BLASTX nr result

ID: Coptis24_contig00018040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018040
         (1793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515824.1| Protein SEY1, putative [Ricinus communis] gi...   645   0.0  
ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   634   e-179
ref|XP_003535051.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   627   e-177
ref|XP_004155933.1| PREDICTED: LOW QUALITY PROTEIN: protein ROOT...   622   e-175
ref|XP_004141681.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   622   e-175

>ref|XP_002515824.1| Protein SEY1, putative [Ricinus communis] gi|223545053|gb|EEF46566.1|
            Protein SEY1, putative [Ricinus communis]
          Length = 779

 Score =  645 bits (1665), Expect = 0.0
 Identities = 318/393 (80%), Positives = 350/393 (89%)
 Frame = +2

Query: 611  EESCVTQLIDASGEFNINGLENFIQTVKLSECGLSYAVVAIMGPQSSGKSTLLNHLFHTN 790
            EE C TQLID +G FN+ GL+NF++T KLS+CGLSYAVV+IMGPQSSGKSTLLNHLF+TN
Sbjct: 3    EECCSTQLIDGNGVFNVVGLDNFVRTTKLSDCGLSYAVVSIMGPQSSGKSTLLNHLFYTN 62

Query: 791  FREMDAFRGRSQTTKGIWIAKCVGIQPCTIAMDLEGTDGRERGEDDTTFEKQSALFALAI 970
            FREM+A+ GRSQTTKGIWIA+C GI+P TIAMDLEGTDGRERGEDDT FEKQSALFALAI
Sbjct: 63   FREMNAYTGRSQTTKGIWIARCAGIEPFTIAMDLEGTDGRERGEDDTAFEKQSALFALAI 122

Query: 971  ADIVLINMWCHDIGREHAANKPLLKTVFQVMTRLFSPRKTTLLFVIRDKTKTPLEHLEPV 1150
            ADIVLINMWCHDIGRE AANKPLLKTVFQVM RLFSPRKTTLLFVIRDKTKTPLE+LEPV
Sbjct: 123  ADIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPLEYLEPV 182

Query: 1151 LRDDIQKIWHSVSKPSDHKSTPLSEFFNVEVTALPSYEEKEDQFKEQVAVLRQRFFHSIA 1330
            LR+DIQKIWH+V+KP  HK TPLS+FFNVEV ALPSYEEKE+QFKEQVA LRQRFFHSI+
Sbjct: 183  LREDIQKIWHTVAKPEAHKYTPLSDFFNVEVIALPSYEEKEEQFKEQVAQLRQRFFHSIS 242

Query: 1331 PRGLAGDRRGVVPASAFSFSAQQIWKVIKENRDLDLPAHKVMVATVRCEEIANEKFSCLT 1510
            P GLAGDRRGVVPAS FSFSAQQIWK+IK+N+DLDLPAHKVMVATVRCEEIANEK +CL 
Sbjct: 243  PGGLAGDRRGVVPASGFSFSAQQIWKIIKDNKDLDLPAHKVMVATVRCEEIANEKLNCLI 302

Query: 1511 SDESWLALEASVKTGPVSGFGKKLSTILDIHLSEYDKEAIYFEEEVRNAKRQQLETKALN 1690
            SDE WLAL  +V+ G V GFGKKLSTIL+ +LSEYD EAIYF+E VRNAKR+QLETKAL 
Sbjct: 303  SDEDWLALVEAVQAGTVPGFGKKLSTILETYLSEYDMEAIYFDEGVRNAKRKQLETKALE 362

Query: 1691 YVQPAHQCMLGHLRSRAFENFKKGLEHSFNKGE 1789
             V PA+  +LGHLRS+  ENFK  LE S   GE
Sbjct: 363  LVHPAYISILGHLRSKTLENFKTSLEQSLKSGE 395


>ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine max]
          Length = 829

 Score =  634 bits (1635), Expect = e-179
 Identities = 311/393 (79%), Positives = 350/393 (89%)
 Frame = +2

