BLASTX nr result
ID: Coptis24_contig00018092
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00018092
(2023 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera] 815 0.0
emb|CBI16013.3| unnamed protein product [Vitis vinifera] 815 0.0
ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223... 791 0.0
dbj|BAD28046.1| putative Helicase SKI2W [Oryza sativa Japonica G... 759 0.0
gb|EEE56349.1| hypothetical protein OsJ_05464 [Oryza sativa Japo... 759 0.0
>ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]
Length = 1379
Score = 815 bits (2104), Expect = 0.0
Identities = 413/549 (75%), Positives = 467/549 (85%)
Frame = -3
Query: 2021 RDEIPEERDLKHVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHXXXXX 1842
RDEIP+ERDLKHVIVGSATRL SQFRLTYIMILHLLRVEELKVEDMLKRSFAEFH
Sbjct: 831 RDEIPDERDLKHVIVGSATRLASQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKL 890
Query: 1841 XXXXXXXXXXXXXPMTVIECIKGEPAIEEYFEMLTEADRHREFVLEKIIQSSVSQQFLSP 1662
P IECIKGEP IEEY++M TEA++H +LE ++QSS +QQFL+
Sbjct: 891 PEKQQLLMRKLAQPTKTIECIKGEPTIEEYYDMYTEAEQHSNQILETVMQSSAAQQFLTL 950
Query: 1661 GRVVIVKSQSAEDHLLGVVLKIPSASFKQYIILVLRPDLPSTFQNSSPTEIPQEKGCGNE 1482
GRVV+VKSQS +DHL+GVV+K PSAS KQYI+LVL+P LPST Q S + Q+K G
Sbjct: 951 GRVVVVKSQSVQDHLIGVVVKAPSASSKQYIVLVLKPHLPSTLQTPSESGNLQDKKSGAF 1010
Query: 1481 QQGYFITPKSKRGLDDDYFSSVTSRKGSGAVNIKLPHHGSAAGMSFEVIGIEPVEFLSIC 1302
+G+FI PK+KR L+DDY++S TSRK SG +NIKLP+HG+AAG+S+EV GI+ EFL IC
Sbjct: 1011 PEGHFILPKAKRALEDDYYTSTTSRKASGTINIKLPYHGAAAGVSYEVRGIDNKEFLCIC 1070
Query: 1301 KCKIKIDQGRLLEDGSNAAYSKTVQQLLSQKSGGNKYPPALDPISDLKLKDILLVEAYNK 1122
KIKID LLED +NAAYSKTVQQLL KS G+KYPPALDP+ DLKLKD+ LVE Y K
Sbjct: 1071 IHKIKIDPVGLLEDANNAAYSKTVQQLLELKSKGHKYPPALDPLKDLKLKDMTLVETYYK 1130
Query: 1121 WNSILQKMAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEALQQMPDFQGRIDV 942
WNS+LQKMA+NKCH C KL+EH L KE+ +H++EV ALRFQMSDEALQQMPDFQGRIDV
Sbjct: 1131 WNSLLQKMADNKCHECVKLEEHIKLAKELKRHKEEVNALRFQMSDEALQQMPDFQGRIDV 1190
Query: 941 LKEIGCIDSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEEAVALMSALVFQQK 762
L+EIGCID+DLVVQIKGRVACEMNSGEELI TECLF+NQL+DLEPEEAVALMSALVFQQK
Sbjct: 1191 LQEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVALMSALVFQQK 1250
Query: 761 NTSEPSLTPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLKFGLVEVVYEWAKG 582
NTSEPSLTPKL+ AK+RLY+TAI LG+LQ FK+QI+PE+YA DNLKFGLVEVVYEWAKG
