BLASTX nr result
ID: Coptis24_contig00018122
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018122 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527764.1| eukaryotic translation initiation factor 2c,... 91 3e-30 ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife... 86 7e-30 gb|AFV15381.1| AGO4A [Solanum lycopersicum] 87 3e-28 ref|XP_002323196.1| argonaute protein group [Populus trichocarpa... 90 5e-28 ref|XP_002308843.1| argonaute protein group [Populus trichocarpa... 87 2e-27 >ref|XP_002527764.1| eukaryotic translation initiation factor 2c, putative [Ricinus communis] gi|223532851|gb|EEF34625.1| eukaryotic translation initiation factor 2c, putative [Ricinus communis] Length = 921 Score = 90.9 bits (224), Expect(2) = 3e-30 Identities = 51/102 (50%), Positives = 56/102 (54%), Gaps = 31/102 (30%) Frame = -2 Query: 215 NGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALAL-------------- 78 N P G GS +EGD KR RRP+QSKTFKV ISF AKIPM+AIA AL Sbjct: 164 NASPDGHGSPNEGDRKRMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEAIRV 223 Query: 77 -----------------HQSFFHNKPCNFCDLGGGALGCRGF 3 Q+FFHN P NF D+GGG LGCRGF Sbjct: 224 LDIILRQHAAKQGCLLVRQNFFHNDPKNFADVGGGVLGCRGF 265 Score = 66.2 bits (160), Expect(2) = 3e-30 Identities = 31/43 (72%), Positives = 38/43 (88%) Frame = -3 Query: 445 DKLHECYADTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLE 317 D++HE Y D+E+GGK FAYDGEK+LFTVG LP+NK +FTVVLE Sbjct: 113 DRVHETY-DSEMGGKKFAYDGEKSLFTVGALPRNKLEFTVVLE 154 >ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera] gi|296083994|emb|CBI24382.3| unnamed protein product [Vitis vinifera] Length = 913 Score = 85.9 bits (211), Expect(2) = 7e-30 Identities = 52/102 (50%), Positives = 55/102 (53%), Gaps = 31/102 (30%) Frame = -2 Query: 215 NGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALAL-------------- 78 NG P GS +E D KR RRP+QSKTFKV ISF AKIPM+AIA AL Sbjct: 153 NGSPD-RGSPNESDRKRMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRV 211 Query: 77 -----------------HQSFFHNKPCNFCDLGGGALGCRGF 3 QSFFHN P NF DLGGG LGCRGF Sbjct: 212 LDIILRQHASKQGCLLVRQSFFHNDPKNFIDLGGGVLGCRGF 253 Score = 69.7 bits (169), Expect(2) = 7e-30 Identities = 33/43 (76%), Positives = 39/43 (90%) Frame = -3 Query: 445 DKLHECYADTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLE 317 D++HE Y D+ELGGK FAYDGEK+LFTVGPLP+NK +FTVVLE Sbjct: 102 DRVHETY-DSELGGKDFAYDGEKSLFTVGPLPRNKLEFTVVLE 143 >gb|AFV15381.1| AGO4A [Solanum lycopersicum] Length = 909 Score = 86.7 bits (213), Expect(2) = 3e-28 Identities = 50/102 (49%), Positives = 54/102 (52%), Gaps = 31/102 (30%) Frame = -2 Query: 215 NGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALAL-------------- 78 N P G GS +E D KR RRP+QSKTFKV ISF AKIPM+AIA AL Sbjct: 150 NSSPGGHGSPNEADRKRLRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRV 209 Query: 77 -----------------HQSFFHNKPCNFCDLGGGALGCRGF 3 QSFFHN P NF D+G G LGCRGF Sbjct: 210 LDIILRQHAAKQGCLLVRQSFFHNDPKNFVDVGAGVLGCRGF 251 Score = 63.5 bits (153), Expect(2) = 3e-28 Identities = 30/43 (69%), Positives = 36/43 (83%) Frame = -3 Query: 445 DKLHECYADTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLE 317 D +HE Y DTEL GK FAYDGEK+LFT+G LP+NK +FTVVL+ Sbjct: 99 DTVHETY-DTELAGKDFAYDGEKSLFTIGALPRNKMEFTVVLD 140 >ref|XP_002323196.1| argonaute protein group [Populus trichocarpa] gi|222867826|gb|EEF04957.1| argonaute protein group [Populus trichocarpa] Length = 921 Score = 89.7 bits (221), Expect(2) = 5e-28 Identities = 52/106 (49%), Positives = 58/106 (54%), Gaps = 31/106 (29%) Frame = -2 Query: 227 RAAVNGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALAL---------- 78 R + NG P G+GS +E D KR RR FQSKTFKV +SF AKIPM+AIA AL Sbjct: 156 RNSGNGSPVGNGSPNETDKKRMRRAFQSKTFKVEMSFAAKIPMQAIAAALRGQESENSQE 215 Query: 77 ---------------------HQSFFHNKPCNFCDLGGGALGCRGF 3 QSFFHN P N+ DLGGG LGCRGF Sbjct: 216 ALRVLDIILRQHAAKQGCLLVRQSFFHNNPKNYVDLGGGVLGCRGF 261 Score = 59.7 bits (143), Expect(2) = 5e-28 Identities = 27/43 (62%), Positives = 36/43 (83%) Frame = -3 Query: 445 DKLHECYADTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLE 317 DK+HE Y ++L GK FAYDGEK+LFT+G LP+NK +FTV+L+ Sbjct: 109 DKVHETYG-SDLAGKDFAYDGEKSLFTIGALPRNKMEFTVLLD 150 >ref|XP_002308843.1| argonaute protein group [Populus trichocarpa] gi|222854819|gb|EEE92366.1| argonaute protein group [Populus trichocarpa] Length = 930 Score = 87.4 bits (215), Expect(2) = 2e-27 Identities = 51/106 (48%), Positives = 58/106 (54%), Gaps = 31/106 (29%) Frame = -2 Query: 227 RAAVNGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALAL---------- 78 R + NG P G+GS +E D KR RR FQSKTFKV +SF AKIPM+AIA AL Sbjct: 165 RNSGNGSPVGNGSPNETDKKRMRRAFQSKTFKVEMSFAAKIPMQAIAAALRGQESENSQE 224 Query: 77 ---------------------HQSFFHNKPCNFCDLGGGALGCRGF 3 QSFFH+ P N+ DLGGG LGCRGF Sbjct: 225 ALRVLDIILRQHAAKQGCLLVRQSFFHDDPKNYVDLGGGVLGCRGF 270 Score = 59.7 bits (143), Expect(2) = 2e-27 Identities = 27/43 (62%), Positives = 36/43 (83%) Frame = -3 Query: 445 DKLHECYADTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLE 317 DK+HE Y ++L GK FAYDGEK+LFT+G LP+NK +FTV+L+ Sbjct: 118 DKVHETYG-SDLAGKDFAYDGEKSLFTIGALPRNKMEFTVLLD 159