BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018034
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001774563.1| putative histone deacetylase complex, SIN3 c...    65   6e-09
ref|XP_001776865.1| histone deacetylase complex, SIN3 component ...    65   6e-09
ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ...    65   8e-09
emb|CBI32068.3| unnamed protein product [Vitis vinifera]               65   8e-09
ref|XP_002314629.1| SIN3 component, histone deacetylase complex ...    65   8e-09

>ref|XP_001774563.1| putative histone deacetylase complex, SIN3 component
           [Physcomitrella patens subsp. patens]
           gi|162674118|gb|EDQ60631.1| putative histone deacetylase
           complex, SIN3 component [Physcomitrella patens subsp.
           patens]
          Length = 990

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -3

Query: 234 TADVIAKIKVLFRGHQNLILGFNTFLPNGYEITLPLEGDK 115
           TA VI ++K LF+GH+ LILGFNTFLP GYEITLPLE DK
Sbjct: 43  TAGVITRVKDLFKGHRQLILGFNTFLPRGYEITLPLEEDK 82


>ref|XP_001776865.1| histone deacetylase complex, SIN3 component [Physcomitrella patens
           subsp. patens] gi|162671721|gb|EDQ58268.1| histone
           deacetylase complex, SIN3 component [Physcomitrella
           patens subsp. patens]
          Length = 1500

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -3

Query: 234 TADVIAKIKVLFRGHQNLILGFNTFLPNGYEITLPLEGDK 115
           TA VI ++K LF+GH+ LILGFNTFLP GYEITLPLE DK
Sbjct: 83  TAGVITRVKDLFKGHRQLILGFNTFLPRGYEITLPLEEDK 122


>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
           vinifera]
          Length = 1421

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = -3

Query: 234 TADVIAKIKVLFRGHQNLILGFNTFLPNGYEITLPLEGDK 115
           TA VIA++K LF+GH++LILGFNTFLP GYEITLPLE ++
Sbjct: 80  TAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQ 119


>emb|CBI32068.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = -3

Query: 234 TADVIAKIKVLFRGHQNLILGFNTFLPNGYEITLPLEGDK 115
           TA VIA++K LF+GH++LILGFNTFLP GYEITLPLE ++
Sbjct: 80  TAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQ 119


>ref|XP_002314629.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
           gi|222863669|gb|EEF00800.1| SIN3 component, histone
           deacetylase complex [Populus trichocarpa]
          Length = 1385

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = -3

Query: 234 TADVIAKIKVLFRGHQNLILGFNTFLPNGYEITLPLEGDK 115
           TA VIA++K LF+GH++LILGFNTFLP GYEITLPLE ++
Sbjct: 54  TAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQ 93