BLASTX nr result

ID: Coptis24_contig00018057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018057
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282170.1| PREDICTED: uncharacterized protein LOC100247...   365   7e-99
emb|CAN68227.1| hypothetical protein VITISV_040534 [Vitis vinifera]   361   1e-97
ref|XP_002517149.1| transporter, putative [Ricinus communis] gi|...   354   2e-95
ref|XP_002312528.1| predicted protein [Populus trichocarpa] gi|2...   346   5e-93
ref|XP_002314701.1| predicted protein [Populus trichocarpa] gi|2...   344   1e-92

>ref|XP_002282170.1| PREDICTED: uncharacterized protein LOC100247799 [Vitis vinifera]
           gi|297737041|emb|CBI26242.3| unnamed protein product
           [Vitis vinifera]
          Length = 423

 Score =  365 bits (937), Expect = 7e-99
 Identities = 190/282 (67%), Positives = 217/282 (76%), Gaps = 2/282 (0%)
 Frame = +3

Query: 6   FFRSASAFMNLLLASLKIVSEYYPGRLHKAFIIDPPSLFSYLWKGVRPFLELSPVTMIVS 185
           FFRSASAFMNLLL +LKIV+EYYPGRLHKAF+IDPPSLFSYLWKGVRPFLELSP TM+VS
Sbjct: 145 FFRSASAFMNLLLTALKIVAEYYPGRLHKAFVIDPPSLFSYLWKGVRPFLELSPATMVVS 204

Query: 186 SLDYEESLEYDDFSSFPRSASLRFDXXXXXXXXXXXXXXXXXXXXXXXHNFDSLKPWYLS 365
           SLD+EESLE++DFSS+PR++SLRFD                       H+FDSLKPWYLS
Sbjct: 205 SLDFEESLEFNDFSSYPRASSLRFDPSSIPSTAKIGSCSSSRFSFTVSHHFDSLKPWYLS 264

Query: 366 LTDNSASKVGPNVDPSPSLMGSALISPINARSYSFASPAARTPRGSI--NYRVGPTKKSS 539
           L D S SKVGP   PSPS++G ALISP+NARS SFASPAARTPRG I       P KKS 
Sbjct: 265 LADTSGSKVGP-TSPSPSMLGPALISPLNARSLSFASPAARTPRGGIYGGSASRPAKKSL 323

Query: 540 FCPLTPLPQKVSNISDGCKIKHHPRTPRPSFLQSPALFFKRDNQVSKTDKTRESFLPFLR 719
           F   TPLP++ +   +     +HPRTPRPSFLQSPALFF+++  VS+ DK+RESFLPFL+
Sbjct: 324 FAS-TPLPERTNYGKNDAMSINHPRTPRPSFLQSPALFFRKECHVSRADKSRESFLPFLK 382

Query: 720 FYRMPFDEMYYRSKMKPPLGGLIPIVSSQLKRRYHASQSQRF 845
           FYR P+DEM YRSKM+PPLGGLI IVS QLKRR H S SQRF
Sbjct: 383 FYRRPYDEMIYRSKMRPPLGGLISIVSPQLKRR-HMSVSQRF 423


>emb|CAN68227.1| hypothetical protein VITISV_040534 [Vitis vinifera]
          Length = 465

 Score =  361 bits (927), Expect = 1e-97
 Identities = 189/282 (67%), Positives = 216/282 (76%), Gaps = 2/282 (0%)
 Frame = +3

Query: 6    FFRSASAFMNLLLASLKIVSEYYPGRLHKAFIIDPPSLFSYLWKGVRPFLELSPVTMIVS 185
            FFRSASAFMNLLL +LKIV+EYYPGRLHKAF+IDPPSLFSYLWKGVRPFLELSP TM+VS
Sbjct: 187  FFRSASAFMNLLLTALKIVAEYYPGRLHKAFVIDPPSLFSYLWKGVRPFLELSPATMVVS 246

Query: 186  SLDYEESLEYDDFSSFPRSASLRFDXXXXXXXXXXXXXXXXXXXXXXXHNFDSLKPWYLS 365
            SLD+EESLE++DFSS+PR++SLRFD                       H+FDSLKPWYLS
Sbjct: 247  SLDFEESLEFNDFSSYPRASSLRFDPSSIPSTAKIGSCSSSRFSFTVSHHFDSLKPWYLS 306

