BLASTX nr result
ID: Coptis24_contig00018079
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00018079
(1827 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277883.1| PREDICTED: U-box domain-containing protein 3... 576 e-162
ref|XP_003632427.1| PREDICTED: U-box domain-containing protein 3... 565 e-158
ref|XP_002306856.1| predicted protein [Populus trichocarpa] gi|2... 543 e-152
ref|XP_002302042.1| predicted protein [Populus trichocarpa] gi|2... 537 e-150
ref|XP_004148950.1| PREDICTED: U-box domain-containing protein 3... 534 e-149
>ref|XP_002277883.1| PREDICTED: U-box domain-containing protein 3-like isoform 1 [Vitis
vinifera]
Length = 764
Score = 576 bits (1485), Expect = e-162
Identities = 327/515 (63%), Positives = 369/515 (71%), Gaps = 7/515 (1%)
Frame = +1
Query: 1 ICPKTRQDLAHANLITNYTVKDLIANWCEDNNIRRCDTAHGNNASPLPISAN-VPSQDFT 177
ICPKTRQ LAHANLI NYTVK LI NWCE+NNI T+ N +P+P + V +QD
Sbjct: 276 ICPKTRQTLAHANLIPNYTVKALIENWCEENNITLSGTSEHTNITPVPSPLDHVSAQDVI 335
Query: 178 RAESFRCCFYSNNSTPRSSLEAGHRSQKKKVGDSSKCIEDNSKVIP-----KCDQSSPGQ 342
+SFRC +S+N T RSSLE G+ +K KV S++ + S V K ++ SP Q
Sbjct: 336 GMDSFRCSIHSSNCTSRSSLEVGNGIEKLKVDVSTRFGGEESNVCKSREPEKLERQSPEQ 395
Query: 343 SYIHSRTXXXXXXXXXXXYLPPSFATNLHEASDLSSKHGHTSEFFGEVTSNCSVSSPSKE 522
SYIHSRT LP T E S +S+K + + GE+TS+
Sbjct: 396 SYIHSRTESTSSAVSSIDSLP----TASTELSRISNKQENGTGLSGEITSD--------- 442
Query: 523 AGFSPWLSGRKYHSSKTVTAVADNGS-NHQRSFSLPFSDSGFDDLTTSSHVEKLVEDLKV 699
SKT + NG R SLPFSD FDDLTTSSHVEKLVEDLK
Sbjct: 443 --------------SKTKVEMVSNGKCGPPRILSLPFSDPKFDDLTTSSHVEKLVEDLKS 488
Query: 700 QCSDTQTTAAAELRLLAKHNMDNRLIIAHCGAIPPLISLLYSVKKLTQEHAVTTLLNLSI 879
Q ++ QT AA+ELRLLAKHNM+NR+II CGAI PL+ LLYS K TQE+AVT LLNLSI
Sbjct: 489 QSNELQTVAASELRLLAKHNMENRIIIGRCGAIAPLVLLLYSEVKQTQENAVTALLNLSI 548
Query: 880 NENNKNMIAEAGAIEPLIHVLKSGNAGAKENGAATLFSLSVLEEYKIKIGRSAAVKALVD 1059
N+ NK +IAEAGAIE LIHVLKSGNAGAKEN AATLFSLSVLEEYK KIG S AVKALVD
Sbjct: 549 NDANKVIIAEAGAIESLIHVLKSGNAGAKENSAATLFSLSVLEEYKAKIGCSGAVKALVD 608
Query: 1060 LLESGTLRGKKDAATALFNLSIFHENKVRIVQAGAVKHLIELMDPDTGMIDKCVALLANL 1239
LL SGTLRGKKDAATALFNLSI HENK RI+QAGAVK+L++LM+P TGM+DK VALLANL
