BLASTX nr result

ID: Coptis24_contig00018087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018087
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25172.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002264313.1| PREDICTED: ABC transporter C family member 1...   160   1e-37
ref|XP_002512723.1| multidrug resistance-associated protein, put...   157   1e-36
ref|XP_002304728.1| multidrug resistance protein ABC transporter...   156   1e-36
emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catha...   155   2e-36

>emb|CBI25172.3| unnamed protein product [Vitis vinifera]
          Length = 1205

 Score =  160 bits (404), Expect = 1e-37
 Identities = 76/103 (73%), Positives = 92/103 (89%)
 Frame = -2

Query: 310 VPWILSGSIRDNILFGKNYDAKRYTEVVHACELDFDISLMVGGDLAYIGEKGLNLSGGQK 131
           VPWILSG+IR+NILFGK YD  RY++V+ AC LD DISLMVGGD+AYIG+KG+NLSGGQ+
Sbjct: 407 VPWILSGTIRENILFGKAYDPTRYSDVLEACALDIDISLMVGGDMAYIGDKGVNLSGGQR 466

Query: 130 ARLALSRAVYSGANLFLLDDVLSAVDAQVASMILYKAILGPLM 2
           ARLAL+RA+Y G+++F+LDDVLSAVD QVA  IL+ AILGPLM
Sbjct: 467 ARLALARAIYHGSDIFMLDDVLSAVDTQVARCILHNAILGPLM 509


>ref|XP_002264313.1| PREDICTED: ABC transporter C family member 13-like [Vitis vinifera]
          Length = 1305

 Score =  160 bits (404), Expect = 1e-37
 Identities = 76/103 (73%), Positives = 92/103 (89%)
 Frame = -2

Query: 310 VPWILSGSIRDNILFGKNYDAKRYTEVVHACELDFDISLMVGGDLAYIGEKGLNLSGGQK 131
           VPWILSG+IR+NILFGK YD  RY++V+ AC LD DISLMVGGD+AYIG+KG+NLSGGQ+
Sbjct: 525 VPWILSGTIRENILFGKAYDPTRYSDVLEACALDIDISLMVGGDMAYIGDKGVNLSGGQR 584

Query: 130 ARLALSRAVYSGANLFLLDDVLSAVDAQVASMILYKAILGPLM 2
           ARLAL+RA+Y G+++F+LDDVLSAVD QVA  IL+ AILGPLM
Sbjct: 585 ARLALARAIYHGSDIFMLDDVLSAVDTQVARCILHNAILGPLM 627


>ref|XP_002512723.1| multidrug resistance-associated protein, putative [Ricinus
           communis] gi|223547734|gb|EEF49226.1| multidrug
           resistance-associated protein, putative [Ricinus
           communis]
          Length = 1395

 Score =  157 bits (396), Expect = 1e-36
 Identities = 71/103 (68%), Positives = 92/103 (89%)
 Frame = -2

Query: 310 VPWILSGSIRDNILFGKNYDAKRYTEVVHACELDFDISLMVGGDLAYIGEKGLNLSGGQK 131
           VPWILSG++R+NILFGKNYD++RY + + AC LD DIS+M GGD+AYIGEKG+NLSGGQ+
Sbjct: 615 VPWILSGTVRENILFGKNYDSERYLDTIKACALDVDISMMAGGDMAYIGEKGVNLSGGQR 674

Query: 130 ARLALSRAVYSGANLFLLDDVLSAVDAQVASMILYKAILGPLM 2
           AR+AL+RA+Y G+++++LDDVLSAVDA+VA  IL  AILGPL+
Sbjct: 675 ARIALARAIYQGSDVYMLDDVLSAVDAEVARCILQNAILGPLL 717


>ref|XP_002304728.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222842160|gb|EEE79707.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1426

 Score =  156 bits (395), Expect = 1e-36
 Identities = 72/103 (69%), Positives = 89/103 (86%)
 Frame = -2

Query: 310 VPWILSGSIRDNILFGKNYDAKRYTEVVHACELDFDISLMVGGDLAYIGEKGLNLSGGQK 131
           VPWI+SG+IRDNILFGKNYD++RY++ +  C LD DISLM GGD+A+IG KG+NLSGGQ+
Sbjct: 561 VPWIMSGTIRDNILFGKNYDSRRYSDTIRVCALDVDISLMAGGDMAHIGSKGINLSGGQR 620

Query: 130 ARLALSRAVYSGANLFLLDDVLSAVDAQVASMILYKAILGPLM 2
           ARLAL+RA+Y G + ++LDDVLSAVDAQVA  IL+ AILGP M
Sbjct: 621 ARLALARAIYQGLDTYMLDDVLSAVDAQVARWILHNAILGPFM 663


>emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catharanthus roseus]
          Length = 1457

 Score =  155 bits (393), Expect = 2e-36
 Identities = 75/103 (72%), Positives = 91/103 (88%)
 Frame = -2

Query: 310 VPWILSGSIRDNILFGKNYDAKRYTEVVHACELDFDISLMVGGDLAYIGEKGLNLSGGQK 131
           VPWILSG+IRDNILFG  ++ +RY++V+ AC LDFDISLM+GGD+A IGEKGLNLSGGQ+
Sbjct: 680 VPWILSGTIRDNILFGTEFNPRRYSDVLKACALDFDISLMMGGDMACIGEKGLNLSGGQR 739

Query: 130 ARLALSRAVYSGANLFLLDDVLSAVDAQVASMILYKAILGPLM 2
           ARLAL+RA+Y G+ +++LDDVLSAVDA VAS IL  AILGPLM
Sbjct: 740 ARLALARAIYCGSEIYMLDDVLSAVDAHVASSILNNAILGPLM 782