Sbjct: 1251 NTSEPSLTPKLSQAKQRLYNTAIRLGELQAQFKLQISPEEYAQDNLKFGLVEVVYEWAKG 1310
Query: 581 TPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMETASNAIKRDIVF 402
TPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKME ASNAIKRDIVF
Sbjct: 1311 TPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMEAASNAIKRDIVF 1370
Query: 401 AASLYVTGV 375
AASLY+TG+
Sbjct: 1371 AASLYITGL 1379
>emb|CBI16013.3| unnamed protein product [Vitis vinifera]
Length = 1082
Score = 815 bits (2104), Expect = 0.0
Identities = 413/549 (75%), Positives = 467/549 (85%)
Frame = -3
Query: 2021 RDEIPEERDLKHVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHXXXXX 1842
RDEIP+ERDLKHVIVGSATRL SQFRLTYIMILHLLRVEELKVEDMLKRSFAEFH
Sbjct: 534 RDEIPDERDLKHVIVGSATRLASQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKL 593
Query: 1841 XXXXXXXXXXXXXPMTVIECIKGEPAIEEYFEMLTEADRHREFVLEKIIQSSVSQQFLSP 1662
P IECIKGEP IEEY++M TEA++H +LE ++QSS +QQFL+
Sbjct: 594 PEKQQLLMRKLAQPTKTIECIKGEPTIEEYYDMYTEAEQHSNQILETVMQSSAAQQFLTL 653
Query: 1661 GRVVIVKSQSAEDHLLGVVLKIPSASFKQYIILVLRPDLPSTFQNSSPTEIPQEKGCGNE 1482
GRVV+VKSQS +DHL+GVV+K PSAS KQYI+LVL+P LPST Q S + Q+K G
Sbjct: 654 GRVVVVKSQSVQDHLIGVVVKAPSASSKQYIVLVLKPHLPSTLQTPSESGNLQDKKSGAF 713
Query: 1481 QQGYFITPKSKRGLDDDYFSSVTSRKGSGAVNIKLPHHGSAAGMSFEVIGIEPVEFLSIC 1302
+G+FI PK+KR L+DDY++S TSRK SG +NIKLP+HG+AAG+S+EV GI+ EFL IC
Sbjct: 714 PEGHFILPKAKRALEDDYYTSTTSRKASGTINIKLPYHGAAAGVSYEVRGIDNKEFLCIC 773
Query: 1301 KCKIKIDQGRLLEDGSNAAYSKTVQQLLSQKSGGNKYPPALDPISDLKLKDILLVEAYNK 1122
KIKID LLED +NAAYSKTVQQLL KS G+KYPPALDP+ DLKLKD+ LVE Y K
Sbjct: 774 IHKIKIDPVGLLEDANNAAYSKTVQQLLELKSKGHKYPPALDPLKDLKLKDMTLVETYYK 833
Query: 1121 WNSILQKMAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEALQQMPDFQGRIDV 942
WNS+LQKMA+NKCH C KL+EH L KE+ +H++EV ALRFQMSDEALQQMPDFQGRIDV
Sbjct: 834 WNSLLQKMADNKCHECVKLEEHIKLAKELKRHKEEVNALRFQMSDEALQQMPDFQGRIDV 893
Query: 941 LKEIGCIDSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEEAVALMSALVFQQK 762
L+EIGCID+DLVVQIKGRVACEMNSGEELI TECLF+NQL+DLEPEEAVALMSALVFQQK
Sbjct: 894 LQEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVALMSALVFQQK 953
Query: 761 NTSEPSLTPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLKFGLVEVVYEWAKG 582
NTSEPSLTPKL+ AK+RLY+TAI LG+LQ FK+QI+PE+YA DNLKFGLVEVVYEWAKG
Sbjct: 954 NTSEPSLTPKLSQAKQRLYNTAIRLGELQAQFKLQISPEEYAQDNLKFGLVEVVYEWAKG 1013