Sbjct: 609 LLGSGTLRGKKDAATALFNLSICHENKPRIIQAGAVKYLVQLMEPATGMVDKAVALLANL 668
Query: 1240 STIPEGRSAITREGGIPLLVEVLETGSQRGKENAASILLQLCFNSQKFCTLVLQEGAVPP 1419
S I EGR AI REGGIPLLVE++ETGS RGKENAASILLQLC NS KFCTLVLQEGA+PP
Sbjct: 669 SIISEGRFAIVREGGIPLLVELVETGSVRGKENAASILLQLCINSPKFCTLVLQEGAIPP 728
Query: 1420 LVALSQCGTPRAKEKAHQILSHFRNQREGAVGKAK 1524
LVALSQ GTPRAKEKA Q+LSHFRNQREGA K K
Sbjct: 729 LVALSQSGTPRAKEKAQQLLSHFRNQREGAAAKGK 763
>ref|XP_003632427.1| PREDICTED: U-box domain-containing protein 3-like isoform 2 [Vitis
vinifera]
Length = 757
Score = 565 bits (1456), Expect = e-158
Identities = 323/515 (62%), Positives = 363/515 (70%), Gaps = 7/515 (1%)
Frame = +1
Query: 1 ICPKTRQDLAHANLITNYTVKDLIANWCEDNNIRRCDTAHGNNASPLPISAN-VPSQDFT 177
ICPKTRQ LAHANLI NYTVK LI NWCE+NNI T+ N +P+P + V +QD
Sbjct: 276 ICPKTRQTLAHANLIPNYTVKALIENWCEENNITLSGTSEHTNITPVPSPLDHVSAQDVI 335
Query: 178 RAESFRCCFYSNNSTPRSSLEAGHRSQKKKVGDSSKCIEDNSKVIP-----KCDQSSPGQ 342
+SFRC +S+N T RSSLE G+ +K KV S++ + S V K ++ SP Q
Sbjct: 336 GMDSFRCSIHSSNCTSRSSLEVGNGIEKLKVDVSTRFGGEESNVCKSREPEKLERQSPEQ 395
Query: 343 SYIHSRTXXXXXXXXXXXYLPPSFATNLHEASDLSSKHGHTSEFFGEVTSNCSVSSPSKE 522
SYIHSRT LP T E S +S+K + +
Sbjct: 396 SYIHSRTESTSSAVSSIDSLP----TASTELSRISNKQENGTGL---------------- 435
Query: 523 AGFSPWLSGRKYHSSKTVTAVADNGS-NHQRSFSLPFSDSGFDDLTTSSHVEKLVEDLKV 699
SKT + NG R SLPFSD FDDLTTSSHVEKLVEDLK
Sbjct: 436 --------------SKTKVEMVSNGKCGPPRILSLPFSDPKFDDLTTSSHVEKLVEDLKS 481
Query: 700 QCSDTQTTAAAELRLLAKHNMDNRLIIAHCGAIPPLISLLYSVKKLTQEHAVTTLLNLSI 879
Q ++ QT AA+ELRLLAKHNM+NR+II CGAI PL+ LLYS K TQE+AVT LLNLSI
Sbjct: 482 QSNELQTVAASELRLLAKHNMENRIIIGRCGAIAPLVLLLYSEVKQTQENAVTALLNLSI 541
Query: 880 NENNKNMIAEAGAIEPLIHVLKSGNAGAKENGAATLFSLSVLEEYKIKIGRSAAVKALVD 1059
N+ NK +IAEAGAIE LIHVLKSGNAGAKEN AATLFSLSVLEEYK KIG S AVKALVD
Sbjct: 542 NDANKVIIAEAGAIESLIHVLKSGNAGAKENSAATLFSLSVLEEYKAKIGCSGAVKALVD 601
Query: 1060 LLESGTLRGKKDAATALFNLSIFHENKVRIVQAGAVKHLIELMDPDTGMIDKCVALLANL 1239
LL SGTLRGKKDAATALFNLSI HENK RI+QAGAVK+L++LM+P TGM+DK VALLANL
Sbjct: 602 LLGSGTLRGKKDAATALFNLSICHENKPRIIQAGAVKYLVQLMEPATGMVDKAVALLANL 661
Query: 1240 STIPEGRSAITREGGIPLLVEVLETGSQRGKENAASILLQLCFNSQKFCTLVLQEGAVPP 1419
