BLASTX nr result
ID: Coptis24_contig00018047
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018047 (385 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002301476.1| multidrug resistance protein ABC transporter... 159 2e-37 emb|CBI36841.3| unnamed protein product [Vitis vinifera] 155 2e-36 ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4... 155 2e-36 ref|XP_002523063.1| multidrug resistance-associated protein 2, 6... 154 5e-36 ref|XP_002321011.1| multidrug resistance protein ABC transporter... 148 5e-34 >ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222843202|gb|EEE80749.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1508 Score = 159 bits (402), Expect = 2e-37 Identities = 82/130 (63%), Positives = 99/130 (76%), Gaps = 3/130 (2%) Frame = +3 Query: 3 TILLVTHQVEFLHNTNLILVMRDGKIVQSGKYNYLLEPGSDFGALVATHKTSMELVEMN- 179 TILLVTHQV+FLHN +LI VMRDG+IVQSGKYN LL G DFGALVA H TSMELVE + Sbjct: 819 TILLVTHQVDFLHNVDLISVMRDGQIVQSGKYNDLLVSGLDFGALVAAHDTSMELVEASS 878 Query: 180 --DSKHSPKPPITQKPACPYPQVANGQNKSLGHSKSEKGTSKLIKDEERETGHVSFRVYK 353 S++SP+PP + + + ANG+NK L H KS+KGTSKLI++EER TG++ VYK Sbjct: 879 EISSENSPRPPKSPRGPSKLGE-ANGENKLLDHPKSDKGTSKLIEEEERATGNIGLHVYK 937 Query: 354 TYSTEAYGWW 383 Y TEA+GWW Sbjct: 938 QYCTEAFGWW 947 >emb|CBI36841.3| unnamed protein product [Vitis vinifera] Length = 1079 Score = 155 bits (393), Expect = 2e-36 Identities = 87/130 (66%), Positives = 99/130 (76%), Gaps = 4/130 (3%) Frame = +3 Query: 3 TILLVTHQVEFLHNTNLILVMRDGKIVQSGKYNYLLEPGSDFGALVATHKTSMELVE--- 173 TILLVTHQV+FLHN +LILVMRDG IVQSGKYN LLE G DF ALVA H+TSMELVE Sbjct: 389 TILLVTHQVDFLHNVDLILVMRDGMIVQSGKYNDLLESGMDFKALVAAHETSMELVEEAG 448 Query: 174 -MNDSKHSPKPPITQKPACPYPQVANGQNKSLGHSKSEKGTSKLIKDEERETGHVSFRVY 350 S++SPK P + +P + + ANG +KS SKS K +SKLIKDEERETG VSF+VY Sbjct: 449 PAITSENSPKLPQSPQPFSNHGE-ANGVDKSGDQSKSNKESSKLIKDEERETGKVSFQVY 507 Query: 351 KTYSTEAYGW 380 K Y TEAYGW Sbjct: 508 KQYCTEAYGW 517 >ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera] Length = 1509 Score = 155 bits (393), Expect = 2e-36 Identities = 87/130 (66%), Positives = 99/130 (76%), Gaps = 4/130 (3%) Frame = +3 Query: 3 TILLVTHQVEFLHNTNLILVMRDGKIVQSGKYNYLLEPGSDFGALVATHKTSMELVE--- 173 TILLVTHQV+FLHN +LILVMRDG IVQSGKYN LLE G DF ALVA H+TSMELVE Sbjct: 819 TILLVTHQVDFLHNVDLILVMRDGMIVQSGKYNDLLESGMDFKALVAAHETSMELVEEAG 878 Query: 174 -MNDSKHSPKPPITQKPACPYPQVANGQNKSLGHSKSEKGTSKLIKDEERETGHVSFRVY 350 S++SPK P + +P + + ANG +KS SKS K +SKLIKDEERETG VSF+VY Sbjct: 879 PAITSENSPKLPQSPQPFSNHGE-ANGVDKSGDQSKSNKESSKLIKDEERETGKVSFQVY 937 Query: 351 KTYSTEAYGW 380 K Y TEAYGW Sbjct: 938 KQYCTEAYGW 947 >ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis] gi|223537625|gb|EEF39248.1| multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis] Length = 1506 Score = 154 bits (390), Expect = 5e-36 Identities = 79/130 (60%), Positives = 98/130 (75%), Gaps = 3/130 (2%) Frame = +3 Query: 3 TILLVTHQVEFLHNTNLILVMRDGKIVQSGKYNYLLEPGSDFGALVATHKTSMELVEMND 182 TILLVTHQV+FLHN +LI+VMRDG IVQSGKYN L++ G DFGALVA H T+MELVE Sbjct: 817 TILLVTHQVDFLHNIDLIMVMRDGMIVQSGKYNNLVKSGMDFGALVAAHDTAMELVEAGT 876 Query: 183 S---KHSPKPPITQKPACPYPQVANGQNKSLGHSKSEKGTSKLIKDEERETGHVSFRVYK 353 + ++SP+PP + + + + ANG+NK L KSEKGTSKL+++EERETG V VYK Sbjct: 877 AVPGENSPRPPKSPQSSSNALE-ANGENKHLDQPKSEKGTSKLVEEEERETGKVGLHVYK 935 Query: 354 TYSTEAYGWW 383 Y T A+GWW Sbjct: 936 QYCTAAFGWW 945 >ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222861784|gb|EEE99326.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1507 Score = 148 bits (373), Expect = 5e-34 Identities = 78/130 (60%), Positives = 95/130 (73%), Gaps = 3/130 (2%) Frame = +3 Query: 3 TILLVTHQVEFLHNTNLILVMRDGKIVQSGKYNYLLEPGSDFGALVATHKTSMELVEMN- 179 TILLVTHQV+FLHN +LI VMRDG+IVQSGKYN LL G DFGALVA H+TSMEL+E++ Sbjct: 818 TILLVTHQVDFLHNVDLISVMRDGQIVQSGKYNDLLASGLDFGALVAAHETSMELLEVSA 877 Query: 180 --DSKHSPKPPITQKPACPYPQVANGQNKSLGHSKSEKGTSKLIKDEERETGHVSFRVYK 353 S++SP PP + + N +NK L KS+KG SKLI++EER TG+V VYK Sbjct: 878 EIPSENSPTPPKFSQGLSKIGE-ENDENKLLDQPKSDKGNSKLIEEEERATGNVGLHVYK 936 Query: 354 TYSTEAYGWW 383 Y TEA+GWW Sbjct: 937 QYCTEAFGWW 946