Query: 611  EESCVTQLIDASGEFNINGLENFIQTVKLSECGLSYAVVAIMGPQSSGKSTLLNHLFHTN 790
            ++ C TQLID  GEFN+ GL+NFI+TV L+ CGLSYAVVAIMGPQSSGKSTL+NHLFHT+
Sbjct: 4    DDCCATQLIDGDGEFNVAGLDNFIRTVNLASCGLSYAVVAIMGPQSSGKSTLMNHLFHTS 63

Query: 791  FREMDAFRGRSQTTKGIWIAKCVGIQPCTIAMDLEGTDGRERGEDDTTFEKQSALFALAI 970
            FREMDAFRGRSQTTKGIWIAKCVGI+P TIAMDLEGTDGRERGEDDT FEKQSALFALAI
Sbjct: 64   FREMDAFRGRSQTTKGIWIAKCVGIEPSTIAMDLEGTDGRERGEDDTAFEKQSALFALAI 123

Query: 971  ADIVLINMWCHDIGREHAANKPLLKTVFQVMTRLFSPRKTTLLFVIRDKTKTPLEHLEPV 1150
            +DIVLINMWCHDIGRE AANKPLLKTVFQVM RLFSPRKTTLLFVIRDKTKTPLE+LEP+
Sbjct: 124  SDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPLENLEPI 183

Query: 1151 LRDDIQKIWHSVSKPSDHKSTPLSEFFNVEVTALPSYEEKEDQFKEQVAVLRQRFFHSIA 1330
            LR+DIQKIW  V KP  H  TPLSEFFNVEVTAL SYE+KED+FKE+VA LRQRFFHSIA
Sbjct: 184  LREDIQKIWDGVRKPQAHLHTPLSEFFNVEVTALSSYEDKEDKFKEEVAQLRQRFFHSIA 243

Query: 1331 PRGLAGDRRGVVPASAFSFSAQQIWKVIKENRDLDLPAHKVMVATVRCEEIANEKFSCLT 1510
            P GLAGDRRGVVPASAFS SAQQIWKVI+EN+DLDLPAHKVMVATVRCEEIANEK + L 
Sbjct: 244  PGGLAGDRRGVVPASAFSISAQQIWKVIRENKDLDLPAHKVMVATVRCEEIANEKLNRLR 303

Query: 1511 SDESWLALEASVKTGPVSGFGKKLSTILDIHLSEYDKEAIYFEEEVRNAKRQQLETKALN 1690
            SD+ WL LE +++ GPV GFG+KLS+I+D  LS+YD+EAI+F+E VRNAKR+QLE+KAL+
Sbjct: 304  SDKGWLELEEAIELGPVRGFGEKLSSIIDACLSQYDEEAIFFDEAVRNAKRKQLESKALD 363

Query: 1691 YVQPAHQCMLGHLRSRAFENFKKGLEHSFNKGE 1789
             V PA+  +LGH+RS+A ++FK  LE S N GE
Sbjct: 364  LVYPAYTTLLGHIRSKALDDFKTKLEQSLNNGE 396


>ref|XP_003535051.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine max]
          Length = 829

 Score =  627 bits (1616), Expect = e-177
 Identities = 306/393 (77%), Positives = 349/393 (88%)
 Frame = +2

Query: 611  EESCVTQLIDASGEFNINGLENFIQTVKLSECGLSYAVVAIMGPQSSGKSTLLNHLFHTN 790
            ++ C TQLID   EFN+ GL++FI+TV L+ CGLSYAVVAIMGPQSSGKSTL+NHLFHT+
Sbjct: 4    DDCCATQLIDGHAEFNVAGLDSFIRTVNLASCGLSYAVVAIMGPQSSGKSTLMNHLFHTS 63

Query: 791  FREMDAFRGRSQTTKGIWIAKCVGIQPCTIAMDLEGTDGRERGEDDTTFEKQSALFALAI 970
            FREMDAFRGRSQTTKGIWIAKCVGI+P TIAMDLEGTDGRERGEDDT FEKQSALFALAI
Sbjct: 64   FREMDAFRGRSQTTKGIWIAKCVGIEPSTIAMDLEGTDGRERGEDDTAFEKQSALFALAI 123