Query: 366  LTDNSASKVGPNVDPSPSLMGSALISPINARSYSFASPAARTPRGSI--NYRVGPTKKSS 539
            L D S SKVGP   PSPS++G ALISP+NARS SFASPAARTPRG I       P KKS 
Sbjct: 307  LADTSGSKVGP-TSPSPSMLGPALISPLNARSLSFASPAARTPRGGIYGGSASRPAKKSL 365

Query: 540  FCPLTPLPQKVSNISDGCKIKHHPRTPRPSFLQSPALFFKRDNQVSKTDKTRESFLPFLR 719
            F   TPL ++ +   +     +HPRTPRPSFLQSPALFF+++  VS+ DK+RESFLPFL+
Sbjct: 366  FAS-TPLLERTNYGKNDAMSINHPRTPRPSFLQSPALFFRKECHVSRADKSRESFLPFLK 424

Query: 720  FYRMPFDEMYYRSKMKPPLGGLIPIVSSQLKRRYHASQSQRF 845
            FYR P+DEM YRSKM+PPLGGLI IVS QLKRR H S SQRF
Sbjct: 425  FYRRPYDEMIYRSKMRPPLGGLISIVSPQLKRR-HMSVSQRF 465


>ref|XP_002517149.1| transporter, putative [Ricinus communis]
           gi|223543784|gb|EEF45312.1| transporter, putative
           [Ricinus communis]
          Length = 434

 Score =  354 bits (908), Expect = 2e-95
 Identities = 187/284 (65%), Positives = 221/284 (77%), Gaps = 3/284 (1%)
 Frame = +3

Query: 3   SFFRSASAFMNLLLASLKIVSEYYPGRLHKAFIIDPPSLFSYLWKGVRPFLELSPVTMIV 182
           SFFRSASAFMNLLLA+LKIV++YYP RL+K+FIIDPPSLFSYLWKGVRPF+ELS V M++
Sbjct: 155 SFFRSASAFMNLLLATLKIVADYYPCRLYKSFIIDPPSLFSYLWKGVRPFVELSTVMMVL 214

Query: 183 SSLDYEESLEYDDFSSFPRSASLRFDXXXXXXXXXXXXXXXXXXXXXXXHNFDSLKPWYL 362
           SSLDYEESLE+ DFSS+PR++SLRFD                       H+FDSLKPW+L
Sbjct: 215 SSLDYEESLEFSDFSSYPRASSLRFDTSSVKSTAKIGSCSSSRFSFTVSHHFDSLKPWHL 274

Query: 363 SLTDNSASKVGPNVDPSPSLMGSALISPINARSYSFASPAARTPRGSIN---YRVGPTKK 533
           +LTD S+SKVG     SP+L+G A ISP+NARSYSFASPAARTP GSIN   Y   P+KK
Sbjct: 275 TLTDTSSSKVGSATTTSPALLGPAKISPLNARSYSFASPAARTPLGSINGDSYSCRPSKK 334

Query: 534 SSFCPLTPLPQKVSNISDGCKIKHHPRTPRPSFLQSPALFFKRDNQVSKTDKTRESFLPF 713
           + F P TPLPQ+V+  S+  KI  +PRTPRPSFLQSPALFFK++  V + DK+RESFLPF
Sbjct: 335 TLF-PSTPLPQRVT-ASEPIKIS-YPRTPRPSFLQSPALFFKKECHVMRADKSRESFLPF 391

Query: 714 LRFYRMPFDEMYYRSKMKPPLGGLIPIVSSQLKRRYHASQSQRF 845
           L+FYR P+DEM YRSKM+PPLGGLI IVS  ++RR H S SQRF
Sbjct: 392 LKFYRRPYDEMIYRSKMRPPLGGLISIVSPHIRRR-HVSVSQRF 434


>ref|XP_002312528.1| predicted protein [Populus trichocarpa] gi|222852348|gb|EEE89895.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  346 bits (887), Expect = 5e-93
 Identities = 185/283 (65%), Positives = 217/283 (76%), Gaps = 2/283 (0%)
 Frame = +3

Query: 3   SFFRSASAFMNLLLASLKIVSEYYPGRLHKAFIIDPPSLFSYLWKGVRPFLELSPVTMIV 182
           SFFRSASAFMNLLL +LKIV+EYYPGRL+KAF+IDPPSLFS LWKGVRPF+ELS  T++V
Sbjct: 154 SFFRSASAFMNLLLGTLKIVAEYYPGRLYKAFVIDPPSLFSCLWKGVRPFVELSTATVVV 213

