE F+VP++ +AIQA
Sbjct: 81  WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQA 140

Query: 347 VLTMYNYGRTTGVVVELGDGVSEVVPIYEGYLLSDAMNRFNLAGQDLTDFLMNMLTESGK 526
           VL++Y  GRTTG+V++ GDGVS  VPIYEGY L  A+ R +LAG+DLTDF+M +LTE G 
Sbjct: 141 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIQRLDLAGRDLTDFMMKILTERGY 200

Query: 527 MFSTDAGQEIVCNIKEKLAYVAIDYEQE 610
            F+T A +EIV +IKEKL YVA+DYEQE
Sbjct: 201 SFTTTAEREIVRDIKEKLGYVALDYEQE 228


>gb|AAV83799.1| putative actin 1 [Chorispora bungeana]
          Length = 363

 Score =  254 bits (650), Expect = 7e-66
 Identities = 131/208 (62%), Positives = 160/208 (76%), Gaps = 5/208 (2%)
 Frame = +2

Query: 2   AGFAGDENPRVVFPSMVGRSRTQHFW----QKHAYVGDEAKSKIGDLNSAYPIDHGVVRD 169
           AGFAGD+ PR VFPS+VGR R         QK AYVGDEA+SK G L   YPI+HG+V D
Sbjct: 7   AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSD 66

Query: 170 WDNMVEIWDNIF-KELQVDPEEHPILLTEPALNPKENREDMTEVMFEIFDVPSLCIAIQA 346
           WD+M +IW + F  EL+V PEEHP+LLTE  LNPK NRE MT++MFE F+VP++ +AIQA
Sbjct: 67  WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQA 126

Query: 347 VLTMYNYGRTTGVVVELGDGVSEVVPIYEGYLLSDAMNRFNLAGQDLTDFLMNMLTESGK 526
           VL++Y  GRTTG+V++ GDGVS  VPIYEGY L  A+ R +LAG+DLTD LM +LTE G 
Sbjct: 127 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGY 186

Query: 527 MFSTDAGQEIVCNIKEKLAYVAIDYEQE 610
           MF+T A +EIV +IKEKLAYVA+DYEQE
Sbjct: 187 MFTTTAEREIVRDIKEKLAYVALDYEQE 214


>gb|AAD41039.1|AF112538_1 actin [Malva pusilla]
          Length = 377

 Score =  254 bits (648), Expect = 1e-65
 Identities = 130/208 (62%), Positives = 161/208 (77%), Gaps = 5/208 (2%)
 Frame = +2

Query: 2   AGFAGDENPRVVFPSMVGRSRTQHFW----QKHAYVGDEAKSKIGDLNSAYPIDHGVVRD 169
           AGFAGD+ PR VFPS+VGR R         QK AYVGDEA+SK G L   YPI+HG+VR+
Sbjct: 21  AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVRN 80

Query: 170 WDNMVEIWDNIF-KELQVDPEEHPILLTEPALNPKENREDMTEVMFEIFDVPSLCIAIQA 346
           WD+M +IW + F  EL+V PEEHP+LLTE  LNPK NRE MT++MFE F+VP++ +AIQA
Sbjct: 81  WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQA 140

Query: 347 VLTMYNYGRTTGVVVELGDGVSEVVPIYEGYLLSDAMNRFNLAGQDLTDFLMNMLTESGK 526
           VL++Y  GRTTG+V++ GDGVS  VPIYEGY L  A+ R +LAG+DLTD LM +LTE G 
Sbjct: 141 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGY 200

Query: 527 MFSTDAGQEIVCNIKEKLAYVAIDYEQE 610
           MF+T A +EIV ++KEKLAYVA+DYEQE
Sbjct: 201 MFTTTAEREIVRDMKEKLAYVALDYEQE 228


Top