BLASTX nr result

ID: Coptis24_contig00018104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018104
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24060.3| unnamed protein product [Vitis vinifera]              186   1e-44
ref|XP_002265949.1| PREDICTED: uncharacterized protein LOC100244...   186   1e-44
ref|XP_004152859.1| PREDICTED: uncharacterized protein LOC101216...   159   2e-36
ref|XP_004172869.1| PREDICTED: uncharacterized LOC101216928 [Cuc...   154   3e-35
ref|XP_002331407.1| predicted protein [Populus trichocarpa] gi|2...   138   3e-30

>emb|CBI24060.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score =  186 bits (472), Expect = 1e-44
 Identities = 118/246 (47%), Positives = 154/246 (62%), Gaps = 32/246 (13%)
 Frame = -1

Query: 1013 RPSINLSLFTN--------FSDENGSNNSSKSPRNFEYGVVGLGIVAAMND---AHQDVI 867
            R ++NLSLFTN        +S ++  ++++KSPRNFE GVVGLGIVAA+ND    H+ + 
Sbjct: 64   RLAMNLSLFTNSFEPKSQVWSLDSKVSSTTKSPRNFEGGVVGLGIVAALNDLDNTHESLS 123

Query: 866  SSVKTTTKLDKMS-KSEPIPIV---LSKPVVEK--------DEVMELSESYTCVVSNLGH 723
            S     + L   S +S PIPI       P VEK        +  ME+SESYTCV+S+ G+
Sbjct: 124  SKPCKASILAATSPRSNPIPIANRAKHMPKVEKCRPSSGMMEMEMEMSESYTCVISHCGN 183

Query: 722  G--RKKEYFDDERISGKSGYRGGGVFFTSPLKDTGQGIML-------FQSADFLTSCYLC 570
               +K+ YFDD     K       +    P+  T     +       F++ADFL+SCYLC
Sbjct: 184  NLIKKRVYFDD-----KPNGVVDDITTAVPISSTDAAYWVASEAAPPFKTADFLSSCYLC 238

Query: 569  KKKLHGLDIFMYRGDKAFCSAECRCKQILSDERRQKKCVSGALKSFDYSLSPCSAPRIFS 390
            +KKLHGLDIFMYRG+KAFCSAECR  Q++SDE ++ KC S A+KSFDYS+SPCS P +F 
Sbjct: 239  QKKLHGLDIFMYRGEKAFCSAECRSNQMVSDEYKE-KCGSEAMKSFDYSVSPCSGPMLFF 297

Query: 389  AGVAAA 372
            AGVAAA
Sbjct: 298  AGVAAA 303


>ref|XP_002265949.1| PREDICTED: uncharacterized protein LOC100244902 isoform 1 [Vitis
            vinifera]
          Length = 267

 Score =  186 bits (472), Expect = 1e-44
 Identities = 118/246 (47%), Positives = 154/246 (62%), Gaps = 32/246 (13%)
 Frame = -1

Query: 1013 RPSINLSLFTN--------FSDENGSNNSSKSPRNFEYGVVGLGIVAAMND---AHQDVI 867
            R ++NLSLFTN        +S ++  ++++KSPRNFE GVVGLGIVAA+ND    H+ + 
Sbjct: 28   RLAMNLSLFTNSFEPKSQVWSLDSKVSSTTKSPRNFEGGVVGLGIVAALNDLDNTHESLS 87

Query: 866  SSVKTTTKLDKMS-KSEPIPIV---LSKPVVEK--------DEVMELSESYTCVVSNLGH 723
            S     + L   S +S PIPI       P VEK        +  ME+SESYTCV+S+ G+
Sbjct: 88   SKPCKASILAATSPRSNPIPIANRAKHMPKVEKCRPSSGMMEMEMEMSESYTCVISHCGN 147

Query: 722  G--RKKEYFDDERISGKSGYRGGGVFFTSPLKDTGQGIML-------FQSADFLTSCYLC 570
               +K+ YFDD     K       +    P+  T     +       F++ADFL+SCYLC
Sbjct: 148  NLIKKRVYFDD-----KPNGVVDDITTAVPISSTDAAYWVASEAAPPFKTADFLSSCYLC 202

Query: 569  KKKLHGLDIFMYRGDKAFCSAECRCKQILSDERRQKKCVSGALKSFDYSLSPCSAPRIFS 390
            +KKLHGLDIFMYRG+KAFCSAECR  Q++SDE ++ KC S A+KSFDYS+SPCS P +F 
Sbjct: 203  QKKLHGLDIFMYRGEKAFCSAECRSNQMVSDEYKE-KCGSEAMKSFDYSVSPCSGPMLFF 261

Query: 389  AGVAAA 372
            AGVAAA
Sbjct: 262  AGVAAA 267


>ref|XP_004152859.1| PREDICTED: uncharacterized protein LOC101216928 [Cucumis sativus]
          Length = 234

 Score =  159 bits (401), Expect = 2e-36
 Identities = 114/238 (47%), Positives = 146/238 (61%), Gaps = 23/238 (9%)
 Frame = -1

Query: 1016 KRPSINLSLFTNFSDENGSNNSSKSPRNFEYGVVGLGIVAAMNDA---HQDVISSVKTTT 846
            ++P+I +SLFT  S  + S++ +KSPR+FE GVVGLGIVAAM D+   H+  +SS   + 
Sbjct: 8    RKPTIGISLFTALSG-SFSSDKTKSPRDFEKGVVGLGIVAAMTDSDKIHEAFVSSKAVSP 66

