BLASTX nr result

ID: Coptis24_contig00018116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018116
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527493.1| conserved hypothetical protein [Ricinus comm...   244   2e-62
ref|XP_002263494.1| PREDICTED: uncharacterized protein LOC100256...   241   1e-61
emb|CAN72960.1| hypothetical protein VITISV_008500 [Vitis vinifera]   241   1e-61
ref|XP_002279502.1| PREDICTED: uncharacterized protein LOC100257...   239   6e-61
emb|CAN71564.1| hypothetical protein VITISV_007567 [Vitis vinifera]   239   6e-61

>ref|XP_002527493.1| conserved hypothetical protein [Ricinus communis]
           gi|223533133|gb|EEF34891.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 357

 Score =  244 bits (624), Expect = 2e-62
 Identities = 124/184 (67%), Positives = 146/184 (79%), Gaps = 1/184 (0%)
 Frame = +3

Query: 348 RIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICVRTIGKENVSLHNRLV 527
           RI+T+ELKA +VKKIGH+RADKYF  L+R F++K+ K EFDK+CVR IG+ENV LHNRL+
Sbjct: 9   RINTLELKALLVKKIGHERADKYFDQLTRLFTLKVAKCEFDKLCVRIIGRENVPLHNRLI 68

Query: 528 QAIIKNACLAKSAPTKGSK-VEGPLNVKVANGYHKSSPPSLSGDAFPPSPRKVRSSFIRD 704
           ++I+KNACLA   P KG K V   LNV+ ANGY ++   SL GDAFPPSPRK RS   RD
Sbjct: 69  RSIVKNACLANVPPPKGIKRVGSSLNVRTANGYQRNCLQSLYGDAFPPSPRKGRSPVNRD 128

Query: 705 RKFRDRPSPLGPNGKVNSVVCDESAAKVLEQQSATELLSLGSRPPIEVFSVEDGEEVEQM 884
           RKFRDRPSPLGP GK  S+VC+E  ++  EQQSATELLSLGSRPP EV SVE+GEEVEQ 
Sbjct: 129 RKFRDRPSPLGPLGKPQSMVCEELNSRAQEQQSATELLSLGSRPPAEVASVEEGEEVEQA 188

Query: 885 MGSP 896
            GSP
Sbjct: 189 AGSP 192


>ref|XP_002263494.1| PREDICTED: uncharacterized protein LOC100256708 [Vitis vinifera]
          Length = 354

 Score =  241 bits (616), Expect = 1e-61
 Identities = 122/187 (65%), Positives = 146/187 (78%)
 Frame = +3

Query: 336 KHLLRIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICVRTIGKENVSLH 515
           ++  RIDT+ELKA IV++IG Q+A+KYF  L R FS+K++K EFDK C+ TIG+EN+ LH
Sbjct: 5   QNFTRIDTLELKALIVRRIGRQKAEKYFDQLKRLFSLKLSKREFDKFCLWTIGRENIPLH 64

Query: 516 NRLVQAIIKNACLAKSAPTKGSKVEGPLNVKVANGYHKSSPPSLSGDAFPPSPRKVRSSF 695
           NRL+ +I+KNACL+K  P KG  V  P +VKVANGY ++   SL GDAFPPSPRK RS  
Sbjct: 65  NRLIGSILKNACLSKVPPLKGRNVGVPKDVKVANGYQRNCLQSLYGDAFPPSPRKGRSQV 124

Query: 696 IRDRKFRDRPSPLGPNGKVNSVVCDESAAKVLEQQSATELLSLGSRPPIEVFSVEDGEEV 875
            RDR+FRDR SPLGP GK  SV C+E A+K  EQQSATELLSLGSRPP EV SVEDGEEV
Sbjct: 125 NRDRRFRDRLSPLGPLGKPQSVACEELASKAQEQQSATELLSLGSRPPGEVVSVEDGEEV 184

Query: 876 EQMMGSP 896
           EQ+ GSP
Sbjct: 185 EQLAGSP 191


>emb|CAN72960.1| hypothetical protein VITISV_008500 [Vitis vinifera]
          Length = 354

 Score =  241 bits (616), Expect = 1e-61
 Identities = 122/187 (65%), Positives = 146/187 (78%)
 Frame = +3

Query: 336 KHLLRIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICVRTIGKENVSLH 515
           ++  RIDT+ELKA IV++IG Q+A+KYF  L R FS+K++K EFDK C+ TIG+EN+ LH
Sbjct: 5   QNFTRIDTLELKALIVRRIGRQKAEKYFDQLKRLFSLKLSKREFDKFCLWTIGRENIPLH 64