Query: 183 SSLDYEESLEYDDFSSFPRSASLRFDXXXXXXXXXXXXXXXXXXXXXXXHNFDSLKPWYL 362
           SSLD+EESLE++DFSS+PR++SLRFD                       H+FDSLKPW+L
Sbjct: 214 SSLDFEESLEFNDFSSYPRASSLRFDPSSINSTAKIGSCSSSRFSFTVSHHFDSLKPWHL 273

Query: 363 SLTDNSASKVGPNVDPSPSLMGSALISPINARSYSFASPAARTPRGSIN--YRVGPTKKS 536
           SLTD S+SKVGP    S S +G AL+SP+NARSYSFASP AR PRGSIN      PT+KS
Sbjct: 274 SLTDTSSSKVGPT---SLSHLGPALVSPLNARSYSFASPVARAPRGSINGCSYTRPTRKS 330

Query: 537 SFCPLTPLPQKVSNISDGCKIKHHPRTPRPSFLQSPALFFKRDNQVSKTDKTRESFLPFL 716
            F P TPLPQ+V+   D  KI   PRTPRPSFLQSPALFFK++  VSK D++RESF+PF 
Sbjct: 331 LF-PSTPLPQRVTE-GDPIKIS-LPRTPRPSFLQSPALFFKKECHVSKADRSRESFVPFF 387

Query: 717 RFYRMPFDEMYYRSKMKPPLGGLIPIVSSQLKRRYHASQSQRF 845
           +FYR P+DEM YRSKM+PPLGGLI IVS  ++RR H S SQRF
Sbjct: 388 KFYRRPYDEMIYRSKMRPPLGGLISIVSPHIRRR-HVSVSQRF 429


>ref|XP_002314701.1| predicted protein [Populus trichocarpa] gi|222863741|gb|EEF00872.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  344 bits (883), Expect = 1e-92
 Identities = 183/282 (64%), Positives = 215/282 (76%), Gaps = 1/282 (0%)
 Frame = +3

Query: 3   SFFRSASAFMNLLLASLKIVSEYYPGRLHKAFIIDPPSLFSYLWKGVRPFLELSPVTMIV 182
           SFFRSASAFMNLLL +LKIV+EYYPGRL+KAF+IDPPSLF YLWKGVRPF+ELS  TM+V
Sbjct: 152 SFFRSASAFMNLLLGTLKIVAEYYPGRLYKAFVIDPPSLFPYLWKGVRPFVELSTATMVV 211

Query: 183 SSLDYEESLEYDDFSSFPRSASLRFDXXXXXXXXXXXXXXXXXXXXXXXHNFDSLKPWYL 362
           SSLD+EESLE++DFSS+PR++SLR D                       H+FDSLKPW+L
Sbjct: 212 SSLDFEESLEFNDFSSYPRASSLRLDPSSVKSTAKIGSCSSSRFSFTVSHHFDSLKPWHL 271

Query: 363 SLTDNSASKVGPNVDPSPSLMGSALISPINARSYSFASPAARTPRGSIN-YRVGPTKKSS 539
           +LTD SASKVGP    + S +G ALISP+NARS+SFASP ARTPRGS+N        + S
Sbjct: 272 TLTDTSASKVGPT---NLSSLGPALISPLNARSFSFASPVARTPRGSMNGGSYTRLAQKS 328

Query: 540 FCPLTPLPQKVSNISDGCKIKHHPRTPRPSFLQSPALFFKRDNQVSKTDKTRESFLPFLR 719
             P TPLPQ+V+  SD  KI   PRTPRPSFLQSPALFFK++  VSK D++RESF+PFL+
Sbjct: 329 LFPSTPLPQRVTT-SDTLKIS-QPRTPRPSFLQSPALFFKKECHVSKADRSRESFVPFLK 386

Query: 720 FYRMPFDEMYYRSKMKPPLGGLIPIVSSQLKRRYHASQSQRF 845
           FYR P+DEM YRSKM+PPLGGLI IVS  +KRR H S SQRF
Sbjct: 387 FYRRPYDEMIYRSKMRPPLGGLISIVSPHIKRR-HMSVSQRF 427


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