Query: 971  ADIVLINMWCHDIGREHAANKPLLKTVFQVMTRLFSPRKTTLLFVIRDKTKTPLEHLEPV 1150
            +DIVLINMWCHDIGRE AANKPLLKTVFQVM RLFSPRKTTLLFVIRDKTKTPLE+LEP+
Sbjct: 124  SDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPLENLEPI 183

Query: 1151 LRDDIQKIWHSVSKPSDHKSTPLSEFFNVEVTALPSYEEKEDQFKEQVAVLRQRFFHSIA 1330
            LR+DIQKIW  + KP  H+ TPL EFFNVEVTAL SYE+KED+FKE+VA LRQRFFHSIA
Sbjct: 184  LREDIQKIWDGIRKPEAHQHTPLCEFFNVEVTALSSYEDKEDKFKEEVAQLRQRFFHSIA 243

Query: 1331 PRGLAGDRRGVVPASAFSFSAQQIWKVIKENRDLDLPAHKVMVATVRCEEIANEKFSCLT 1510
            P GLAGDRRGVVPASAFS SAQQIWKVI+EN+DLDLPAHKVMVATVRCEEIANEK + L 
Sbjct: 244  PGGLAGDRRGVVPASAFSISAQQIWKVIRENKDLDLPAHKVMVATVRCEEIANEKLNQLR 303

Query: 1511 SDESWLALEASVKTGPVSGFGKKLSTILDIHLSEYDKEAIYFEEEVRNAKRQQLETKALN 1690
            SD+ WL LE +++ GPV GFG+KLS+I+D  LS+YD+EAI+F+E VRNAK++QLE+KAL+
Sbjct: 304  SDKGWLELEEAIELGPVRGFGEKLSSIIDACLSQYDEEAIFFDEAVRNAKQKQLESKALD 363

Query: 1691 YVQPAHQCMLGHLRSRAFENFKKGLEHSFNKGE 1789
             V PA+  +LGH+RS+A ++FK  LE S N GE
Sbjct: 364  LVYPAYTTLLGHIRSKALDDFKTKLEQSLNNGE 396


>ref|XP_004155933.1| PREDICTED: LOW QUALITY PROTEIN: protein ROOT HAIR DEFECTIVE 3 homolog
            1-like [Cucumis sativus]
          Length = 818

 Score =  622 bits (1603), Expect = e-175
 Identities = 305/395 (77%), Positives = 342/395 (86%)
 Frame = +2

Query: 605  EEEESCVTQLIDASGEFNINGLENFIQTVKLSECGLSYAVVAIMGPQSSGKSTLLNHLFH 784
            + +ESC  QLID  G FN +G+E+FI+ VKL ECGLSYAVV+IMGPQSSGKSTLLN+LF 
Sbjct: 3    KSDESCSVQLIDGDGGFNADGIESFIKDVKLGECGLSYAVVSIMGPQSSGKSTLLNNLFG 62

Query: 785  TNFREMDAFRGRSQTTKGIWIAKCVGIQPCTIAMDLEGTDGRERGEDDTTFEKQSALFAL 964
            TNFREMDAF+GRSQTTKGIW+A+C GI+PCT+ MDLEGTDGRERGEDDT FEKQSALFAL
Sbjct: 63   TNFREMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFAL 122

Query: 965  AIADIVLINMWCHDIGREHAANKPLLKTVFQVMTRLFSPRKTTLLFVIRDKTKTPLEHLE 1144
            A++DIVLINMWCHDIGRE AANKPLLKTVFQVM RLFSPRKTTL+FVIRDKT+TPLE+LE
Sbjct: 123  AVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLE 182

Query: 1145 PVLRDDIQKIWHSVSKPSDHKSTPLSEFFNVEVTALPSYEEKEDQFKEQVAVLRQRFFHS 1324
            PVLR+D+QKIW SV KPS HK TPLSEFFNVEV AL SYEEKE+QFKEQVA LRQRFFHS
Sbjct: 183  PVLREDVQKIWDSVPKPSAHKDTPLSEFFNVEVVALSSYEEKEEQFKEQVANLRQRFFHS 242

