BLASTX nr result

ID: Coptis24_contig00018075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018075
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853...   256   4e-66
emb|CBI23078.3| unnamed protein product [Vitis vinifera]              256   4e-66
ref|XP_002317805.1| predicted protein [Populus trichocarpa] gi|2...   223   5e-56
ref|XP_002524414.1| nucleotide binding protein, putative [Ricinu...   220   3e-55
emb|CAN71593.1| hypothetical protein VITISV_015932 [Vitis vinifera]   216   6e-54

>ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853102 [Vitis vinifera]
          Length = 864

 Score =  256 bits (654), Expect = 4e-66
 Identities = 135/262 (51%), Positives = 172/262 (65%), Gaps = 2/262 (0%)
 Frame = +2

Query: 2    EFQISGSYDAHIQVITGLTWAFNGRSLYSCSQDDSLRSWILHGGSLYEAPIPSNS-FVLQ 178
            +F   GSY+AH  V+TGL WAF+G  LYSCSQD+S+RSW L G SL E PIP N+  V  
Sbjct: 399  KFDRIGSYNAHDHVVTGLAWAFDGCCLYSCSQDNSVRSWSLCGNSLDEVPIPPNTPGVKN 458

Query: 179  SSVNLPQASDSCFGLALSPGNLVLTVVHGFDIDLLDPMYEVRTQKAGLEFFLIGGQQLGP 358
             + +LP    SC+G+A+SPGNLV+ V  GFD  LL+PMY+ RTQKA +EFF IGGQQL  
Sbjct: 459  PADDLPYLFGSCYGVAVSPGNLVVAVARGFDAGLLNPMYQARTQKAAIEFFWIGGQQLES 518

Query: 359  SPERCLEFGAERCPDFSEGEMVCWESNILWSLKQYECVDKPLVIWDVIASFLAIKHSAKS 538
            S  R LEFG E  P F + E++ WE N+LW L QYE +DKPLV+WD++A+ LA K SA  
Sbjct: 519  STNRNLEFGIENFPGFPKKELIYWECNMLWYLSQYEHLDKPLVVWDIVAALLAFKQSAPK 578

Query: 539  YELCIMMKWISSWCGGCDAGSSMKKMLFHVSQITSKLPSRQLHLLNVICRRFVLSGLKVD 718
            Y   +++KW+S        G S   +L H S+  S   +R+LHL N+ICR  VLS LK D
Sbjct: 579  YVELVLVKWLSVSNVESHLGLSTGNILSHASRTFSNTTTRKLHLFNIICRHVVLSELKAD 638

Query: 719  IHNSEMYDLEGV-GVEDEHLNL 781
              NS+  +LE   G E+E L L
Sbjct: 639  KINSKQPNLEEFGGAEEEKLKL 660


>emb|CBI23078.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  256 bits (654), Expect = 4e-66
 Identities = 135/262 (51%), Positives = 172/262 (65%), Gaps = 2/262 (0%)
 Frame = +2

Query: 2    EFQISGSYDAHIQVITGLTWAFNGRSLYSCSQDDSLRSWILHGGSLYEAPIPSNS-FVLQ 178
            +F   GSY+AH  V+TGL WAF+G  LYSCSQD+S+RSW L G SL E PIP N+  V  
Sbjct: 335  KFDRIGSYNAHDHVVTGLAWAFDGCCLYSCSQDNSVRSWSLCGNSLDEVPIPPNTPGVKN 394

Query: 179  SSVNLPQASDSCFGLALSPGNLVLTVVHGFDIDLLDPMYEVRTQKAGLEFFLIGGQQLGP 358
             + +LP    SC+G+A+SPGNLV+ V  GFD  LL+PMY+ RTQKA +EFF IGGQQL  
Sbjct: 395  PADDLPYLFGSCYGVAVSPGNLVVAVARGFDAGLLNPMYQARTQKAAIEFFWIGGQQLES 454

