BLASTX nr result
ID: Coptis24_contig00018036
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018036 (561 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003516797.1| PREDICTED: chloroplast envelope membrane pro... 78 9e-13 ref|XP_002309032.1| predicted protein [Populus trichocarpa] gi|2... 75 9e-12 ref|XP_004170347.1| PREDICTED: uncharacterized protein LOC101227... 72 5e-11 ref|XP_004152847.1| PREDICTED: uncharacterized protein LOC101213... 72 5e-11 ref|XP_003532317.1| PREDICTED: chloroplast envelope membrane pro... 72 6e-11 >ref|XP_003516797.1| PREDICTED: chloroplast envelope membrane protein-like [Glycine max] Length = 433 Score = 78.2 bits (191), Expect = 9e-13 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 4/91 (4%) Frame = -1 Query: 267 MFLMSTSLVLCQNFVTTYDPNLPPKKLPSCRISTSLVSLVTKRRRFSGVIVNAS----HR 100 M LMS+S+VLC N + ++ L K S S ++ L +K RR +G I A H Sbjct: 1 MILMSSSIVLCDNLIL-FNQKLLLKSFVSRGSSNFVIQLSSKTRRLNGFISKAEKHSGHS 59 Query: 99 RKRAWWKEFFLDEDGNWFGLKDDNMVEEEDE 7 RK +WW++FF ++DGNW GL+DD+MVE E E Sbjct: 60 RKSSWWQKFFFEDDGNWLGLRDDDMVEAEAE 90 >ref|XP_002309032.1| predicted protein [Populus trichocarpa] gi|222855008|gb|EEE92555.1| predicted protein [Populus trichocarpa] Length = 443 Score = 74.7 bits (182), Expect = 9e-12 Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 7/89 (7%) Frame = -1 Query: 258 MSTSLVLCQNFVTTYDPNLPPKKLPSCRISTSLVSL-VTKRRRFSGVIVNASH------R 100 M+TS+VLC N + N P + + +S SL ++ RRRF GV A + Sbjct: 1 MTTSIVLCNNLSFNTNHNQTPLRNRNLFAKSSSFSLQLSNRRRFCGVFPKAKKNGKNHSK 60 Query: 99 RKRAWWKEFFLDEDGNWFGLKDDNMVEEE 13 RKR WW+ FF DEDGNWFGLKDD++++ E Sbjct: 61 RKRNWWRRFFFDEDGNWFGLKDDDLLDAE 89 >ref|XP_004170347.1| PREDICTED: uncharacterized protein LOC101227705 [Cucumis sativus] Length = 349 Score = 72.4 bits (176), Expect = 5e-11 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 7/96 (7%) Frame = -1 Query: 267 MFLMSTSLVLCQNFV----TTYDPNLPPKKLPSCRISTSLVSLVTKRRRFSGVIVNAS-- 106 MFLMSTS++L +F+ T +L PSC + K + F ++NA Sbjct: 1 MFLMSTSMLLPHHFIFHDCTKLSSSL--SNFPSCNSFHEFSAFGRKGKGFYRHVLNAKKN 58 Query: 105 -HRRKRAWWKEFFLDEDGNWFGLKDDNMVEEEDEDI 1 + RKR+WW+ FF D+DGNW GLKDD M+E+E E I Sbjct: 59 GYSRKRSWWQRFFFDDDGNWLGLKDDGMLEDELESI 94 >ref|XP_004152847.1| PREDICTED: uncharacterized protein LOC101213957 [Cucumis sativus] Length = 349 Score = 72.4 bits (176), Expect = 5e-11 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 7/96 (7%) Frame = -1 Query: 267 MFLMSTSLVLCQNFV----TTYDPNLPPKKLPSCRISTSLVSLVTKRRRFSGVIVNAS-- 106 MFLMSTS++L +F+ T +L PSC + K + F ++NA Sbjct: 1 MFLMSTSMLLPHHFIFHDCTKLSSSL--SNFPSCNSFHEFSAFGRKGKGFYRHVLNAKKN 58 Query: 105 -HRRKRAWWKEFFLDEDGNWFGLKDDNMVEEEDEDI 1 + RKR+WW+ FF D+DGNW GLKDD M+E+E E I Sbjct: 59 GYSRKRSWWQRFFFDDDGNWLGLKDDGMLEDELESI 94 >ref|XP_003532317.1| PREDICTED: chloroplast envelope membrane protein-like [Glycine max] Length = 433 Score = 72.0 bits (175), Expect = 6e-11 Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 2/89 (2%) Frame = -1 Query: 267 MFLMSTSLVLCQNFVTTYDPNLPPKKLPSCRISTSLV-SLVTKRRRFSGVIVNAS-HRRK 94 M LMS+S+VLC + ++ L K S S++ V +K RR +G I A H RK Sbjct: 1 MILMSSSIVLCDKNLILFNQKLLLKSFVSHGSSSNFVIQFGSKTRRLNGFISKAEKHSRK 60 Query: 93 RAWWKEFFLDEDGNWFGLKDDNMVEEEDE 7 +WW+ FF ++DGNW GL+DD+M E E E Sbjct: 61 SSWWQNFFFNDDGNWLGLRDDDMAEAEAE 89