BLASTX nr result

ID: Coptis24_contig00018113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018113
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519583.1| PREDICTED: uncharacterized protein LOC100798...    58   1e-06
ref|XP_003617587.1| Rab3 GTPase-activating protein catalytic sub...    56   5e-06
ref|XP_003544849.1| PREDICTED: uncharacterized protein LOC100818...    55   6e-06

>ref|XP_003519583.1| PREDICTED: uncharacterized protein LOC100798096 [Glycine max]
          Length = 696

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/42 (66%), Positives = 36/42 (85%)
 Frame = +2

Query: 38  ERAGLNFSAVKSLVLREKEDKSTSDFRDDDELLLLNQSLFDP 163
           ERAGL+FSAVK+LVLREKEDK TS+F  +++++ L  SLFDP
Sbjct: 185 ERAGLSFSAVKALVLREKEDKLTSEFTSNEKVVQLINSLFDP 226


>ref|XP_003617587.1| Rab3 GTPase-activating protein catalytic subunit [Medicago
           truncatula] gi|355518922|gb|AET00546.1| Rab3
           GTPase-activating protein catalytic subunit [Medicago
           truncatula]
          Length = 705

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = +2

Query: 38  ERAGLNFSAVKSLVLREKEDKSTSDFRDDDELLLLNQSLFDPG 166
           ER GL+ SAVK+LVLREKEDK TS+F  +++++ L  SLFDPG
Sbjct: 181 ERGGLSLSAVKALVLREKEDKLTSEFSSNEKVVHLINSLFDPG 223


>ref|XP_003544849.1| PREDICTED: uncharacterized protein LOC100818643 [Glycine max]
          Length = 697

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 27/42 (64%), Positives = 35/42 (83%)
 Frame = +2

Query: 38  ERAGLNFSAVKSLVLREKEDKSTSDFRDDDELLLLNQSLFDP 163
           ERAGL+ SAVK+LVLREKEDK TS+F  +++++ L  SLFDP
Sbjct: 186 ERAGLSLSAVKALVLREKEDKLTSEFTSNEKVVQLINSLFDP 227


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