BLASTX nr result

ID: Coptis24_contig00018018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018018
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321810.1| predicted protein [Populus trichocarpa] gi|2...   186   3e-45
ref|XP_002277255.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A2 ...   172   6e-41
ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
gb|ABK95033.1| unknown [Populus trichocarpa]                          105   9e-21
emb|CBI27170.3| unnamed protein product [Vitis vinifera]              100   4e-19

>ref|XP_002321810.1| predicted protein [Populus trichocarpa] gi|222868806|gb|EEF05937.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  186 bits (472), Expect = 3e-45
 Identities = 91/179 (50%), Positives = 116/179 (64%), Gaps = 4/179 (2%)
 Frame = +1

Query: 118 SGRHWIAN-DMIIEDPQYSGVVRISAKALNITWGNDKRFWQWINLCKEESI---FETGAD 285
           SG HW  +   I  D       R+ AKALNI WGND RFWQWI L + E+    F+ GA 
Sbjct: 11  SGPHWKGDGSSISSDKACPATCRVPAKALNIIWGNDPRFWQWIKLSEVETRSVGFDEGAR 70

Query: 286 LLQVKWIQITRKLDLANMNLPPSTTYEIFYIVKFKVDAFGWHSAPIIFMVLENGNQMKTS 465
           LLQV WI++T KL     N+  +T Y ++Y++KF+VDAFGWHS PI F V  NG +   +
Sbjct: 71  LLQVNWIEVTGKLPSTMFNVASATKYGVYYVMKFQVDAFGWHSVPIKFKVRLNGQETVKN 130

Query: 466 EILEPYINCPDSWHEIPGGQFTVPADKNGLVEFGMLEVATDWWKGGMVLEGVKLKPKGG 642
            +LE Y    D WHEI GG+FTV  +  G+VEFGM EV ++WWKGG+VL G+K+KPK G
Sbjct: 131 FVLESYKEKHDVWHEICGGEFTVSKNAAGVVEFGMFEVKSEWWKGGVVLAGIKIKPKEG 189


>ref|XP_002277255.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A2 [Vitis vinifera]
           gi|297737970|emb|CBI27171.3| unnamed protein product
           [Vitis vinifera]
          Length = 185

 Score =  172 bits (435), Expect = 6e-41
 Identities = 93/188 (49%), Positives = 122/188 (64%), Gaps = 7/188 (3%)
 Frame = +1

Query: 100 EQRDWN-SGRHWIANDMIIEDPQYSGVVRISAKALNITWGNDKRFWQWINLCK---EESI 267
           EQR+   S  HW  +   + D  +SG++++  KAL+ITWGND RFWQ I+L     +E  
Sbjct: 4   EQREGGYSSPHWKGDGSTL-DQSFSGLIKVPVKALDITWGNDTRFWQQIDLTDHDTQEIG 62

Query: 268 FETGADLLQVKWIQITRKLDLANMNLPPS--TTYEIFYIVKFKVDAFGWHSAPIIFMVLE 441
           F+ G  LLQV WI++       N+N+ P+  T YEI+Y+VKF+VDAFGWHSAPI F V  
Sbjct: 63  FKEGMLLLQVNWIEVK-----GNLNITPTEDTKYEIYYMVKFRVDAFGWHSAPIKFKVRH 117

Query: 442 NGNQMKTS-EILEPYINCPDSWHEIPGGQFTVPADKNGLVEFGMLEVATDWWKGGMVLEG 618
            G +  ++  ILE Y    D WHEIPGG+F+V +     VEFG+ EV +DWWKGGMVL G
Sbjct: 118 KGEETHSNIMILESYREKHDVWHEIPGGEFSVASKDPVNVEFGIFEVDSDWWKGGMVLGG 177

Query: 619 VKLKPKGG 642
           VK+K K G
Sbjct: 178 VKIKAKSG 185


>ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  107 bits (267), Expect = 2e-21
 Identities = 53/162 (32%), Positives = 88/162 (54%)
 Frame = +1

