BLASTX nr result

ID: Coptis24_contig00018105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018105
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276796.2| PREDICTED: protein TIC110, chloroplastic-lik...    58   9e-07
emb|CAN60839.1| hypothetical protein VITISV_038562 [Vitis vinifera]    58   9e-07

>ref|XP_002276796.2| PREDICTED: protein TIC110, chloroplastic-like [Vitis vinifera]
           gi|297745792|emb|CBI15848.3| unnamed protein product
           [Vitis vinifera]
          Length = 1007

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/71 (43%), Positives = 37/71 (52%)
 Frame = +3

Query: 3   LSGIQILVDSLSPSIRLXXXXXXXXXXXXXXYGLGFKFGGNRNTXXXXXXXXXXXXXXXV 182
           LSGIQ LVDSLSP +RL              YGLGF+FG +RNT                
Sbjct: 70  LSGIQPLVDSLSPPLRLVSSALIVAGAIAAGYGLGFRFGKSRNTALGGAVAIGAAGGAAA 129

Query: 183 YGMNSCVPDVA 215
           Y +N+CVP+VA
Sbjct: 130 YALNACVPEVA 140


>emb|CAN60839.1| hypothetical protein VITISV_038562 [Vitis vinifera]
          Length = 1061

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/71 (43%), Positives = 37/71 (52%)
 Frame = +3

Query: 3   LSGIQILVDSLSPSIRLXXXXXXXXXXXXXXYGLGFKFGGNRNTXXXXXXXXXXXXXXXV 182
           LSGIQ LVDSLSP +RL              YGLGF+FG +RNT                
Sbjct: 70  LSGIQPLVDSLSPPLRLVSSALIVAGAIAAGYGLGFRFGKSRNTALGGAVAIGAAGGAAA 129

Query: 183 YGMNSCVPDVA 215
           Y +N+CVP+VA
Sbjct: 130 YALNACVPEVA 140


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