BLASTX nr result

ID: Coptis24_contig00018084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018084
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526386.1| conserved hypothetical protein [Ricinus comm...   147   4e-33
ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel...   145   8e-33
emb|CBI15784.3| unnamed protein product [Vitis vinifera]              139   8e-31
ref|XP_003562440.1| PREDICTED: Werner syndrome ATP-dependent hel...   134   3e-29
gb|EEC82697.1| hypothetical protein OsI_27361 [Oryza sativa Indi...   133   4e-29

>ref|XP_002526386.1| conserved hypothetical protein [Ricinus communis]
            gi|223534248|gb|EEF35962.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 795

 Score =  147 bits (370), Expect = 4e-33
 Identities = 93/228 (40%), Positives = 122/228 (53%), Gaps = 3/228 (1%)
 Frame = +1

Query: 4    EYIFEAVQEGYEINWNRFCEEIGMTHEIYLNIQGAISKVGSRERLKPIKEELPEQVSYTQ 183
            EY+ +A QEG E +W RFC EIG+T EI+ +IQGAI KVGSRE+LKPIK ELPE VSY  
Sbjct: 596  EYLLDAAQEGLEFDWIRFCSEIGLTGEIFSDIQGAIIKVGSREKLKPIKNELPEDVSYAH 655

Query: 184  IKAVLKMQDLGLSAELFPSPECTKMGEVPNDKSEPSLGVDPTGPSERNDDCDEVESSLNE 363
            IK  L MQ  G+S E                      G+ P+  S   DD  + +   N 
Sbjct: 656  IKTFLAMQTSGMSLE----------------------GMQPSHLSPSKDDPVQNKVPANS 693

Query: 364  KEDTSSSPVTEPASERLVSTKQPRPVEDE--TSSRKCRRISGIEEGTVALQATEEGVVEL 537
             E  S + VTE          +P P+ DE   S  K ++    +  + AL+ATE  +++L
Sbjct: 694  VEIASLTTVTER------KELKPDPIHDEDLCSPEKRQKTIITDGSSTALEATETSILDL 747

Query: 538  LNNRD-GVPLSDIVDHFKGSNXXXXXXXXXXXXXXFIVYKKNDLYRVL 678
            L N D GV LSDI+ HFKGS               F+++KKN+LYR+L
Sbjct: 748  LKNYDEGVSLSDILKHFKGSREDSVIDLLSSLEADFMIFKKNNLYRLL 795


>ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis
            vinifera]
          Length = 913

 Score =  145 bits (367), Expect = 8e-33
 Identities = 90/235 (38%), Positives = 131/235 (55%), Gaps = 10/235 (4%)
 Frame = +1

Query: 4    EYIFEAVQEGYEINWNRFCEEIGMTHEIYLNIQGAISKVGSRERLKPIKEELPEQVSYTQ 183
            EY+  A QEG+ I+W R C+E+G+T E++ +I+ AI+KVGSR++LKP+K E PE +SY  
Sbjct: 685  EYLLGAAQEGFAIDWTRLCDEVGLTREMFSDIEAAITKVGSRDKLKPVKIESPEYISYAH 744

Query: 184  IKAVLKMQDLGLSAELFP--SPECTKMGEVPNDKSEPSLGVDP----TGPSERNDDCDE- 342
            IK  L +QD G+S E+ P  +       E+P+  SE S+         GP E     D  
Sbjct: 745  IKVCLTLQDCGMSKEVIPPGNHNTLTADELPSKASEASMDTMHKCLIRGPCEVETSVDNI 804

Query: 343  VESSLNEKEDTSSSPVTEPASERLVSTKQPRPVEDET-SSRKCRRISGIEEGTVALQ-AT 516
            + S   E E T+S P T            P  V DE  S RK ++I   EE ++ +Q AT
Sbjct: 805  IASCCLENEVTTSIPFTVDLD------MHPPGVHDEIFSLRKRQKIDEPEEESLIMQEAT 858

Query: 517  EEGVVELLNN-RDGVPLSDIVDHFKGSNXXXXXXXXXXXXXXFIVYKKNDLYRVL 678
            E  +++LL N  DGVPLSD++ HF GS               F+++KKN++YR++
Sbjct: 859  ESSILDLLRNYDDGVPLSDVLKHFNGSREEYVVDLLSNLEGEFMIFKKNNMYRLM 913


>emb|CBI15784.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score =  139 bits (350), Expect = 8e-31
 Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 5/230 (2%)
 Frame = +1

Query: 4    EYIFEAVQEGYEINWNRFCEEIGMTHEIYLNIQGAISKVGSRERLKPIKEELPEQVSYTQ 183
            EY+  A QEG+ I+W R C+E+G+T E++ +I+ AI+KVGSR++LKP+K E PE +SY  
Sbjct: 760  EYLLGAAQEGFAIDWTRLCDEVGLTREMFSDIEAAITKVGSRDKLKPVKIESPEYISYAH 819

