BLASTX nr result

ID: Coptis24_contig00018066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018066
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine...   125   7e-27
ref|XP_002510333.1| serine-threonine protein kinase, plant-type,...   120   2e-25
ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002533279.1| serine-threonine protein kinase, plant-type,...   115   4e-24
ref|XP_003544429.1| PREDICTED: leucine-rich repeat receptor prot...   105   8e-21

>ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Vitis vinifera]
          Length = 622

 Score =  125 bits (313), Expect = 7e-27
 Identities = 67/112 (59%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
 Frame = -3

Query: 591 APEYLETGLVTPKIDVYAFGVVMLELITGMNVVMMHDGREILLSAAMISLMEGGNMEREL 412
           APEY+E G +TPK+DVYAFGVVMLELITG + V++ +  E+LLS AMIS+ME GN E EL
Sbjct: 503 APEYIEAGSITPKVDVYAFGVVMLELITGKDAVIIQNEEEVLLSEAMISIMERGNAEIEL 562

Query: 411 YKFIDP-NLSEYRMDLGLAIAKLSVACLKRDPASRPSMDEVVSTLGRIQRDE 259
             F+DP  L    ++    IAKLS+ACL +D A RPSM EVVSTL +IQ D+
Sbjct: 563 GHFLDPCLLGNNGIESATRIAKLSIACLTKDQARRPSMGEVVSTLLKIQVDQ 614


>ref|XP_002510333.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223551034|gb|EEF52520.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 637

 Score =  120 bits (301), Expect = 2e-25
 Identities = 69/136 (50%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
 Frame = -3

Query: 591 APEYLETGLVTPKIDVYAFGVVMLELITGMNVVMMHDGREILLSAAMISLMEGGNMEREL 412
           APEY++ G VTPKIDVYAFG+V+LELITG + V M DG+E LLS A+ S+ME  N E EL
Sbjct: 492 APEYVQAGQVTPKIDVYAFGIVLLELITGKDAVFMRDGKETLLSKAIFSVMEKENAEAEL 551

Query: 411 YKFIDPNLSEYRMD-LGLAIAKLSVACLKRDPASRPSMDEVVSTLGRIQRDELVLQSSYA 235
              IDP+ +  R   L L +A++S+ACL + PA RPSM EVVSTL +IQ +    +S   
Sbjct: 552 AFVIDPSFTGGRQSKLALRLARVSLACLTQVPARRPSMGEVVSTLVKIQTELAKSESLNV 611

Query: 234 *RF*ESSGSVMIGTWC 187
                +S  V +  WC
Sbjct: 612 -----NSIDVAVPVWC 622


>ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|222835216|gb|EEE73651.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  117 bits (294), Expect = 1e-24
 Identities = 63/109 (57%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
 Frame = -3

Query: 591 APEYLETGLVTPKIDVYAFGVVMLELITGMNVVMMHDGREILLSAAMISLMEGGNMEREL 412
           APEY+  G VTPKIDVYAFGV++LELITG + V   DGRE LLS  + S+ME  N E EL
Sbjct: 495 APEYVREGQVTPKIDVYAFGVILLELITGKDAVFTQDGREALLSTEIFSIMENKNPEVEL 554

Query: 411 YKFIDPNL-SEYRMDLGLAIAKLSVACLKRDPASRPSMDEVVSTLGRIQ 268
             F+DP L      +  L +AK+SVACL ++PA RPSM+EVVS L +IQ
Sbjct: 555 DFFVDPALKGSCGTNFALCLAKVSVACLMKEPARRPSMEEVVSVLLKIQ 603


>ref|XP_002533279.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223526904|gb|EEF29111.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 617

 Score =  115 bits (289), Expect = 4e-24
 Identities = 59/111 (53%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
 Frame = -3

Query: 591 APEYLETGLVTPKIDVYAFGVVMLELITGMNVVMMHDGREILLSAAMISLMEGGNMEREL 412
           APE+++ GLVTP+ID+YAFGVV+LEL+TG   V M + R++ LS  +IS+ME  N E  L
Sbjct: 501 APEFIDFGLVTPEIDIYAFGVVLLELVTGKEAVYMQEERKVQLSETIISIMEKENAEARL 560

Query: 411 YKFIDPNL-SEYRMDLGLAIAKLSVACLKRDPASRPSMDEVVSTLGRIQRD 262
              +DPNL S++ M++ L + KLS+ACL ++P SRPSM E+VS L +IQ D
Sbjct: 561 GCIVDPNLQSQHSMEVVLRMVKLSLACLAQEPESRPSMAEIVSALLKIQLD 611


>ref|XP_003544429.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
           [Glycine max]
          Length = 636

 Score =  105 bits (261), Expect = 8e-21
 Identities = 55/110 (50%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
 Frame = -3

Query: 591 APEYLETGLVTPKIDVYAFGVVMLELITGMNVVMMHDGREILLSAAMISLMEGGNMEREL 412
           APEYLE G+VT K+DV+AFGVV+LELITG + V +HDGRE++L A +++L+   N+E ++
Sbjct: 506 APEYLEAGMVTTKMDVFAFGVVLLELITGKDSVTLHDGREVMLHAIIVNLIGKENLEEKV 565

Query: 411 YKFIDPNLS---EYRMDLGLAIAKLSVACLKRDPASRPSMDEVVSTLGRI 271
             FIDP L+      +     + KL +ACL ++PA RP+M EVVS+L +I
Sbjct: 566 SLFIDPCLTVTGNSEIVCAPQLVKLGLACLIQEPAERPTMVEVVSSLLKI 615


Top