BLASTX nr result

ID: Coptis24_contig00018023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018023
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31498.3| unnamed protein product [Vitis vinifera]               55   5e-06
ref|XP_002277282.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis v...    55   5e-06
emb|CAN66644.1| hypothetical protein VITISV_018782 [Vitis vinifera]    55   5e-06
ref|NP_001044716.1| Os01g0833800 [Oryza sativa Japonica Group] g...    55   8e-06

>emb|CBI31498.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/50 (58%), Positives = 33/50 (66%)
 Frame = +2

Query: 341 FGNKKREDPSSSSVVRAVTQAPPPPQPEELKLVEAETEQSKHAHSVALAT 490
           FG  K  DP SSS   A+    P P  E++KL EAE EQSKHA+SVALAT
Sbjct: 35  FGKHKNLDPVSSSTENAMPLPAPAPPIEDVKLTEAENEQSKHAYSVALAT 84


>ref|XP_002277282.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]
          Length = 482

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/50 (58%), Positives = 33/50 (66%)
 Frame = +2

Query: 341 FGNKKREDPSSSSVVRAVTQAPPPPQPEELKLVEAETEQSKHAHSVALAT 490
           FG  K  DP SSS   A+    P P  E++KL EAE EQSKHA+SVALAT
Sbjct: 35  FGKHKNLDPVSSSTENAMPLPAPAPPIEDVKLTEAENEQSKHAYSVALAT 84


>emb|CAN66644.1| hypothetical protein VITISV_018782 [Vitis vinifera]
          Length = 482

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/50 (58%), Positives = 33/50 (66%)
 Frame = +2

Query: 341 FGNKKREDPSSSSVVRAVTQAPPPPQPEELKLVEAETEQSKHAHSVALAT 490
           FG  K  DP SSS   A+    P P  E++KL EAE EQSKHA+SVALAT
Sbjct: 35  FGKHKNLDPVSSSTENAMPLPAPAPPIEDVKLTEAENEQSKHAYSVALAT 84


>ref|NP_001044716.1| Os01g0833800 [Oryza sativa Japonica Group]
           gi|56202321|dbj|BAD73780.1| putative SF16 protein [Oryza
           sativa Japonica Group] gi|113534247|dbj|BAF06630.1|
           Os01g0833800 [Oryza sativa Japonica Group]
           gi|218189323|gb|EEC71750.1| hypothetical protein
           OsI_04322 [Oryza sativa Indica Group]
           gi|222619499|gb|EEE55631.1| hypothetical protein
           OsJ_03977 [Oryza sativa Japonica Group]
          Length = 500

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 15/67 (22%)
 Frame = +2

Query: 335 WGFGNKKREDPSSSSVVRAVTQAPPP------------PQPEELK---LVEAETEQSKHA 469
           W FG  K+ DP +S+V    + APPP            PQPEE+K    VE ++EQ+KHA
Sbjct: 39  WPFGKSKKSDPWTSTVAVPTSTAPPPQPPPPPPTHPIQPQPEEIKDVKAVETDSEQNKHA 98

Query: 470 HSVALAT 490
           +SVALA+
Sbjct: 99  YSVALAS 105


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