Query: 184  IKAVLKMQDLGLSAELFP--SPECTKMGEVPNDKSEPSLGVDPTGPSERNDDCDEVESSL 357
            IK  L +QD G+S E+ P  +       E+P+  SE S+              D +   L
Sbjct: 820  IKVCLTLQDCGMSKEVIPPGNHNTLTADELPSKASEASM--------------DTMHKCL 865

Query: 358  NEKEDTSSSPVTEPASERLVSTKQPRPVEDET-SSRKCRRISGIEEGTVALQ-ATEEGVV 531
                 T+S P T            P  V DE  S RK ++I   EE ++ +Q ATE  ++
Sbjct: 866  IRGPFTTSIPFTVDLD------MHPPGVHDEIFSLRKRQKIDEPEEESLIMQEATESSIL 919

Query: 532  ELLNN-RDGVPLSDIVDHFKGSNXXXXXXXXXXXXXXFIVYKKNDLYRVL 678
            +LL N  DGVPLSD++ HF GS               F+++KKN++YR++
Sbjct: 920  DLLRNYDDGVPLSDVLKHFNGSREEYVVDLLSNLEGEFMIFKKNNMYRLM 969


>ref|XP_003562440.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Brachypodium
            distachyon]
          Length = 894

 Score =  134 bits (336), Expect = 3e-29
 Identities = 86/230 (37%), Positives = 119/230 (51%), Gaps = 6/230 (2%)
 Frame = +1

Query: 7    YIFEAVQEGYEINWNRFCEEIGMTHEIYLNIQGAISKVGSRERLKPIKEELPEQVSYTQI 186
            YI +A ++G E+NWNRFCEE G+THEI   I+ AI+KVGSR++LKPIKEELPE V+Y  I
Sbjct: 681  YILDAARDGCEMNWNRFCEETGLTHEIASQIRLAIAKVGSRDKLKPIKEELPENVTYEMI 740

Query: 187  KAVLKMQDLGLSAELFPSPECTKMGEVPNDKSEPSLGVDPTGPSERNDDCDEVESSLNEK 366
            K  L + D+G S + F        G V  DK   S    P   S  +    E   + N+ 
Sbjct: 741  KIFLAIDDVGASEKTF--------GNVSADKVPASTTESPKSSSHGS----EAVKNGNQG 788

Query: 367  EDTSSSPV--TEPASERLVSTKQPRPVEDETSSRKCRRISGIE----EGTVALQATEEGV 528
            +D   +    + P+++R     Q        S+   +++  I+    E   A+ ATEE +
Sbjct: 789  DDVIMAGAFDSSPSTKR----SQAHGTLASVSNEPVKKLQKIDEQGMESFAAIAATEEAI 844

Query: 529  VELLNNRDGVPLSDIVDHFKGSNXXXXXXXXXXXXXXFIVYKKNDLYRVL 678
            VEL  + +GV L D V HF GS               F+VY+K D Y VL
Sbjct: 845  VELAASCNGVSLEDAVKHFSGSKRESVIEMLENLECNFVVYRKKDCYMVL 894


>gb|EEC82697.1| hypothetical protein OsI_27361 [Oryza sativa Indica Group]
          Length = 905

 Score =  133 bits (335), Expect = 4e-29
 Identities = 85/231 (36%), Positives = 121/231 (52%), Gaps = 7/231 (3%)
 Frame = +1

Query: 7    YIFEAVQEGYEINWNRFCEEIGMTHEIYLNIQGAISKVGSRERLKPIKEELPEQVSYTQI 186
            YI +A ++G E++W+RFCEE+G+THEI   I+ AI+K+GS E+LKPIK+ELPE V+Y  I
Sbjct: 704  YILDAARDGCEMDWSRFCEEVGLTHEIASQIRLAITKLGSHEKLKPIKDELPENVTYEMI 763

Query: 187  KAVLKMQDLGLSAELFPSPECTKMGEVPND----KSEPSLGVDPTGPSERNDDCDEVESS 354
            +  L ++ LGLS ++F        G VP D    K+  +      G     D CD   S 
Sbjct: 764  QTFLAIEGLGLSDQVF--------GTVPTDGIQSKTSEAPKTTSNGSEVGADVCD--ASP 813

Query: 355  LNEKEDTSSSPV--TEPASERLVSTKQPRPVEDETSSRKCRRISGI-EEGTVALQATEEG 525
            L ++  T  S +   EPAS                   K ++I G     T A+ ATE+ 
Sbjct: 814  LTKRGQTDGSLICGDEPAS-------------------KLQKIDGQGVNSTAAIGATEDA 854

Query: 526  VVELLNNRDGVPLSDIVDHFKGSNXXXXXXXXXXXXXXFIVYKKNDLYRVL 678
            ++EL+  R+GV L D+V HF GS               F+VYKKN  Y ++
Sbjct: 855  ILELVEGRNGVSLEDVVKHFNGSKRECVVEMLDNLEGNFLVYKKNGCYMIM 905


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