Query: 1325 IAPRGLAGDRRGVVPASAFSFSAQQIWKVIKENRDLDLPAHKVMVATVRCEEIANEKFSC 1504
            IAP GLAGDRRGVVPAS FSFSAQQIWKVIKEN+DLDLPAHKVMVATVRCEEI NEKF+ 
Sbjct: 243  IAPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIGNEKFTW 302

Query: 1505 LTSDESWLALEASVKTGPVSGFGKKLSTILDIHLSEYDKEAIYFEEEVRNAKRQQLETKA 1684
              S+E WL+LE  V++GPV GFGKKLS+I+D  LSEYD EA +F+E VR+AKR QLE K 
Sbjct: 303  FASNEDWLSLEEEVQSGPVQGFGKKLSSIIDTCLSEYDAEATFFDEGVRSAKRAQLEEKL 362

Query: 1685 LNYVQPAHQCMLGHLRSRAFENFKKGLEHSFNKGE 1789
            L  VQ A Q +LGH+RS  FE FK   + + N+GE
Sbjct: 363  LQLVQSAFQSLLGHIRSGTFEKFKDAFDKALNEGE 397


>ref|XP_004141681.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Cucumis
            sativus]
          Length = 818

 Score =  622 bits (1603), Expect = e-175
 Identities = 305/395 (77%), Positives = 342/395 (86%)
 Frame = +2

Query: 605  EEEESCVTQLIDASGEFNINGLENFIQTVKLSECGLSYAVVAIMGPQSSGKSTLLNHLFH 784
            + +ESC  QLID  G FN +G+E+FI+ VKL ECGLSYAVV+IMGPQSSGKSTLLN+LF 
Sbjct: 3    KSDESCSVQLIDGDGGFNADGIESFIKDVKLGECGLSYAVVSIMGPQSSGKSTLLNNLFG 62

Query: 785  TNFREMDAFRGRSQTTKGIWIAKCVGIQPCTIAMDLEGTDGRERGEDDTTFEKQSALFAL 964
            TNFREMDAF+GRSQTTKGIW+A+C GI+PCT+ MDLEGTDGRERGEDDT FEKQSALFAL
Sbjct: 63   TNFREMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFAL 122

Query: 965  AIADIVLINMWCHDIGREHAANKPLLKTVFQVMTRLFSPRKTTLLFVIRDKTKTPLEHLE 1144
            A++DIVLINMWCHDIGRE AANKPLLKTVFQVM RLFSPRKTTL+FVIRDKT+TPLE+LE
Sbjct: 123  AVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLE 182

Query: 1145 PVLRDDIQKIWHSVSKPSDHKSTPLSEFFNVEVTALPSYEEKEDQFKEQVAVLRQRFFHS 1324
            PVLR+D+QKIW SV KPS HK TPLSEFFNVEV AL SYEEKE+QFKEQVA LRQRFFHS
Sbjct: 183  PVLREDVQKIWDSVPKPSAHKDTPLSEFFNVEVVALSSYEEKEEQFKEQVANLRQRFFHS 242

Query: 1325 IAPRGLAGDRRGVVPASAFSFSAQQIWKVIKENRDLDLPAHKVMVATVRCEEIANEKFSC 1504
            IAP GLAGDRRGVVPAS FSFSAQQIWKVIKEN+DLDLPAHKVMVATVRCEEI NEKF+ 
Sbjct: 243  IAPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIGNEKFTW 302

Query: 1505 LTSDESWLALEASVKTGPVSGFGKKLSTILDIHLSEYDKEAIYFEEEVRNAKRQQLETKA 1684
              S+E WL+LE  V++GPV GFGKKLS+I+D  LSEYD EA +F+E VR+AKR QLE K 
Sbjct: 303  FASNEDWLSLEEEVQSGPVQGFGKKLSSIIDTCLSEYDAEATFFDEGVRSAKRAQLEEKL 362

Query: 1685 LNYVQPAHQCMLGHLRSRAFENFKKGLEHSFNKGE 1789
            L  VQ A Q +LGH+RS  FE FK   + + N+GE
Sbjct: 363  LQLVQSAFQSLLGHIRSGTFEKFKDAFDKALNEGE 397


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