Query: 516 NRLVQAIIKNACLAKSAPTKGSKVEGPLNVKVANGYHKSSPPSLSGDAFPPSPRKVRSSF 695
           NRL+ +I+KNACL+K  P KG  V  P +VKVANGY ++   SL GDAFPPSPRK RS  
Sbjct: 65  NRLIGSILKNACLSKVPPLKGRNVGVPKDVKVANGYQRNCLQSLYGDAFPPSPRKGRSQV 124

Query: 696 IRDRKFRDRPSPLGPNGKVNSVVCDESAAKVLEQQSATELLSLGSRPPIEVFSVEDGEEV 875
            RDR+FRDR SPLGP GK  SV C+E A+K  EQQSATELLSLGSRPP EV SVEDGEEV
Sbjct: 125 NRDRRFRDRLSPLGPLGKPQSVACEELASKAQEQQSATELLSLGSRPPGEVVSVEDGEEV 184

Query: 876 EQMMGSP 896
           EQ+ GSP
Sbjct: 185 EQLAGSP 191


>ref|XP_002279502.1| PREDICTED: uncharacterized protein LOC100257838 [Vitis vinifera]
          Length = 331

 Score =  239 bits (610), Expect = 6e-61
 Identities = 119/187 (63%), Positives = 150/187 (80%)
 Frame = +3

Query: 336 KHLLRIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICVRTIGKENVSLH 515
           ++  RI T+ELK QI KK+G  +A+KYF  L+++ S+K++K+EF+K+C+ TIG+ENV LH
Sbjct: 5   RNFSRIHTLELKIQIEKKLGRAKAEKYFDLLTKYLSLKLSKNEFNKLCIDTIGRENVLLH 64

Query: 516 NRLVQAIIKNACLAKSAPTKGSKVEGPLNVKVANGYHKSSPPSLSGDAFPPSPRKVRSSF 695
           N+L+ +IIKNACL+KS P K SK EG LNVKVANGY +SS  S+  D FP SPRK R+  
Sbjct: 65  NQLIGSIIKNACLSKSPPPKQSKTEGSLNVKVANGYQRSSLQSICRDVFPQSPRKGRTPS 124

Query: 696 IRDRKFRDRPSPLGPNGKVNSVVCDESAAKVLEQQSATELLSLGSRPPIEVFSVEDGEEV 875
           +RDRKFRDRPSPLGP+GK +SVVC+++  K+ EQQSATELLSLGSRPP EV SVEDGEEV
Sbjct: 125 LRDRKFRDRPSPLGPHGKNHSVVCEDTVPKIQEQQSATELLSLGSRPPGEVNSVEDGEEV 184

Query: 876 EQMMGSP 896
           EQ   SP
Sbjct: 185 EQAARSP 191


>emb|CAN71564.1| hypothetical protein VITISV_007567 [Vitis vinifera]
          Length = 355

 Score =  239 bits (610), Expect = 6e-61
 Identities = 119/187 (63%), Positives = 150/187 (80%)
 Frame = +3

Query: 336 KHLLRIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICVRTIGKENVSLH 515
           ++  RI T+ELK QI KK+G  +A+KYF  L+++ S+K++K+EF+K+C+ TIG+ENV LH
Sbjct: 5   RNFSRIHTLELKIQIEKKLGRAKAEKYFDLLTKYLSLKLSKNEFNKLCIDTIGRENVLLH 64

Query: 516 NRLVQAIIKNACLAKSAPTKGSKVEGPLNVKVANGYHKSSPPSLSGDAFPPSPRKVRSSF 695
           N+L+ +IIKNACL+KS P K SK EG LNVKVANGY +SS  S+  D FP SPRK R+  
Sbjct: 65  NQLIGSIIKNACLSKSPPPKQSKTEGSLNVKVANGYQRSSLQSICRDVFPQSPRKGRTPS 124

Query: 696 IRDRKFRDRPSPLGPNGKVNSVVCDESAAKVLEQQSATELLSLGSRPPIEVFSVEDGEEV 875
           +RDRKFRDRPSPLGP+GK +SVVC+++  K+ EQQSATELLSLGSRPP EV SVEDGEEV
Sbjct: 125 LRDRKFRDRPSPLGPHGKNHSVVCEDTVPKIQEQQSATELLSLGSRPPGEVNSVEDGEEV 184

Query: 876 EQMMGSP 896
           EQ   SP
Sbjct: 185 EQAARSP 191


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