Query: 581 TPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMETASNAIKRDIVF 402
TPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKME ASNAIKRDIVF
Sbjct: 1014 TPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMEAASNAIKRDIVF 1073
Query: 401 AASLYVTGV 375
AASLY+TG+
Sbjct: 1074 AASLYITGL 1082
>ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223540281|gb|EEF41852.1|
helicase, putative [Ricinus communis]
Length = 1335
Score = 791 bits (2043), Expect = 0.0
Identities = 405/549 (73%), Positives = 461/549 (83%)
Frame = -3
Query: 2021 RDEIPEERDLKHVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHXXXXX 1842
RDEIP+ERDLKHVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFH
Sbjct: 792 RDEIPDERDLKHVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHTQKKL 851
Query: 1841 XXXXXXXXXXXXXPMTVIECIKGEPAIEEYFEMLTEADRHREFVLEKIIQSSVSQQFLSP 1662
P IECIKGEP IEEY++M EA+ + + E ++QSS +QQFL+P
Sbjct: 852 PETQQVLMRKLAQPTKAIECIKGEPDIEEYYDMFLEAEEYSNQISEAVMQSSAAQQFLTP 911
Query: 1661 GRVVIVKSQSAEDHLLGVVLKIPSASFKQYIILVLRPDLPSTFQNSSPTEIPQEKGCGNE 1482
GRVV+VKSQS +DHLLGVV+K PS S KQYI+LVL+PDLPS+ Q S+ Q+K G+
Sbjct: 912 GRVVVVKSQSGQDHLLGVVVKGPSTSMKQYIVLVLKPDLPSSTQISNL----QDKKSGDI 967
Query: 1481 QQGYFITPKSKRGLDDDYFSSVTSRKGSGAVNIKLPHHGSAAGMSFEVIGIEPVEFLSIC 1302
+ Y + PKSKRG +++YF S SRKGSGAVNIKLP+ G+AAG+++EV G++ EFL IC
Sbjct: 968 PKAYLLMPKSKRG-EEEYFYSTASRKGSGAVNIKLPYQGTAAGVNYEVRGMDNTEFLCIC 1026
Query: 1301 KCKIKIDQGRLLEDGSNAAYSKTVQQLLSQKSGGNKYPPALDPISDLKLKDILLVEAYNK 1122
K+KIDQ LLED SN A+SKTVQQL KS GNKYPPALDP++DLK+KD+ LVEAY K
Sbjct: 1027 ARKLKIDQVGLLEDVSNTAFSKTVQQLSELKSDGNKYPPALDPLTDLKMKDVNLVEAYKK 1086
Query: 1121 WNSILQKMAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEALQQMPDFQGRIDV 942
W S+LQKMA NKCHGC KL+EH L KEI KH+DE+ LRFQMSDEALQQMPDFQGRIDV
Sbjct: 1087 WTSLLQKMARNKCHGCIKLEEHLNLAKEIKKHKDEIDKLRFQMSDEALQQMPDFQGRIDV 1146
Query: 941 LKEIGCIDSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEEAVALMSALVFQQK 762
LKEIGCID+DLVVQIKGRVACEMNSGEELI TECLF+NQL+DLEPEEAVA+MSA VFQQ+
Sbjct: 1147 LKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQR 1206
Query: 761 NTSEPSLTPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLKFGLVEVVYEWAKG 582
NTSEPSLTPKL+ AKKRLYDTAI LG+LQ K+QINPE+YA +NLKFGLVEVVYEWAKG
Sbjct: 1207 NTSEPSLTPKLSKAKKRLYDTAIRLGELQVKNKLQINPEEYAQENLKFGLVEVVYEWAKG 1266
Query: 581 TPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMETASNAIKRDIVF 402
