BLASTX nr result
ID: Coptis24_contig00018111
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018111 (448 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266656.1| PREDICTED: uncharacterized protein LOC100256... 44 3e-09 emb|CBI15290.3| unnamed protein product [Vitis vinifera] 44 3e-09 ref|XP_002321538.1| predicted protein [Populus trichocarpa] gi|2... 42 6e-08 >ref|XP_002266656.1| PREDICTED: uncharacterized protein LOC100256959 [Vitis vinifera] Length = 1653 Score = 43.5 bits (101), Expect(2) = 3e-09 Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 3/64 (4%) Frame = -1 Query: 436 FEPRVITDILKEAQSLH---FAEEQIPNSVTAGVCDWEIIEDSEAARQDTLYKAETCIIE 266 FE + ++LKEA+SL+ F E+ N VT+ +CD E ED + +D L++ + CI Sbjct: 818 FELDAVINVLKEAESLNMNQFGYEEHYNGVTSHLCDLESGEDDDWRSKDFLHQMDACIEV 877 Query: 265 AVRR 254 A++R Sbjct: 878 AIQR 881 Score = 42.4 bits (98), Expect(2) = 3e-09 Identities = 25/83 (30%), Positives = 45/83 (54%) Frame = -2 Query: 249 KNIELKLINKDASINRTAEDMERLELKITPFAAHDWRXXXXXXXXXXXXXXLEELADEHA 70 + + ++L DA I R M++LEL + P +A D+R LE+LA++ A Sbjct: 884 EQLSVELSKIDARIMRNVTGMQQLELTLEPVSAFDYRSIILPLLKSFMRAHLEDLAEKDA 943 Query: 69 SKQSDAVKEATKAICTPDADETS 1 +++SDA +EA A D+ +++ Sbjct: 944 TQKSDAAREAFLAELALDSKKSA 966 >emb|CBI15290.3| unnamed protein product [Vitis vinifera] Length = 1552 Score = 43.5 bits (101), Expect(2) = 3e-09 Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 3/64 (4%) Frame = -1 Query: 436 FEPRVITDILKEAQSLH---FAEEQIPNSVTAGVCDWEIIEDSEAARQDTLYKAETCIIE 266 FE + ++LKEA+SL+ F E+ N VT+ +CD E ED + +D L++ + CI Sbjct: 717 FELDAVINVLKEAESLNMNQFGYEEHYNGVTSHLCDLESGEDDDWRSKDFLHQMDACIEV 776 Query: 265 AVRR 254 A++R Sbjct: 777 AIQR 780 Score = 42.4 bits (98), Expect(2) = 3e-09 Identities = 25/83 (30%), Positives = 45/83 (54%) Frame = -2 Query: 249 KNIELKLINKDASINRTAEDMERLELKITPFAAHDWRXXXXXXXXXXXXXXLEELADEHA 70 + + ++L DA I R M++LEL + P +A D+R LE+LA++ A Sbjct: 783 EQLSVELSKIDARIMRNVTGMQQLELTLEPVSAFDYRSIILPLLKSFMRAHLEDLAEKDA 842 Query: 69 SKQSDAVKEATKAICTPDADETS 1 +++SDA +EA A D+ +++ Sbjct: 843 TQKSDAAREAFLAELALDSKKSA 865 >ref|XP_002321538.1| predicted protein [Populus trichocarpa] gi|222868534|gb|EEF05665.1| predicted protein [Populus trichocarpa] Length = 783 Score = 41.6 bits (96), Expect(2) = 6e-08 Identities = 23/70 (32%), Positives = 40/70 (57%) Frame = -2 Query: 249 KNIELKLINKDASINRTAEDMERLELKITPFAAHDWRXXXXXXXXXXXXXXLEELADEHA 70 +++ ++L DA I R M++LELK+ +A D+R LE+LA++ A Sbjct: 653 EHLSIELSKIDAQIMRNVSGMQQLELKLESVSALDYRSILLPLVKSYMRAHLEDLAEKDA 712 Query: 69 SKQSDAVKEA 40 +++SDA +EA Sbjct: 713 TEKSDAAREA 722 Score = 40.0 bits (92), Expect(2) = 6e-08 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Frame = -1 Query: 436 FEPRVITDILKEAQSLH---FAEEQIPNSVTAGVCDWEIIEDSEAARQDTLYKAETCIIE 266 FE I ++LKEA +L+ F E +T+ CD E ED +D +++ ETCI Sbjct: 587 FELDAILNVLKEADTLNANQFGYEDTYGGITSQFCDLESGEDGNWRTKDHMHQVETCIEI 646 Query: 265 AVRR 254 A++R Sbjct: 647 AIQR 650