BLASTX nr result

ID: Coptis24_contig00018122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018122
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527764.1| eukaryotic translation initiation factor 2c,...    91   3e-30
ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife...    86   7e-30
gb|AFV15381.1| AGO4A [Solanum lycopersicum]                            87   3e-28
ref|XP_002323196.1| argonaute protein group [Populus trichocarpa...    90   5e-28
ref|XP_002308843.1| argonaute protein group [Populus trichocarpa...    87   2e-27

>ref|XP_002527764.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223532851|gb|EEF34625.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 921

 Score = 90.9 bits (224), Expect(2) = 3e-30
 Identities = 51/102 (50%), Positives = 56/102 (54%), Gaps = 31/102 (30%)
 Frame = -2

Query: 215 NGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALAL-------------- 78
           N  P G GS +EGD KR RRP+QSKTFKV ISF AKIPM+AIA AL              
Sbjct: 164 NASPDGHGSPNEGDRKRMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEAIRV 223

Query: 77  -----------------HQSFFHNKPCNFCDLGGGALGCRGF 3
                             Q+FFHN P NF D+GGG LGCRGF
Sbjct: 224 LDIILRQHAAKQGCLLVRQNFFHNDPKNFADVGGGVLGCRGF 265



 Score = 66.2 bits (160), Expect(2) = 3e-30
 Identities = 31/43 (72%), Positives = 38/43 (88%)
 Frame = -3

Query: 445 DKLHECYADTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLE 317
           D++HE Y D+E+GGK FAYDGEK+LFTVG LP+NK +FTVVLE
Sbjct: 113 DRVHETY-DSEMGGKKFAYDGEKSLFTVGALPRNKLEFTVVLE 154


>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
           gi|296083994|emb|CBI24382.3| unnamed protein product
           [Vitis vinifera]
          Length = 913

 Score = 85.9 bits (211), Expect(2) = 7e-30
 Identities = 52/102 (50%), Positives = 55/102 (53%), Gaps = 31/102 (30%)
 Frame = -2

Query: 215 NGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALAL-------------- 78
           NG P   GS +E D KR RRP+QSKTFKV ISF AKIPM+AIA AL              
Sbjct: 153 NGSPD-RGSPNESDRKRMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRV 211

Query: 77  -----------------HQSFFHNKPCNFCDLGGGALGCRGF 3
                             QSFFHN P NF DLGGG LGCRGF
Sbjct: 212 LDIILRQHASKQGCLLVRQSFFHNDPKNFIDLGGGVLGCRGF 253



 Score = 69.7 bits (169), Expect(2) = 7e-30
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = -3

Query: 445 DKLHECYADTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLE 317
           D++HE Y D+ELGGK FAYDGEK+LFTVGPLP+NK +FTVVLE
Sbjct: 102 DRVHETY-DSELGGKDFAYDGEKSLFTVGPLPRNKLEFTVVLE 143


>gb|AFV15381.1| AGO4A [Solanum lycopersicum]
          Length = 909

 Score = 86.7 bits (213), Expect(2) = 3e-28
 Identities = 50/102 (49%), Positives = 54/102 (52%), Gaps = 31/102 (30%)
 Frame = -2

Query: 215 NGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALAL-------------- 78
           N  P G GS +E D KR RRP+QSKTFKV ISF AKIPM+AIA AL              
Sbjct: 150 NSSPGGHGSPNEADRKRLRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRV 209

Query: 77  -----------------HQSFFHNKPCNFCDLGGGALGCRGF 3
                             QSFFHN P NF D+G G LGCRGF
Sbjct: 210 LDIILRQHAAKQGCLLVRQSFFHNDPKNFVDVGAGVLGCRGF 251



 Score = 63.5 bits (153), Expect(2) = 3e-28
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = -3

Query: 445 DKLHECYADTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLE 317
           D +HE Y DTEL GK FAYDGEK+LFT+G LP+NK +FTVVL+
Sbjct: 99  DTVHETY-DTELAGKDFAYDGEKSLFTIGALPRNKMEFTVVLD 140


>ref|XP_002323196.1| argonaute protein group [Populus trichocarpa]
           gi|222867826|gb|EEF04957.1| argonaute protein group
           [Populus trichocarpa]
          Length = 921

 Score = 89.7 bits (221), Expect(2) = 5e-28
 Identities = 52/106 (49%), Positives = 58/106 (54%), Gaps = 31/106 (29%)
 Frame = -2

Query: 227 RAAVNGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALAL---------- 78
           R + NG P G+GS +E D KR RR FQSKTFKV +SF AKIPM+AIA AL          
Sbjct: 156 RNSGNGSPVGNGSPNETDKKRMRRAFQSKTFKVEMSFAAKIPMQAIAAALRGQESENSQE 215

Query: 77  ---------------------HQSFFHNKPCNFCDLGGGALGCRGF 3
                                 QSFFHN P N+ DLGGG LGCRGF
Sbjct: 216 ALRVLDIILRQHAAKQGCLLVRQSFFHNNPKNYVDLGGGVLGCRGF 261



 Score = 59.7 bits (143), Expect(2) = 5e-28
 Identities = 27/43 (62%), Positives = 36/43 (83%)
 Frame = -3

Query: 445 DKLHECYADTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLE 317
           DK+HE Y  ++L GK FAYDGEK+LFT+G LP+NK +FTV+L+
Sbjct: 109 DKVHETYG-SDLAGKDFAYDGEKSLFTIGALPRNKMEFTVLLD 150


>ref|XP_002308843.1| argonaute protein group [Populus trichocarpa]
           gi|222854819|gb|EEE92366.1| argonaute protein group
           [Populus trichocarpa]
          Length = 930

 Score = 87.4 bits (215), Expect(2) = 2e-27
 Identities = 51/106 (48%), Positives = 58/106 (54%), Gaps = 31/106 (29%)
 Frame = -2

Query: 227 RAAVNGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALAL---------- 78
           R + NG P G+GS +E D KR RR FQSKTFKV +SF AKIPM+AIA AL          
Sbjct: 165 RNSGNGSPVGNGSPNETDKKRMRRAFQSKTFKVEMSFAAKIPMQAIAAALRGQESENSQE 224

Query: 77  ---------------------HQSFFHNKPCNFCDLGGGALGCRGF 3
                                 QSFFH+ P N+ DLGGG LGCRGF
Sbjct: 225 ALRVLDIILRQHAAKQGCLLVRQSFFHDDPKNYVDLGGGVLGCRGF 270



 Score = 59.7 bits (143), Expect(2) = 2e-27
 Identities = 27/43 (62%), Positives = 36/43 (83%)
 Frame = -3

Query: 445 DKLHECYADTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLE 317
           DK+HE Y  ++L GK FAYDGEK+LFT+G LP+NK +FTV+L+
Sbjct: 118 DKVHETYG-SDLAGKDFAYDGEKSLFTIGALPRNKMEFTVLLD 159


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