BLASTX nr result

ID: Coptis24_contig00018072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018072
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531170.1| carbon catabolite repressor protein, putativ...   137   1e-30
ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1...   134   1e-29
ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote...   130   1e-28
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]   130   1e-28
ref|XP_004156011.1| PREDICTED: carbon catabolite repressor prote...   126   2e-27

>ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis]
           gi|223529240|gb|EEF31213.1| carbon catabolite repressor
           protein, putative [Ricinus communis]
          Length = 603

 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/106 (64%), Positives = 75/106 (70%)
 Frame = +3

Query: 3   STPSIGRNTSLSDGSTPSYPATVTERSGGETWFEVGRLKTYTPTADDIGHVLKFECVSFD 182
           S  S     SL++GS P YPA V +RSGGETWFEVGR KTYTP+ADDIGHVLKFECV  D
Sbjct: 141 SLSSSASTASLTNGSAPLYPAAVAQRSGGETWFEVGRSKTYTPSADDIGHVLKFECVVVD 200

Query: 183 AEKKLPVGHANTILTSHVIXXXXXXXXXXXXXNGVDVMGNLDLDGR 320
           AE KLPVGH NTILTS VI             +G+DVMG+LD DGR
Sbjct: 201 AESKLPVGHPNTILTSRVIPAPSPTPRRLIPVSGIDVMGHLDSDGR 246


>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
           unknown [Populus trichocarpa]
           gi|222867975|gb|EEF05106.1| predicted protein [Populus
           trichocarpa]
          Length = 603

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/99 (65%), Positives = 74/99 (74%)
 Frame = +3

Query: 24  NTSLSDGSTPSYPATVTERSGGETWFEVGRLKTYTPTADDIGHVLKFECVSFDAEKKLPV 203
           + SL++GSTP YPA VT+RSGGETWFEVGR KTYTP+ADDIGHVLKFECV  DAE KLPV
Sbjct: 148 SASLTNGSTPLYPAAVTQRSGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAETKLPV 207

Query: 204 GHANTILTSHVIXXXXXXXXXXXXXNGVDVMGNLDLDGR 320
           GH+NT+LTS VI             +G+D M  LD DGR
Sbjct: 208 GHSNTLLTSRVIPAPSPTPRRLISVSGLDAMAPLDSDGR 246


>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
           vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
           product [Vitis vinifera]
          Length = 603

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/99 (64%), Positives = 73/99 (73%)
 Frame = +3

Query: 24  NTSLSDGSTPSYPATVTERSGGETWFEVGRLKTYTPTADDIGHVLKFECVSFDAEKKLPV 203
           + SL++GS P YPA VT+RSGGETWFEVGR KTYTPTADDIGHVLKFECV  DAE KL V
Sbjct: 148 SASLANGSAPLYPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVLKFECVVVDAETKLTV 207

Query: 204 GHANTILTSHVIXXXXXXXXXXXXXNGVDVMGNLDLDGR 320
           GH + ILTS VI             +GVD++G+LD DGR
Sbjct: 208 GHGSNILTSRVIPAPSPTPRHLISVSGVDMVGHLDSDGR 246


>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
          Length = 603

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/99 (64%), Positives = 73/99 (73%)
 Frame = +3

Query: 24  NTSLSDGSTPSYPATVTERSGGETWFEVGRLKTYTPTADDIGHVLKFECVSFDAEKKLPV 203
           + SL++GS P YPA VT+RSGGETWFEVGR KTYTPTADDIGHVLKFECV  DAE KL V
Sbjct: 148 SASLANGSAPLYPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVLKFECVVVDAETKLTV 207

Query: 204 GHANTILTSHVIXXXXXXXXXXXXXNGVDVMGNLDLDGR 320
           GH + ILTS VI             +GVD++G+LD DGR
Sbjct: 208 GHGSNILTSRVIPAPSPTPRHLISVSGVDMVGHLDSDGR 246


>ref|XP_004156011.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1-like
           [Cucumis sativus]
          Length = 603

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/99 (62%), Positives = 72/99 (72%)
 Frame = +3

Query: 24  NTSLSDGSTPSYPATVTERSGGETWFEVGRLKTYTPTADDIGHVLKFECVSFDAEKKLPV 203
           +TSL++GSTP YP++ T+RSGGETWFEVGR KTYTP+ADDIGHVLKFECV  DAE KL  
Sbjct: 148 STSLTNGSTPFYPSSTTQRSGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAESKLAS 207

Query: 204 GHANTILTSHVIXXXXXXXXXXXXXNGVDVMGNLDLDGR 320
           G  NT+LTS VI             +GVDV+G LD  GR
Sbjct: 208 GPVNTLLTSRVIPAPSPSPRCLVPVSGVDVIGQLDSSGR 246


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