TPFADICELTDVPEGLIVRTIVRLDETCREF+NAA+IMGNS+L+KKME ASNAIKRDIVF
Sbjct: 1267 TPFADICELTDVPEGLIVRTIVRLDETCREFKNAASIMGNSSLYKKMEAASNAIKRDIVF 1326
Query: 401 AASLYVTGV 375
AASLY+TGV
Sbjct: 1327 AASLYITGV 1335
>dbj|BAD28046.1| putative Helicase SKI2W [Oryza sativa Japonica Group]
Length = 1281
Score = 759 bits (1960), Expect = 0.0
Identities = 387/549 (70%), Positives = 447/549 (81%)
Frame = -3
Query: 2021 RDEIPEERDLKHVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHXXXXX 1842
RDEIPEE DLK++IVG TRLESQFRLTY MILHLLRVEELKVEDMLKRSFAEFH
Sbjct: 734 RDEIPEESDLKNLIVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHAQKNL 793
Query: 1841 XXXXXXXXXXXXXPMTVIECIKGEPAIEEYFEMLTEADRHREFVLEKIIQSSVSQQFLSP 1662
P IECIKGEPAIEEY+EM+ EA+ HRE + E I+Q SQQ L+P
Sbjct: 794 PEKEKLLLQMLRQPTKTIECIKGEPAIEEYYEMVLEAEAHRESITEAIMQLPASQQSLTP 853
Query: 1661 GRVVIVKSQSAEDHLLGVVLKIPSASFKQYIILVLRPDLPSTFQNSSPTEIPQEKGCGNE 1482
GR+V+VKSQS +DHLLGV++K PSA+ KQY++LVL D S+ + EK G+
Sbjct: 854 GRLVVVKSQSDDDHLLGVIVKTPSAALKQYVVLVLTGDCTSSALAPDSSN-QNEKEAGDF 912
Query: 1481 QQGYFITPKSKRGLDDDYFSSVTSRKGSGAVNIKLPHHGSAAGMSFEVIGIEPVEFLSIC 1302
+QGYF+ PK KR ++D+YFSSV++RKGSG +NIKLP+ G A+GM FEV IE E ++IC
Sbjct: 913 KQGYFVIPKGKRSMEDEYFSSVSTRKGSGVINIKLPYKGDASGMGFEVRAIENKEIMNIC 972
Query: 1301 KCKIKIDQGRLLEDGSNAAYSKTVQQLLSQKSGGNKYPPALDPISDLKLKDILLVEAYNK 1122
KIKIDQ RLLED S YSKTVQ L+ ++ GNKYP ALD I DLK+KD+LLVE Y
Sbjct: 973 ASKIKIDQVRLLEDPSKTVYSKTVQMLIKEQPDGNKYPAALDAIKDLKMKDMLLVENYYA 1032
Query: 1121 WNSILQKMAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEALQQMPDFQGRIDV 942
+ +LQKM+ENKCHGC KLKEH L+KE ++D++ L+++MSDEALQQMP+FQGRIDV
Sbjct: 1033 YQRLLQKMSENKCHGCIKLKEHIALMKEQKVYKDQLNDLKYEMSDEALQQMPEFQGRIDV 1092
Query: 941 LKEIGCIDSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEEAVALMSALVFQQK 762
LKEI IDSDLVVQ+KGRVACEMNSGEELISTECLF+NQL+DLEPEEAVA+MSALVFQQ+
Sbjct: 1093 LKEIHYIDSDLVVQLKGRVACEMNSGEELISTECLFENQLDDLEPEEAVAIMSALVFQQR 1152
Query: 761 NTSEPSLTPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLKFGLVEVVYEWAKG 582
NTSEPSLTPKLA A+KR+YDTAI LGKLQ FKV ++PE+YA DNLKFGLVEVVYEWAKG
Sbjct: 1153 NTSEPSLTPKLADARKRIYDTAIRLGKLQREFKVPVDPEEYARDNLKFGLVEVVYEWAKG 1212
Query: 581 TPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMETASNAIKRDIVF 402
TPFADICELTDV EGLIVRTIVRLDETCREFRNAA+IMGNSALHKKMETASNAIKRDIVF
