BLASTX nr result

ID: Coptis24_contig00018111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018111
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266656.1| PREDICTED: uncharacterized protein LOC100256...    44   3e-09
emb|CBI15290.3| unnamed protein product [Vitis vinifera]               44   3e-09
ref|XP_002321538.1| predicted protein [Populus trichocarpa] gi|2...    42   6e-08

>ref|XP_002266656.1| PREDICTED: uncharacterized protein LOC100256959 [Vitis vinifera]
          Length = 1653

 Score = 43.5 bits (101), Expect(2) = 3e-09
 Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
 Frame = -1

Query: 436  FEPRVITDILKEAQSLH---FAEEQIPNSVTAGVCDWEIIEDSEAARQDTLYKAETCIIE 266
            FE   + ++LKEA+SL+   F  E+  N VT+ +CD E  ED +   +D L++ + CI  
Sbjct: 818  FELDAVINVLKEAESLNMNQFGYEEHYNGVTSHLCDLESGEDDDWRSKDFLHQMDACIEV 877

Query: 265  AVRR 254
            A++R
Sbjct: 878  AIQR 881



 Score = 42.4 bits (98), Expect(2) = 3e-09
 Identities = 25/83 (30%), Positives = 45/83 (54%)
 Frame = -2

Query: 249  KNIELKLINKDASINRTAEDMERLELKITPFAAHDWRXXXXXXXXXXXXXXLEELADEHA 70
            + + ++L   DA I R    M++LEL + P +A D+R              LE+LA++ A
Sbjct: 884  EQLSVELSKIDARIMRNVTGMQQLELTLEPVSAFDYRSIILPLLKSFMRAHLEDLAEKDA 943

Query: 69   SKQSDAVKEATKAICTPDADETS 1
            +++SDA +EA  A    D+ +++
Sbjct: 944  TQKSDAAREAFLAELALDSKKSA 966


>emb|CBI15290.3| unnamed protein product [Vitis vinifera]
          Length = 1552

 Score = 43.5 bits (101), Expect(2) = 3e-09
 Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
 Frame = -1

Query: 436 FEPRVITDILKEAQSLH---FAEEQIPNSVTAGVCDWEIIEDSEAARQDTLYKAETCIIE 266
           FE   + ++LKEA+SL+   F  E+  N VT+ +CD E  ED +   +D L++ + CI  
Sbjct: 717 FELDAVINVLKEAESLNMNQFGYEEHYNGVTSHLCDLESGEDDDWRSKDFLHQMDACIEV 776

Query: 265 AVRR 254
           A++R
Sbjct: 777 AIQR 780



 Score = 42.4 bits (98), Expect(2) = 3e-09
 Identities = 25/83 (30%), Positives = 45/83 (54%)
 Frame = -2

Query: 249  KNIELKLINKDASINRTAEDMERLELKITPFAAHDWRXXXXXXXXXXXXXXLEELADEHA 70
            + + ++L   DA I R    M++LEL + P +A D+R              LE+LA++ A
Sbjct: 783  EQLSVELSKIDARIMRNVTGMQQLELTLEPVSAFDYRSIILPLLKSFMRAHLEDLAEKDA 842

Query: 69   SKQSDAVKEATKAICTPDADETS 1
            +++SDA +EA  A    D+ +++
Sbjct: 843  TQKSDAAREAFLAELALDSKKSA 865


>ref|XP_002321538.1| predicted protein [Populus trichocarpa] gi|222868534|gb|EEF05665.1|
           predicted protein [Populus trichocarpa]
          Length = 783

 Score = 41.6 bits (96), Expect(2) = 6e-08
 Identities = 23/70 (32%), Positives = 40/70 (57%)
 Frame = -2

Query: 249 KNIELKLINKDASINRTAEDMERLELKITPFAAHDWRXXXXXXXXXXXXXXLEELADEHA 70
           +++ ++L   DA I R    M++LELK+   +A D+R              LE+LA++ A
Sbjct: 653 EHLSIELSKIDAQIMRNVSGMQQLELKLESVSALDYRSILLPLVKSYMRAHLEDLAEKDA 712

Query: 69  SKQSDAVKEA 40
           +++SDA +EA
Sbjct: 713 TEKSDAAREA 722



 Score = 40.0 bits (92), Expect(2) = 6e-08
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = -1

Query: 436 FEPRVITDILKEAQSLH---FAEEQIPNSVTAGVCDWEIIEDSEAARQDTLYKAETCIIE 266
           FE   I ++LKEA +L+   F  E     +T+  CD E  ED     +D +++ ETCI  
Sbjct: 587 FELDAILNVLKEADTLNANQFGYEDTYGGITSQFCDLESGEDGNWRTKDHMHQVETCIEI 646

Query: 265 AVRR 254
           A++R
Sbjct: 647 AIQR 650


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