S I EGR AI REGGIPLLVE++ETGS RGKENAASILLQLC NS KFCTLVLQEGA+PP
Sbjct: 662 SIISEGRFAIVREGGIPLLVELVETGSVRGKENAASILLQLCINSPKFCTLVLQEGAIPP 721
Query: 1420 LVALSQCGTPRAKEKAHQILSHFRNQREGAVGKAK 1524
LVALSQ GTPRAKEKA Q+LSHFRNQREGA K K
Sbjct: 722 LVALSQSGTPRAKEKAQQLLSHFRNQREGAAAKGK 756
>ref|XP_002306856.1| predicted protein [Populus trichocarpa] gi|222856305|gb|EEE93852.1|
predicted protein [Populus trichocarpa]
Length = 748
Score = 543 bits (1398), Expect = e-152
Identities = 311/517 (60%), Positives = 364/517 (70%), Gaps = 9/517 (1%)
Frame = +1
Query: 1 ICPKTRQDLAHANLITNYTVKDLIANWCEDNNIRRCDTAHGNNASPLPISANVPS-QDFT 177
ICP+TRQ L+H NLI NYTVK +IANWCE+NN+R S +VPS D
Sbjct: 276 ICPRTRQTLSHTNLIPNYTVKAMIANWCEENNVR-------------VSSDSVPSHHDLL 322
Query: 178 RAESF--RCCFYSNNSTPRSSLEAGHRSQKKKVGDSSKCI-----EDNSKVIPKCDQSSP 336
+SF RC +S+NST RSS+E G+ +K+K+G SS+ ++ I + S
Sbjct: 323 HLDSFRYRCSLHSSNSTSRSSIEVGNGFEKQKIGVSSRLSGEEFNRNHVMGIESFECPSH 382
Query: 337 GQSYIHSRTXXXXXXXXXXXYLPPSFATNLHEASDLSSKHGHTSEFFGEVTSNCSVSSPS 516
SYIHSR+ Y+PP+ E L + H + ++
Sbjct: 383 ELSYIHSRSESTSSAISSIEYVPPA----SDEMLKLLTMHDNVNDL-------------- 424
Query: 517 KEAGFSPWLSGRKYHSSKTVTAVADNGS-NHQRSFSLPFSDSGFDDLTTSSHVEKLVEDL 693
++HS K +A NGS N+ R+ SL FSDSG DL T+S V+KLVE L
Sbjct: 425 ------------QFHSPK--YDMASNGSHNYSRTNSLQFSDSGSHDLCTTSQVKKLVEGL 470
Query: 694 KVQCSDTQTTAAAELRLLAKHNMDNRLIIAHCGAIPPLISLLYSVKKLTQEHAVTTLLNL 873
K Q ++ +T AA ELRLLAKHN++NR+II H GAI PL+SLLYS K+TQEHAVT +LNL
Sbjct: 471 KSQSNEIKTKAAEELRLLAKHNVENRIIIGHSGAIRPLLSLLYSEVKITQEHAVTAVLNL 530
Query: 874 SINENNKNMIAEAGAIEPLIHVLKSGNAGAKENGAATLFSLSVLEEYKIKIGRSAAVKAL 1053
SINE NK MIAEAGAIEPLIHVL+SGN GAKEN AA LFSLSVLEEYK KIGRS AVKAL
Sbjct: 531 SINEENKAMIAEAGAIEPLIHVLRSGNDGAKENSAAALFSLSVLEEYKAKIGRSGAVKAL 590
Query: 1054 VDLLESGTLRGKKDAATALFNLSIFHENKVRIVQAGAVKHLIELMDPDTGMIDKCVALLA 1233
VDLL GT+RGKKDAATALFNLSIFHENK RIVQAGAVK+L+ELMDP TGM+DK VALLA
Sbjct: 591 VDLLAYGTIRGKKDAATALFNLSIFHENKARIVQAGAVKYLVELMDPVTGMVDKAVALLA 650
Query: 1234 NLSTIPEGRSAITREGGIPLLVEVLETGSQRGKENAASILLQLCFNSQKFCTLVLQEGAV 1413
NLSTI EGR AI + GGIPLLVEV+E+GSQRGKENAASIL+QLC NS KFCTLVLQEGAV
Sbjct: 651 NLSTISEGRMAIAKAGGIPLLVEVVESGSQRGKENAASILMQLCLNSPKFCTLVLQEGAV 710