Sbjct: 1213 TPFADICELTDVSEGLIVRTIVRLDETCREFRNAASIMGNSALHKKMETASNAIKRDIVF 1272
Query: 401 AASLYVTGV 375
AASLYVTG+
Sbjct: 1273 AASLYVTGI 1281
>gb|EEE56349.1| hypothetical protein OsJ_05464 [Oryza sativa Japonica Group]
Length = 1452
Score = 759 bits (1960), Expect = 0.0
Identities = 387/549 (70%), Positives = 447/549 (81%)
Frame = -3
Query: 2021 RDEIPEERDLKHVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHXXXXX 1842
RDEIPEE DLK++IVG TRLESQFRLTY MILHLLRVEELKVEDMLKRSFAEFH
Sbjct: 905 RDEIPEESDLKNLIVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHAQKNL 964
Query: 1841 XXXXXXXXXXXXXPMTVIECIKGEPAIEEYFEMLTEADRHREFVLEKIIQSSVSQQFLSP 1662
P IECIKGEPAIEEY+EM+ EA+ HRE + E I+Q SQQ L+P
Sbjct: 965 PEKEKLLLQMLRQPTKTIECIKGEPAIEEYYEMVLEAEAHRESITEAIMQLPASQQSLTP 1024
Query: 1661 GRVVIVKSQSAEDHLLGVVLKIPSASFKQYIILVLRPDLPSTFQNSSPTEIPQEKGCGNE 1482
GR+V+VKSQS +DHLLGV++K PSA+ KQY++LVL D S+ + EK G+
Sbjct: 1025 GRLVVVKSQSDDDHLLGVIVKTPSAALKQYVVLVLTGDCTSSALAPDSSN-QNEKEAGDF 1083
Query: 1481 QQGYFITPKSKRGLDDDYFSSVTSRKGSGAVNIKLPHHGSAAGMSFEVIGIEPVEFLSIC 1302
+QGYF+ PK KR ++D+YFSSV++RKGSG +NIKLP+ G A+GM FEV IE E ++IC
Sbjct: 1084 KQGYFVIPKGKRSMEDEYFSSVSTRKGSGVINIKLPYKGDASGMGFEVRAIENKEIMNIC 1143
Query: 1301 KCKIKIDQGRLLEDGSNAAYSKTVQQLLSQKSGGNKYPPALDPISDLKLKDILLVEAYNK 1122
KIKIDQ RLLED S YSKTVQ L+ ++ GNKYP ALD I DLK+KD+LLVE Y
Sbjct: 1144 ASKIKIDQVRLLEDPSKTVYSKTVQMLIKEQPDGNKYPAALDAIKDLKMKDMLLVENYYA 1203
Query: 1121 WNSILQKMAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEALQQMPDFQGRIDV 942
+ +LQKM+ENKCHGC KLKEH L+KE ++D++ L+++MSDEALQQMP+FQGRIDV
Sbjct: 1204 YQRLLQKMSENKCHGCIKLKEHIALMKEQKVYKDQLNDLKYEMSDEALQQMPEFQGRIDV 1263
Query: 941 LKEIGCIDSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEEAVALMSALVFQQK 762
LKEI IDSDLVVQ+KGRVACEMNSGEELISTECLF+NQL+DLEPEEAVA+MSALVFQQ+
Sbjct: 1264 LKEIHYIDSDLVVQLKGRVACEMNSGEELISTECLFENQLDDLEPEEAVAIMSALVFQQR 1323
Query: 761 NTSEPSLTPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLKFGLVEVVYEWAKG 582
NTSEPSLTPKLA A+KR+YDTAI LGKLQ FKV ++PE+YA DNLKFGLVEVVYEWAKG
Sbjct: 1324 NTSEPSLTPKLADARKRIYDTAIRLGKLQREFKVPVDPEEYARDNLKFGLVEVVYEWAKG 1383
Query: 581 TPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMETASNAIKRDIVF 402
TPFADICELTDV EGLIVRTIVRLDETCREFRNAA+IMGNSALHKKMETASNAIKRDIVF
Sbjct: 1384 TPFADICELTDVSEGLIVRTIVRLDETCREFRNAASIMGNSALHKKMETASNAIKRDIVF 1443
Query: 401 AASLYVTGV 375
AASLYVTG+
Sbjct: 1444 AASLYVTGI 1452