BLASTX nr result
ID: Coptis24_contig00018023
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018023 (492 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31498.3| unnamed protein product [Vitis vinifera] 55 5e-06 ref|XP_002277282.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis v... 55 5e-06 emb|CAN66644.1| hypothetical protein VITISV_018782 [Vitis vinifera] 55 5e-06 ref|NP_001044716.1| Os01g0833800 [Oryza sativa Japonica Group] g... 55 8e-06 >emb|CBI31498.3| unnamed protein product [Vitis vinifera] Length = 363 Score = 55.5 bits (132), Expect = 5e-06 Identities = 29/50 (58%), Positives = 33/50 (66%) Frame = +2 Query: 341 FGNKKREDPSSSSVVRAVTQAPPPPQPEELKLVEAETEQSKHAHSVALAT 490 FG K DP SSS A+ P P E++KL EAE EQSKHA+SVALAT Sbjct: 35 FGKHKNLDPVSSSTENAMPLPAPAPPIEDVKLTEAENEQSKHAYSVALAT 84 >ref|XP_002277282.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera] Length = 482 Score = 55.5 bits (132), Expect = 5e-06 Identities = 29/50 (58%), Positives = 33/50 (66%) Frame = +2 Query: 341 FGNKKREDPSSSSVVRAVTQAPPPPQPEELKLVEAETEQSKHAHSVALAT 490 FG K DP SSS A+ P P E++KL EAE EQSKHA+SVALAT Sbjct: 35 FGKHKNLDPVSSSTENAMPLPAPAPPIEDVKLTEAENEQSKHAYSVALAT 84 >emb|CAN66644.1| hypothetical protein VITISV_018782 [Vitis vinifera] Length = 482 Score = 55.5 bits (132), Expect = 5e-06 Identities = 29/50 (58%), Positives = 33/50 (66%) Frame = +2 Query: 341 FGNKKREDPSSSSVVRAVTQAPPPPQPEELKLVEAETEQSKHAHSVALAT 490 FG K DP SSS A+ P P E++KL EAE EQSKHA+SVALAT Sbjct: 35 FGKHKNLDPVSSSTENAMPLPAPAPPIEDVKLTEAENEQSKHAYSVALAT 84 >ref|NP_001044716.1| Os01g0833800 [Oryza sativa Japonica Group] gi|56202321|dbj|BAD73780.1| putative SF16 protein [Oryza sativa Japonica Group] gi|113534247|dbj|BAF06630.1| Os01g0833800 [Oryza sativa Japonica Group] gi|218189323|gb|EEC71750.1| hypothetical protein OsI_04322 [Oryza sativa Indica Group] gi|222619499|gb|EEE55631.1| hypothetical protein OsJ_03977 [Oryza sativa Japonica Group] Length = 500 Score = 54.7 bits (130), Expect = 8e-06 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 15/67 (22%) Frame = +2 Query: 335 WGFGNKKREDPSSSSVVRAVTQAPPP------------PQPEELK---LVEAETEQSKHA 469 W FG K+ DP +S+V + APPP PQPEE+K VE ++EQ+KHA Sbjct: 39 WPFGKSKKSDPWTSTVAVPTSTAPPPQPPPPPPTHPIQPQPEEIKDVKAVETDSEQNKHA 98 Query: 470 HSVALAT 490 +SVALA+ Sbjct: 99 YSVALAS 105