Query: 359  SPERCLEFGAERCPDFSEGEMVCWESNILWSLKQYECVDKPLVIWDVIASFLAIKHSAKS 538
            S  R LEFG E  P F + E++ WE N+LW L QYE +DKPLV+WD++A+ LA K SA  
Sbjct: 455  STNRNLEFGIENFPGFPKKELIYWECNMLWYLSQYEHLDKPLVVWDIVAALLAFKQSAPK 514

Query: 539  YELCIMMKWISSWCGGCDAGSSMKKMLFHVSQITSKLPSRQLHLLNVICRRFVLSGLKVD 718
            Y   +++KW+S        G S   +L H S+  S   +R+LHL N+ICR  VLS LK D
Sbjct: 515  YVELVLVKWLSVSNVESHLGLSTGNILSHASRTFSNTTTRKLHLFNIICRHVVLSELKAD 574

Query: 719  IHNSEMYDLEGV-GVEDEHLNL 781
              NS+  +LE   G E+E L L
Sbjct: 575  KINSKQPNLEEFGGAEEEKLKL 596


>ref|XP_002317805.1| predicted protein [Populus trichocarpa] gi|222858478|gb|EEE96025.1|
            predicted protein [Populus trichocarpa]
          Length = 894

 Score =  223 bits (567), Expect = 5e-56
 Identities = 119/253 (47%), Positives = 159/253 (62%)
 Frame = +2

Query: 23   YDAHIQVITGLTWAFNGRSLYSCSQDDSLRSWILHGGSLYEAPIPSNSFVLQSSVNLPQA 202
            YDAH  V+TGL WAF+G  LYSC Q++ +R+W+LHG +L E  IPSN+  L+SS +LP  
Sbjct: 440  YDAHDCVVTGLAWAFDGCCLYSCGQENYVRAWVLHGSALCEVSIPSNTPGLRSSNDLPNV 499

Query: 203  SDSCFGLALSPGNLVLTVVHGFDIDLLDPMYEVRTQKAGLEFFLIGGQQLGPSPERCLEF 382
              SC G+A SPGN+ L +V   D D LDPMYE R QKA +EF  IGGQQ         +F
Sbjct: 500  FVSCLGVAASPGNIALAMVRNVDGDSLDPMYEGRLQKAVVEFLWIGGQQKDILSPSSSDF 559

Query: 383  GAERCPDFSEGEMVCWESNILWSLKQYECVDKPLVIWDVIASFLAIKHSAKSYELCIMMK 562
             +E    FS  E+  WES+ILW L +YE +D PLV+WD++A+ LA K SA  Y   I++K
Sbjct: 560  TSEAFLGFSANELNYWESDILWYLTKYENLDNPLVVWDIVAALLAFKQSAPKYMDRILVK 619

Query: 563  WISSWCGGCDAGSSMKKMLFHVSQITSKLPSRQLHLLNVICRRFVLSGLKVDIHNSEMYD 742
            W+S    G   G S+  +L  + +  SK+ SRQLHLLN+ICRR +LS +K +  N ++  
Sbjct: 620  WLSVTFLGSYTGLSIGDVLTCIPENFSKITSRQLHLLNIICRRVMLSDVKAEEINCKVNL 679

Query: 743  LEGVGVEDEHLNL 781
                  + EHL L
Sbjct: 680  GGSAAAKAEHLTL 692


>ref|XP_002524414.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223536298|gb|EEF37949.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 847

 Score =  220 bits (560), Expect = 3e-55
 Identities = 123/260 (47%), Positives = 160/260 (61%)
 Frame = +2

Query: 2    EFQISGSYDAHIQVITGLTWAFNGRSLYSCSQDDSLRSWILHGGSLYEAPIPSNSFVLQS 181
            EF   GS DAH  V+TGL WAF G  LYSC QD+ +  W+L G +L E P PSN+  L S
Sbjct: 461  EFSKCGSNDAHDYVVTGLAWAFEG-CLYSCGQDNYVHCWLLRGNALCEVPFPSNTPSL-S 518