Query: 151 IEDPQYSGVVRISAKALNITWGNDKRFWQWINLCKEESIFETGADLLQVKWIQITRKLDL 330
           +E   Y     + AK L+ITWG D R+W+W ++C+   +    A+LL V W++I  K + 
Sbjct: 122 VEKKCYRNCFMLFAKDLSITWGGDARYWKWPSICESGDVTVDVAELLDVCWLEIYGKFN- 180

Query: 331 ANMNLPPSTTYEIFYIVKFKVDAFGWHSAPIIFMVLENGNQMKTSEILEPYINCPDSWHE 510
               L P   YE+ +++K K  A+GW     + +VL NG + +  E L+      + W E
Sbjct: 181 -TKMLSPGILYEVVFVIKLKDPAYGWGVPVNVSLVLPNGYKQERKEKLQ--TKPREQWIE 237

Query: 511 IPGGQFTVPADKNGLVEFGMLEVATDWWKGGMVLEGVKLKPK 636
           +P G+F    +  G ++FGM E     WK G+V++G+ ++PK
Sbjct: 238 VPVGEFITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIRPK 279


>gb|ABK95033.1| unknown [Populus trichocarpa]
          Length = 280

 Score =  105 bits (261), Expect = 9e-21
 Identities = 52/162 (32%), Positives = 87/162 (53%)
 Frame = +1

Query: 151 IEDPQYSGVVRISAKALNITWGNDKRFWQWINLCKEESIFETGADLLQVKWIQITRKLDL 330
           +E   Y     + AK L+ITWG D R+W+W ++C+   +    A+LL V W++I  K + 
Sbjct: 122 VEKKCYRNCFMLFAKDLSITWGGDTRYWKWPSICESGDVTVDVAELLDVCWLEIYGKFN- 180

Query: 331 ANMNLPPSTTYEIFYIVKFKVDAFGWHSAPIIFMVLENGNQMKTSEILEPYINCPDSWHE 510
               L P   YE+ +++K K  A+GW     + +VL NG + +  E L+      + W E
Sbjct: 181 -TKMLSPGILYEVVFVIKLKDPAYGWGVPVNVSLVLPNGYKQERKEKLQ--TKPREQWIE 237

Query: 511 IPGGQFTVPADKNGLVEFGMLEVATDWWKGGMVLEGVKLKPK 636
           +P G+     +  G ++FGM E     WK G+V++G+ ++PK
Sbjct: 238 VPVGELITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIRPK 279


>emb|CBI27170.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 50/160 (31%), Positives = 84/160 (52%)
 Frame = +1

Query: 157 DPQYSGVVRISAKALNITWGNDKRFWQWINLCKEESIFETGADLLQVKWIQITRKLDLAN 336
           + +++    I A+ L+ITW  D R+W W+ + +   +F   A+L+ V W+++  K + A 
Sbjct: 83  EKKFNNCFMIFARNLSITWAEDSRYWHWLKIKETSDVFVDVAELINVCWLEVHGKFETA- 141

Query: 337 MNLPPSTTYEIFYIVKFKVDAFGWHSAPIIFMVLENGNQMKTSEILEPYINCPDSWHEIP 516
             L P   Y++ ++V  K  A+GW     + + L +GN  +  E L         W EIP
Sbjct: 142 -KLSPGIMYKVAFVVMMKDPAYGWGVPVNLKLALPDGNTQEHKENLRE--KPKGQWIEIP 198

Query: 517 GGQFTVPADKNGLVEFGMLEVATDWWKGGMVLEGVKLKPK 636
            GQF   A+  G +EF + E     WK G+V++GV ++PK
Sbjct: 199 VGQFQTSAENIGEIEFSLFEYEGGDWKSGLVVKGVIIQPK 238


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