BLASTX nr result

ID: Coptis24_contig00018062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018062
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63279.1| hypothetical protein VITISV_023249 [Vitis vinifera]   251   1e-64
ref|XP_002284123.1| PREDICTED: uncharacterized protein LOC100254...   251   2e-64
ref|XP_002531065.1| metal ion binding protein, putative [Ricinus...   248   9e-64
ref|XP_002315894.1| predicted protein [Populus trichocarpa] gi|2...   247   3e-63
ref|XP_002272293.1| PREDICTED: uncharacterized protein LOC100255...   244   1e-62

>emb|CAN63279.1| hypothetical protein VITISV_023249 [Vitis vinifera]
          Length = 170

 Score =  251 bits (641), Expect = 1e-64
 Identities = 119/152 (78%), Positives = 140/152 (92%)
 Frame = +2

Query: 86  MGALDYLSNFCTVSSTSIRKKRKPMQTVEIKVKMDCDGCERRVKSSVSSMKGVRSVQVNR 265
           MGALDY SN CTV+ST  + KRKPMQTV+IKVKMDCDGCERRVK++VSSMKGV++V +NR
Sbjct: 1   MGALDYFSNLCTVTSTR-KSKRKPMQTVDIKVKMDCDGCERRVKNAVSSMKGVKTVDINR 59

Query: 266 KQSQVIVTGYVEPNKVLKRVKSTGKRAEFWPYIPYNLVAYPYVAQAYDKKAPAGYVKNVV 445
           KQS+V V+G+V+PNKVLKRVKSTGKRAEFWPY+PYNLV YPY+ +AYDKKAP+GYVKNVV
Sbjct: 60  KQSRVTVSGFVDPNKVLKRVKSTGKRAEFWPYVPYNLVYYPYIKEAYDKKAPSGYVKNVV 119

Query: 446 QALPSPNAPDERLTSLFSDENPHACSIM*NKE 541
           QALPSP+A DERLT+LFSD+NP+ACSIM  K+
Sbjct: 120 QALPSPSATDERLTTLFSDDNPNACSIMDYKD 151


>ref|XP_002284123.1| PREDICTED: uncharacterized protein LOC100254317 isoform 1 [Vitis
           vinifera] gi|297737722|emb|CBI26923.3| unnamed protein
           product [Vitis vinifera]
          Length = 147

 Score =  251 bits (640), Expect = 2e-64
 Identities = 118/148 (79%), Positives = 138/148 (93%)
 Frame = +2

Query: 86  MGALDYLSNFCTVSSTSIRKKRKPMQTVEIKVKMDCDGCERRVKSSVSSMKGVRSVQVNR 265
           MGALDY SN CTV+ST  + KRKPMQTV+IKVKMDCDGCERRVK++VSSMKGV++V +NR
Sbjct: 1   MGALDYFSNLCTVTSTR-KSKRKPMQTVDIKVKMDCDGCERRVKNAVSSMKGVKTVDINR 59

Query: 266 KQSQVIVTGYVEPNKVLKRVKSTGKRAEFWPYIPYNLVAYPYVAQAYDKKAPAGYVKNVV 445
           KQS+V V+G+V+PNKVLKRVKSTGKRAEFWPY+PYNLV YPY+ +AYDKKAP+GYVKNVV
Sbjct: 60  KQSRVTVSGFVDPNKVLKRVKSTGKRAEFWPYVPYNLVYYPYIKEAYDKKAPSGYVKNVV 119

Query: 446 QALPSPNAPDERLTSLFSDENPHACSIM 529
           QALPSP+A DERLT+LFSD+NP+ACSIM
Sbjct: 120 QALPSPSATDERLTTLFSDDNPNACSIM 147


>ref|XP_002531065.1| metal ion binding protein, putative [Ricinus communis]
           gi|223529360|gb|EEF31326.1| metal ion binding protein,
           putative [Ricinus communis]
          Length = 150

 Score =  248 bits (634), Expect = 9e-64
 Identities = 119/150 (79%), Positives = 138/150 (92%), Gaps = 2/150 (1%)
 Frame = +2

