BLASTX nr result

ID: Coptis24_contig00018114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018114
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYL...   119   3e-25
emb|CBI27421.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_004155371.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   116   2e-24
ref|XP_004135420.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   116   2e-24
ref|XP_003572658.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   116   2e-24

>ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYLLO, chloroplastic-like
            [Vitis vinifera]
          Length = 1614

 Score =  119 bits (297), Expect = 3e-25
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%)
 Frame = -3

Query: 350  VRCGMEMAVLNVLAVKEGCSLAGLLHHECSTSKSQFDEEKELSVSSK-VHICALIDSYAI 174
            VRCG+EMA+LN +A +EG SL  +LH         +  E+E+S  SK V ICAL+DS   
Sbjct: 995  VRCGLEMAILNAIAAQEGSSLLNILH--------PYKVEEEISERSKRVQICALLDSNGS 1046

Query: 173  PEEVAEVADKLVKEGFSTIKIKVGRRPYPSEDAAVIQEIRKKVGYRVKLRADANRSW 3
            P EVA +A  LV+EGF+ IK+KV RR  P EDA VIQEIRK VG +++LRADANR+W
Sbjct: 1047 PLEVAYLAKTLVEEGFTAIKLKVARRADPIEDATVIQEIRKMVGLQIELRADANRNW 1103


>emb|CBI27421.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  119 bits (297), Expect = 3e-25
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%)
 Frame = -3

Query: 350 VRCGMEMAVLNVLAVKEGCSLAGLLHHECSTSKSQFDEEKELSVSSK-VHICALIDSYAI 174
           VRCG+EMA+LN +A +EG SL  +LH         +  E+E+S  SK V ICAL+DS   
Sbjct: 332 VRCGLEMAILNAIAAQEGSSLLNILH--------PYKVEEEISERSKRVQICALLDSNGS 383

Query: 173 PEEVAEVADKLVKEGFSTIKIKVGRRPYPSEDAAVIQEIRKKVGYRVKLRADANRSW 3
           P EVA +A  LV+EGF+ IK+KV RR  P EDA VIQEIRK VG +++LRADANR+W
Sbjct: 384 PLEVAYLAKTLVEEGFTAIKLKVARRADPIEDATVIQEIRKMVGLQIELRADANRNW 440


>ref|XP_004155371.1| PREDICTED: protein PHYLLO, chloroplastic-like [Cucumis sativus]
          Length = 1794

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/116 (52%), Positives = 78/116 (67%)
 Frame = -3

Query: 350  VRCGMEMAVLNVLAVKEGCSLAGLLHHECSTSKSQFDEEKELSVSSKVHICALIDSYAIP 171
            VRCG+EMAVL+ +A ++GC L  +L H       Q DEEK L   SKV IC L+DS   P
Sbjct: 1167 VRCGLEMAVLHAIAGRKGCGLLDVLQH-------QLDEEKNLKTLSKVQICGLLDSGGTP 1219

Query: 170  EEVAEVADKLVKEGFSTIKIKVGRRPYPSEDAAVIQEIRKKVGYRVKLRADANRSW 3
             EVA VA  LV+EGF  IK+K  R+     DAAV+QE+RKK+G +++LR DANR+W
Sbjct: 1220 SEVALVAKTLVEEGFPAIKLKETRQRNVMYDAAVVQEVRKKLGNQIELRVDANRNW 1275


>ref|XP_004135420.1| PREDICTED: protein PHYLLO, chloroplastic-like [Cucumis sativus]
          Length = 1794

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/116 (52%), Positives = 78/116 (67%)
 Frame = -3

Query: 350  VRCGMEMAVLNVLAVKEGCSLAGLLHHECSTSKSQFDEEKELSVSSKVHICALIDSYAIP 171
            VRCG+EMAVL+ +A ++GC L  +L H       Q DEEK L   SKV IC L+DS   P
Sbjct: 1167 VRCGLEMAVLHAIAGRKGCGLLDVLQH-------QLDEEKNLKTLSKVQICGLLDSGGTP 1219

Query: 170  EEVAEVADKLVKEGFSTIKIKVGRRPYPSEDAAVIQEIRKKVGYRVKLRADANRSW 3
             EVA VA  LV+EGF  IK+K  R+     DAAV+QE+RKK+G +++LR DANR+W
Sbjct: 1220 SEVALVAKTLVEEGFPAIKLKETRQRNVMYDAAVVQEVRKKLGNQIELRVDANRNW 1275


>ref|XP_003572658.1| PREDICTED: protein PHYLLO, chloroplastic-like [Brachypodium
            distachyon]
          Length = 1608

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/116 (50%), Positives = 79/116 (68%)
 Frame = -3

Query: 350  VRCGMEMAVLNVLAVKEGCSLAGLLHHECSTSKSQFDEEKELSVSSKVHICALIDSYAIP 171
            V+CG+EMA+LN+LA ++ C L+ +L       + Q   E   + S  + ICAL+DS   P
Sbjct: 998  VKCGLEMAILNLLASRQKCRLSEILTGPNPLLRDQSLVEYNRNSSESIQICALLDSNDTP 1057

Query: 170  EEVAEVADKLVKEGFSTIKIKVGRRPYPSEDAAVIQEIRKKVGYRVKLRADANRSW 3
             EVA    KLV EGF+T+K+KVGRR  P+EDAAVIQ+IR+ VGY + +RADANR W
Sbjct: 1058 MEVALAVAKLVAEGFTTVKLKVGRRESPTEDAAVIQKIREVVGYNINIRADANRKW 1113


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