Query: 845  KLDKMSKSEPIPIVLS-KPV--------VEKDE----VMELSESYTCVVSNLGHG--RKK 711
            +      S  IPIV S KP         +EK+     V ELSESYTCV S+ G+    K+
Sbjct: 67   R------SCSIPIVSSAKPAANFRGGFNLEKETLPEVVDELSESYTCVTSHFGNRLFEKR 120

Query: 710  EYFDDER--ISGKSG-YRGGGVFFTSPLKDTGQGIMLFQSADFLTSCYLCKKKLHGLDIF 540
             YF+ E   ++G+S      GVF TSP+   G     F +A+FL+SCYLC K LHGLDIF
Sbjct: 121  VYFNGELDLVNGRSSNIVRSGVFSTSPMS-FGVAERGFCAAEFLSSCYLCSKHLHGLDIF 179

Query: 539  MYRGDKAFCSAECRCKQILSDERRQKKCVSGALKSFDYSLSPCS--APRIFSAGVAAA 372
            MYRG+KAFCS ECR K I  D+ R  KC S A+K  DYS SPCS   P   ++GV AA
Sbjct: 180  MYRGEKAFCSVECRDKHIRGDDCRD-KCGSKAMK--DYSASPCSVAGPPALASGVVAA 234


>ref|XP_004172869.1| PREDICTED: uncharacterized LOC101216928 [Cucumis sativus]
          Length = 236

 Score =  154 bits (390), Expect = 3e-35
 Identities = 109/224 (48%), Positives = 139/224 (62%), Gaps = 21/224 (9%)
 Frame = -1

Query: 1016 KRPSINLSLFTNFSDENGSNNSSKSPRNFEYGVVGLGIVAAMNDA---HQDVISSVKTTT 846
            ++P+I +SLFT  S  + S++ +KSPR+FE GVVGLGIVAAM D+   H+  +SS   + 
Sbjct: 8    RKPTIGISLFTALSG-SFSSDKTKSPRDFEKGVVGLGIVAAMTDSDKIHEAFVSSKAVSP 66

Query: 845  KLDKMSKSEPIPIVLS-KPV--------VEKDE----VMELSESYTCVVSNLGHG--RKK 711
            +      S  IPIV S KP         +EK+     V ELSESYTCV S+ G+    K+
Sbjct: 67   R------SCSIPIVSSAKPAANFRGGFNLEKETLPEVVDELSESYTCVTSHFGNRLFEKR 120

Query: 710  EYFDDER--ISGKSG-YRGGGVFFTSPLKDTGQGIMLFQSADFLTSCYLCKKKLHGLDIF 540
             YF+ E   ++G+S      GVF TSP+   G     F +A+FL+SCYLC K LHGLDIF
Sbjct: 121  VYFNGELDLVNGRSSNIVRSGVFSTSPMS-FGVAERGFCAAEFLSSCYLCSKHLHGLDIF 179

Query: 539  MYRGDKAFCSAECRCKQILSDERRQKKCVSGALKSFDYSLSPCS 408
            MYRG+KAFCS ECR K I  D+ R  KC S A+K  DYS SPCS
Sbjct: 180  MYRGEKAFCSVECRDKHIRGDDCRD-KCGSKAMK--DYSASPCS 220


>ref|XP_002331407.1| predicted protein [Populus trichocarpa] gi|222873621|gb|EEF10752.1|
            predicted protein [Populus trichocarpa]
          Length = 234

 Score =  138 bits (347), Expect = 3e-30
 Identities = 99/242 (40%), Positives = 137/242 (56%), Gaps = 27/242 (11%)
 Frame = -1

Query: 1016 KRPSINLSLFTNFSDENGSNNSSKSPRNFEYG--VVGLGIVAAMNDAHQDVISSVKTTTK 843
            KRP I+LSLFT  ++     N  KSPRNF+ G   VGLGIVAAM+++  D +S    + +
Sbjct: 4    KRPRISLSLFTTLTETFSMAN--KSPRNFKNGGSAVGLGIVAAMDES--DKVSDFALSPR 59

Query: 842  LDKMSKSEPIPIV-LSKPV------------VEKDEVM--ELSESYTCVVSNLGHG--RK 714
                  S P+P+V L KP              +K  V+  E  ESYTCV+S++G+   +K
Sbjct: 60   ------SSPVPVVSLKKPASCFKEGGIGVWNFDKGGVVVDENDESYTCVISHVGNNVIKK 113

Query: 713  KEYFDDERISGKSGYR--GGGVFFTS------PLKDTGQGIMLFQSADFLTSCYLCKKKL 558
              Y+DD+       +   G G+ + +      P+         F S DFL+SC+LCKK L
Sbjct: 114  SVYYDDKVCVDSVSWFDVGSGLLYAASPAVMMPIDVATAERREFWSKDFLSSCHLCKKLL 173

Query: 557  HGLDIFMYRGDKAFCSAECRCKQILSDERRQKKCVSGALKSFDYSLSPCSAPRIFSAGVA 378
             GLDIFMYRG+ AFCS ECR K I  ++ ++K   S A K  + S++PCS+P +F AGVA
Sbjct: 174  EGLDIFMYRGENAFCSPECRDKHIRIEDFKEKS-GSEARKKQECSVTPCSSPLLFFAGVA 232

Query: 377  AA 372
            AA
Sbjct: 233  AA 234


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