Query: 86  MGALDYLSNFCTVSSTSIRKKRK--PMQTVEIKVKMDCDGCERRVKSSVSSMKGVRSVQV 259
           MGALD LS++ +   T  RKKRK  PMQTVEIKVKMDCDGCERRVK +VS++KGV+SV+V
Sbjct: 1   MGALDDLSDYLSDLFTYARKKRKRKPMQTVEIKVKMDCDGCERRVKHAVSNIKGVKSVEV 60

Query: 260 NRKQSQVIVTGYVEPNKVLKRVKSTGKRAEFWPYIPYNLVAYPYVAQAYDKKAPAGYVKN 439
           NRKQS+V+V+GY+EPNKVLK+V+STGKRAEFWPY+PYNLVAYPYVAQAYDKKAP+GYVKN
Sbjct: 61  NRKQSRVVVSGYIEPNKVLKKVRSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVKN 120

Query: 440 VVQALPSPNAPDERLTSLFSDENPHACSIM 529
           V QALPSPNAPDE+ T++FSDENPHACSIM
Sbjct: 121 VFQALPSPNAPDEKYTTMFSDENPHACSIM 150


>ref|XP_002315894.1| predicted protein [Populus trichocarpa] gi|222864934|gb|EEF02065.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  247 bits (630), Expect = 3e-63
 Identities = 123/150 (82%), Positives = 136/150 (90%), Gaps = 2/150 (1%)
 Frame = +2

Query: 86  MGALDYLSNFCTVSSTSIRKKRK--PMQTVEIKVKMDCDGCERRVKSSVSSMKGVRSVQV 259
           MGALD LS++ +   T  RKKRK  PMQTV+IKVKMDCDGCERRVK+SVSSMKGV+SV+V
Sbjct: 1   MGALDDLSDYLSDLFTVARKKRKRKPMQTVDIKVKMDCDGCERRVKNSVSSMKGVKSVEV 60

Query: 260 NRKQSQVIVTGYVEPNKVLKRVKSTGKRAEFWPYIPYNLVAYPYVAQAYDKKAPAGYVKN 439
           NRKQS+V V+G VEPNKVLK+VKSTGKRAEFWPY+PYNLVAYPY AQAYDKKAPAGYVKN
Sbjct: 61  NRKQSRVTVSGNVEPNKVLKKVKSTGKRAEFWPYVPYNLVAYPYAAQAYDKKAPAGYVKN 120

Query: 440 VVQALPSPNAPDERLTSLFSDENPHACSIM 529
           VVQALPSPNA DER TS+FSDENP+ACSIM
Sbjct: 121 VVQALPSPNATDERFTSMFSDENPNACSIM 150


>ref|XP_002272293.1| PREDICTED: uncharacterized protein LOC100255386 [Vitis vinifera]
           gi|296087186|emb|CBI33560.3| unnamed protein product
           [Vitis vinifera]
          Length = 146

 Score =  244 bits (624), Expect = 1e-62
 Identities = 117/148 (79%), Positives = 136/148 (91%)
 Frame = +2

Query: 86  MGALDYLSNFCTVSSTSIRKKRKPMQTVEIKVKMDCDGCERRVKSSVSSMKGVRSVQVNR 265
           MGALDY SNFCTV+ST  + KRKPMQTVEIKVKMDCDGCERRVK++V+SM+GV+SV+V R
Sbjct: 1   MGALDYFSNFCTVTST--KGKRKPMQTVEIKVKMDCDGCERRVKNAVTSMRGVKSVEVIR 58

Query: 266 KQSQVIVTGYVEPNKVLKRVKSTGKRAEFWPYIPYNLVAYPYVAQAYDKKAPAGYVKNVV 445
           KQS+V VTGYV+ NKVLKRVKSTGKRAEFWPYIPYNLV+YPY  QAYDK+APAGYV+NVV
Sbjct: 59  KQSRVTVTGYVDANKVLKRVKSTGKRAEFWPYIPYNLVSYPYATQAYDKRAPAGYVRNVV 118

Query: 446 QALPSPNAPDERLTSLFSDENPHACSIM 529
           QA+  PN P++R+TSLFSD+NP+ACSIM
Sbjct: 119 QAVAVPNDPEDRITSLFSDDNPNACSIM 146


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