BLASTX nr result

ID: Coptis24_contig00018036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018036
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516797.1| PREDICTED: chloroplast envelope membrane pro...    78   9e-13
ref|XP_002309032.1| predicted protein [Populus trichocarpa] gi|2...    75   9e-12
ref|XP_004170347.1| PREDICTED: uncharacterized protein LOC101227...    72   5e-11
ref|XP_004152847.1| PREDICTED: uncharacterized protein LOC101213...    72   5e-11
ref|XP_003532317.1| PREDICTED: chloroplast envelope membrane pro...    72   6e-11

>ref|XP_003516797.1| PREDICTED: chloroplast envelope membrane protein-like [Glycine max]
          Length = 433

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
 Frame = -1

Query: 267 MFLMSTSLVLCQNFVTTYDPNLPPKKLPSCRISTSLVSLVTKRRRFSGVIVNAS----HR 100
           M LMS+S+VLC N +  ++  L  K   S   S  ++ L +K RR +G I  A     H 
Sbjct: 1   MILMSSSIVLCDNLIL-FNQKLLLKSFVSRGSSNFVIQLSSKTRRLNGFISKAEKHSGHS 59

Query: 99  RKRAWWKEFFLDEDGNWFGLKDDNMVEEEDE 7
           RK +WW++FF ++DGNW GL+DD+MVE E E
Sbjct: 60  RKSSWWQKFFFEDDGNWLGLRDDDMVEAEAE 90


>ref|XP_002309032.1| predicted protein [Populus trichocarpa] gi|222855008|gb|EEE92555.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
 Frame = -1

Query: 258 MSTSLVLCQNFVTTYDPNLPPKKLPSCRISTSLVSL-VTKRRRFSGVIVNASH------R 100
           M+TS+VLC N     + N  P +  +    +S  SL ++ RRRF GV   A        +
Sbjct: 1   MTTSIVLCNNLSFNTNHNQTPLRNRNLFAKSSSFSLQLSNRRRFCGVFPKAKKNGKNHSK 60

Query: 99  RKRAWWKEFFLDEDGNWFGLKDDNMVEEE 13
           RKR WW+ FF DEDGNWFGLKDD++++ E
Sbjct: 61  RKRNWWRRFFFDEDGNWFGLKDDDLLDAE 89


>ref|XP_004170347.1| PREDICTED: uncharacterized protein LOC101227705 [Cucumis sativus]
          Length = 349

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
 Frame = -1

Query: 267 MFLMSTSLVLCQNFV----TTYDPNLPPKKLPSCRISTSLVSLVTKRRRFSGVIVNAS-- 106
           MFLMSTS++L  +F+    T    +L     PSC       +   K + F   ++NA   
Sbjct: 1   MFLMSTSMLLPHHFIFHDCTKLSSSL--SNFPSCNSFHEFSAFGRKGKGFYRHVLNAKKN 58

Query: 105 -HRRKRAWWKEFFLDEDGNWFGLKDDNMVEEEDEDI 1
            + RKR+WW+ FF D+DGNW GLKDD M+E+E E I
Sbjct: 59  GYSRKRSWWQRFFFDDDGNWLGLKDDGMLEDELESI 94


>ref|XP_004152847.1| PREDICTED: uncharacterized protein LOC101213957 [Cucumis sativus]
          Length = 349

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
 Frame = -1

Query: 267 MFLMSTSLVLCQNFV----TTYDPNLPPKKLPSCRISTSLVSLVTKRRRFSGVIVNAS-- 106
           MFLMSTS++L  +F+    T    +L     PSC       +   K + F   ++NA   
Sbjct: 1   MFLMSTSMLLPHHFIFHDCTKLSSSL--SNFPSCNSFHEFSAFGRKGKGFYRHVLNAKKN 58

Query: 105 -HRRKRAWWKEFFLDEDGNWFGLKDDNMVEEEDEDI 1
            + RKR+WW+ FF D+DGNW GLKDD M+E+E E I
Sbjct: 59  GYSRKRSWWQRFFFDDDGNWLGLKDDGMLEDELESI 94


>ref|XP_003532317.1| PREDICTED: chloroplast envelope membrane protein-like [Glycine max]
          Length = 433

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
 Frame = -1

Query: 267 MFLMSTSLVLCQNFVTTYDPNLPPKKLPSCRISTSLV-SLVTKRRRFSGVIVNAS-HRRK 94
           M LMS+S+VLC   +  ++  L  K   S   S++ V    +K RR +G I  A  H RK
Sbjct: 1   MILMSSSIVLCDKNLILFNQKLLLKSFVSHGSSSNFVIQFGSKTRRLNGFISKAEKHSRK 60

Query: 93  RAWWKEFFLDEDGNWFGLKDDNMVEEEDE 7
            +WW+ FF ++DGNW GL+DD+M E E E
Sbjct: 61  SSWWQNFFFNDDGNWLGLRDDDMAEAEAE 89


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