BLASTX nr result

ID: Coptis24_contig00018031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018031
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricin...    56   3e-06

>ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricinus communis]
           gi|223531005|gb|EEF32859.1| cysteine-type endopeptidase,
           putative [Ricinus communis]
          Length = 644

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
 Frame = -2

Query: 401 SKKLIPTISKNDKVPSSPRIKFNILKSSDSKELRPXXXXXXXGYAGYHID----IKERKE 234
           S+K IP++SK DKVPSSPR+KFNI  +S SK + P        +   +++    +K+R  
Sbjct: 395 SRKDIPSMSKVDKVPSSPRVKFNIFGNSLSKRILPTGDGKAESHKSQNMEMNGSMKDRVY 454

Query: 233 MKKITKEMPSVTNVAHVNESLDALDPE 153
           ++K  K+MPS  N    N+S    D E
Sbjct: 455 VEKHDKDMPSTINGNGCNKSRKINDGE 481


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