BLASTX nr result

ID: Coptis24_contig00018088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018088
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25172.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_002264313.1| PREDICTED: ABC transporter C family member 1...    57   1e-06

>emb|CBI25172.3| unnamed protein product [Vitis vinifera]
          Length = 1205

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = +2

Query: 17  SAPYVSEFLAESVQHMAVVARDISSSWSTSIK-EQSSVLHHITLDLPKGFLITVIGEVGA 193
           S+P  S      ++ MAV   D S +WS+S + E+  VLHH+TL LP+G L+ +IGEVG+
Sbjct: 316 SSPSFSGQFNFKLEDMAVAMYDASCAWSSSEEVEKDLVLHHVTLGLPRGSLVAIIGEVGS 375

Query: 194 GKS 202
           GKS
Sbjct: 376 GKS 378


>ref|XP_002264313.1| PREDICTED: ABC transporter C family member 13-like [Vitis vinifera]
          Length = 1305

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = +2

Query: 17  SAPYVSEFLAESVQHMAVVARDISSSWSTSIK-EQSSVLHHITLDLPKGFLITVIGEVGA 193
           S+P  S      ++ MAV   D S +WS+S + E+  VLHH+TL LP+G L+ +IGEVG+
Sbjct: 434 SSPSFSGQFNFKLEDMAVAMYDASCAWSSSEEVEKDLVLHHVTLGLPRGSLVAIIGEVGS 493

Query: 194 GKS 202
           GKS
Sbjct: 494 GKS 496


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