Query: 1414 PPLVALSQCGTPRAKEKAHQILSHFRNQREGAVGKAK 1524
PPLVALSQ GTPRAKEKA Q+LSHFR+QREG+ GK K
Sbjct: 711 PPLVALSQSGTPRAKEKAQQLLSHFRSQREGSAGKGK 747
>ref|XP_002302042.1| predicted protein [Populus trichocarpa] gi|222843768|gb|EEE81315.1|
predicted protein [Populus trichocarpa]
Length = 753
Score = 537 bits (1384), Expect = e-150
Identities = 307/515 (59%), Positives = 359/515 (69%), Gaps = 8/515 (1%)
Frame = +1
Query: 4 CPKTRQDLAHANLITNYTVKDLIANWCEDNNIRRCDTAHGNNASPLPISANVPSQDFTRA 183
CP+TRQ L+H NLI NYTVK +IANWCE+NN+R + NN + A+ D
Sbjct: 277 CPRTRQTLSHTNLIPNYTVKAMIANWCEENNVRVSSHSDCNN----HVLAS-SHHDLLHL 331
Query: 184 ESF--RCCFYSNNSTPRSSLEAGHRSQKKKVGDSSKCIED-----NSKVIPKCDQSSPGQ 342
+SF RC + +NST RSS+E G+ +K+ +G SS+ + N + S G
Sbjct: 332 DSFRNRCSLHRSNSTSRSSVEVGNGFEKQVIGVSSRLSGEEFNRYNVTGTESFEHPSQGH 391
Query: 343 SYIHSRTXXXXXXXXXXXYLPPSFATNLHEASDLSSKHGHTSEFFGEVTSNCSVSSPSKE 522
SYIHSR+ Y+PP E LS+KH + ++F
Sbjct: 392 SYIHSRSESTSSAISSIEYVPPV----SDEMLKLSTKHDNVNDF---------------- 431
Query: 523 AGFSPWLSGRKYHSSKTVTAVADNGS-NHQRSFSLPFSDSGFDDLTTSSHVEKLVEDLKV 699
KT +A NGS N+ R+ SL FSDSG DLT +S V+KLVE LK
Sbjct: 432 --------------PKTQVDMASNGSHNYSRTNSLQFSDSGSHDLTKTSQVKKLVEGLKS 477
Query: 700 QCSDTQTTAAAELRLLAKHNMDNRLIIAHCGAIPPLISLLYSVKKLTQEHAVTTLLNLSI 879
++ QT AA ELRLLAKH+M+NR+II H GAI PL+SLL S KLTQEHAVT LLNLSI
Sbjct: 478 LSNEVQTKAAEELRLLAKHDMENRIIIGHSGAIRPLLSLLSSEVKLTQEHAVTALLNLSI 537
Query: 880 NENNKNMIAEAGAIEPLIHVLKSGNAGAKENGAATLFSLSVLEEYKIKIGRSAAVKALVD 1059
NE+NK +IAEAGAIEP+IHVL+SGN GAKEN AA LFSLSVLEEYK KIGRS AVKALVD
Sbjct: 538 NEDNKAIIAEAGAIEPIIHVLRSGNNGAKENSAAALFSLSVLEEYKAKIGRSGAVKALVD 597
Query: 1060 LLESGTLRGKKDAATALFNLSIFHENKVRIVQAGAVKHLIELMDPDTGMIDKCVALLANL 1239
LL SGTLRGKKDAAT LFNLSIFHENK RIVQAGAVK+L+ELMDP TGM+DK VALLANL
Sbjct: 598 LLSSGTLRGKKDAATTLFNLSIFHENKARIVQAGAVKYLVELMDPVTGMVDKAVALLANL 657
Query: 1240 STIPEGRSAITREGGIPLLVEVLETGSQRGKENAASILLQLCFNSQKFCTLVLQEGAVPP 1419
STI EGR AI + GGIPLLVEV+E+GSQRGKENAASIL+QLC +S KFCTLVLQEGAVPP
Sbjct: 658 STIGEGRLAIAKAGGIPLLVEVVESGSQRGKENAASILMQLCLSSPKFCTLVLQEGAVPP 717
Query: 1420 LVALSQCGTPRAKEKAHQILSHFRNQREGAVGKAK 1524
LVALSQ GTPRAKEKA Q+LSHFR+QRE + GK +