Query: 182  SVNLPQASDSCFGLALSPGNLVLTVVHGFDIDLLDPMYEVRTQKAGLEFFLIGGQQLGPS 361
              +LP    SC GLA+SPGNLV+ +V   D++ LD MYE R QKA +EFF IGGQQ  P 
Sbjct: 519  LTDLPDVFLSCLGLAISPGNLVVAMVRNLDVEQLDHMYEARAQKAIVEFFWIGGQQWDPL 578

Query: 362  PERCLEFGAERCPDFSEGEMVCWESNILWSLKQYECVDKPLVIWDVIASFLAIKHSAKSY 541
             +  LE  +E    FSE E+V WES+ILWSLK+ E + KPLV+WD+IA+ LA K     Y
Sbjct: 579  SKTSLELASESVFGFSEKELVYWESSILWSLKKIEDLQKPLVMWDIIAALLAFKKFIPKY 638

Query: 542  ELCIMMKWISSWCGGCDAGSSMKKMLFHVSQITSKLPSRQLHLLNVICRRFVLSGLKVDI 721
               I+ +++S    G     S+ ++L  +S   +K+ SR LHLLN+ICR  VLS LK D 
Sbjct: 639  ADHILARYLSMTFLGSHINLSINEILMRISDNLAKVASRLLHLLNIICRCLVLSDLKSDE 698

Query: 722  HNSEMYDLEGVGVEDEHLNL 781
             NS++   E     +E  +L
Sbjct: 699  INSKVELEEPTSTAEEQQSL 718


>emb|CAN71593.1| hypothetical protein VITISV_015932 [Vitis vinifera]
          Length = 829

 Score =  216 bits (549), Expect = 6e-54
 Identities = 122/262 (46%), Positives = 157/262 (59%), Gaps = 2/262 (0%)
 Frame = +2

Query: 2    EFQISGSYDAHIQVITGLTWAFNGRSLYSCSQDDSLRSWILHGGSLYEAPIPSNS-FVLQ 178
            +F   GSY+AH  V                  D+S+RSW L G SL E PIP N+  V  
Sbjct: 399  KFDRIGSYNAHDHV------------------DNSVRSWSLCGNSLDEVPIPPNTPGVKN 440

Query: 179  SSVNLPQASDSCFGLALSPGNLVLTVVHGFDIDLLDPMYEVRTQKAGLEFFLIGGQQLGP 358
             + +LP    SC+G+A+SPGNLV+ V  GFD  LL+PMY+ RTQKA +EFF IGGQQL  
Sbjct: 441  PADDLPYLFGSCYGVAVSPGNLVVAVARGFDAGLLNPMYQARTQKAAIEFFWIGGQQLES 500

Query: 359  SPERCLEFGAERCPDFSEGEMVCWESNILWSLKQYECVDKPLVIWDVIASFLAIKHSAKS 538
            S  R LEFG E  P F + E++ WE N+LW L QYE +DKPLV+WD++A+ LA K SA  
Sbjct: 501  STNRNLEFGIENFPGFPKKELIYWECNMLWYLSQYEHLDKPLVVWDIVAALLAFKQSAPK 560

Query: 539  YELCIMMKWISSWCGGCDAGSSMKKMLFHVSQITSKLPSRQLHLLNVICRRFVLSGLKVD 718
            Y   +++KW+S        G S   +L H S+  S   +R+LHL N+ICR  VLS LK D
Sbjct: 561  YVELVLVKWLSVSNVESHLGLSTGXILSHASRTFSNTTTRKLHLFNIICRHVVLSELKAD 620

Query: 719  IHNSEMYDLEGV-GVEDEHLNL 781
              NS+  +LE   G E+E L L
Sbjct: 621  KINSKQPNLEEFGGAEEEXLKL 642


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