BLASTX nr result

ID: Coptis24_contig00017886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017886
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325162.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002884758.1| hypothetical protein ARALYDRAFT_478310 [Arab...    56   3e-06
ref|XP_002523543.1| zinc finger protein, putative [Ricinus commu...    56   3e-06
ref|XP_004162452.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    55   8e-06
ref|XP_004146703.1| PREDICTED: uncharacterized protein LOC101215...    55   8e-06

>ref|XP_002325162.1| predicted protein [Populus trichocarpa] gi|222866596|gb|EEF03727.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
 Frame = -1

Query: 243 IIAYVDQTPPSLKPVKEEITYDYSSGFALGESSHRGLGFCD--EEPDGEVLGFNPTSVDE 70
           I+A +D+TP S KP     TY+YSS F LGESSH+GLGFC+  E   G  L       +E
Sbjct: 134 IVACLDETPTS-KPYNLNSTYNYSSDFLLGESSHKGLGFCEELEATTGAELSSKQMEEEE 192

Query: 69  EMWTGMDSSSK-REVENED 16
           +  +  DSSS  +E++ +D
Sbjct: 193 KNGSSFDSSSSDKEMDADD 211


>ref|XP_002884758.1| hypothetical protein ARALYDRAFT_478310 [Arabidopsis lyrata subsp.
           lyrata] gi|297330598|gb|EFH61017.1| hypothetical protein
           ARALYDRAFT_478310 [Arabidopsis lyrata subsp. lyrata]
          Length = 777

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = -1

Query: 243 IIAYVDQTPPSLKPVKEEITYDYSSGFALGESSHRGLGFCDE 118
           ++A++DQTP S K +K    Y+Y   F LG+ SHRGLGFCD+
Sbjct: 146 VVAFLDQTPSSSKGIKVSYDYEYEPSFVLGDDSHRGLGFCDD 187


>ref|XP_002523543.1| zinc finger protein, putative [Ricinus communis]
           gi|223537250|gb|EEF38882.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 775

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
 Frame = -1

Query: 243 IIAYVDQTPPSLKPVKEEITYDYSSGFALGESSHRGLGFCDE-EPDGEVLGFNPTSVDEE 67
           I+AY+D T P LKP   + TYDY S F L  S HRGLGF DE E + + +G +    +EE
Sbjct: 144 IVAYLDNTTP-LKPNNVDCTYDYDSSFVLDGSVHRGLGFHDESETNPDAIGSSSKQTEEE 202

Query: 66  --MWTGMDSS-SKREVENED 16
               T  DSS S++E++ +D
Sbjct: 203 GKGETCFDSSHSEKEMDADD 222


>ref|XP_004162452.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226078 [Cucumis sativus]
          Length = 802

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = -1

Query: 243 IIAYVDQTPPSLKPVKEEITYDYSSGFALGESSHRGLGFCDEE 115
           I+AYVD+ PP L     E TYDY + F LGESSHRGLGF D++
Sbjct: 144 IVAYVDENPP-LMADNLEFTYDYGTSFVLGESSHRGLGFHDDD 185


>ref|XP_004146703.1| PREDICTED: uncharacterized protein LOC101215133 [Cucumis sativus]
          Length = 793

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = -1

Query: 243 IIAYVDQTPPSLKPVKEEITYDYSSGFALGESSHRGLGFCDEE 115
           I+AYVD+ PP L     E TYDY + F LGESSHRGLGF D++
Sbjct: 134 IVAYVDENPP-LMADNLEFTYDYGTSFVLGESSHRGLGFHDDD 175


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