Sbjct: 718 LVALSQSGTPRAKEKAQQLLSHFRSQREASAGKGR 752
>ref|XP_004148950.1| PREDICTED: U-box domain-containing protein 3-like [Cucumis sativus]
gi|449524836|ref|XP_004169427.1| PREDICTED: U-box
domain-containing protein 3-like [Cucumis sativus]
Length = 775
Score = 534 bits (1375), Expect = e-149
Identities = 296/514 (57%), Positives = 359/514 (69%), Gaps = 6/514 (1%)
Frame = +1
Query: 1 ICPKTRQDLAHANLITNYTVKDLIANWCEDNNIRRCDTAHGNNASPLPISANVPSQDFTR 180
ICP T Q L H NLI+N+TVK +I +WC++N + N S L + Q+ R
Sbjct: 276 ICPNTHQMLTHTNLISNHTVKAMILSWCDENKL---------NFSSLSSLVQLSQQNLNR 326
Query: 181 AESFRCCFYSNNSTPRSSLEAGHRSQKKKVGDSSKCI------EDNSKVIPKCDQSSPGQ 342
++SF + +NST SS E S K+ GD C+ E K DQ SP Q
Sbjct: 327 SDSFHYSVHGSNSTAGSSPEVEKGSDKQN-GDVFTCLVGENSNEGRRNGTEKFDQPSPQQ 385
Query: 343 SYIHSRTXXXXXXXXXXXYLPPSFATNLHEASDLSSKHGHTSEFFGEVTSNCSVSSPSKE 522
SYI+SR+ Y+P +F +E +S+KH + E GE+TS S S+
Sbjct: 386 SYIYSRSVSASSAFSSIDYIPSAF----NELLKVSNKHEYIKELSGEITSEHPAKSHSEP 441
Query: 523 AGFSPWLSGRKYHSSKTVTAVADNGSNHQRSFSLPFSDSGFDDLTTSSHVEKLVEDLKVQ 702
+GF+ L + + KT T + +NG+++ R SL +S D+L+ H++KL+ DLK Q
Sbjct: 442 SGFTSSLGDGQLQACKTETNMVENGNSNGRMDSLIPVESESDNLSGDLHIKKLIADLKSQ 501
Query: 703 CSDTQTTAAAELRLLAKHNMDNRLIIAHCGAIPPLISLLYSVKKLTQEHAVTTLLNLSIN 882
+ Q AA ELRLLAK N++NR+II CGAI PL+SLLYS KL QEHAVT LLNLSI+
Sbjct: 502 RDEVQMKAAEELRLLAKDNVENRVIIGQCGAIGPLLSLLYSEGKLIQEHAVTALLNLSID 561
Query: 883 ENNKNMIAEAGAIEPLIHVLKSGNAGAKENGAATLFSLSVLEEYKIKIGRSAAVKALVDL 1062
ENNK MIAEAGAIEPLIHVLK+G++ AKEN AA+LFSLSVLEEYK KIGRS A++ALV+L
Sbjct: 562 ENNKAMIAEAGAIEPLIHVLKTGSSAAKENSAASLFSLSVLEEYKAKIGRSGAIRALVEL 621
Query: 1063 LESGTLRGKKDAATALFNLSIFHENKVRIVQAGAVKHLIELMDPDTGMIDKCVALLANLS 1242
L GTLRGKKDAATALFNLSIFHENK RIVQAGAVK+L+EL+D TGM+DK ALLANLS
Sbjct: 622 LGVGTLRGKKDAATALFNLSIFHENKARIVQAGAVKYLVELLDTATGMVDKAAALLANLS 681
Query: 1243 TIPEGRSAITREGGIPLLVEVLETGSQRGKENAASILLQLCFNSQKFCTLVLQEGAVPPL 1422
TI EGR AI REGGIPLLVE++ETG+ RGKENAASILLQLC +S KFC LVLQEGAVPPL
Sbjct: 682 TISEGRLAIAREGGIPLLVEIVETGTMRGKENAASILLQLCLHSNKFCILVLQEGAVPPL 741
Query: 1423 VALSQCGTPRAKEKAHQILSHFRNQREGAVGKAK 1524
VALSQ GTPRAKEKA Q+LSHFRNQR+G GK K
Sbjct: 742 VALSQSGTPRAKEKAQQLLSHFRNQRDGTTGKGK 775