BLASTX nr result

ID: Coptis24_contig00017578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017578
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis v...   173   4e-41
ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis v...   173   4e-41
emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]   173   4e-41
emb|CAN80138.1| hypothetical protein VITISV_028512 [Vitis vinifera]   171   1e-40
ref|XP_003531692.1| PREDICTED: LOW QUALITY PROTEIN: gibberellin ...   156   4e-36

>ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis vinifera]
           gi|297743336|emb|CBI36203.3| unnamed protein product
           [Vitis vinifera]
          Length = 311

 Score =  173 bits (438), Expect = 4e-41
 Identities = 81/147 (55%), Positives = 107/147 (72%)
 Frame = +1

Query: 301 RLPIINFTGEELRPGTSSWCLVRKDVRQALENYGCFEAVCDRNSADLQTVFFGALKNLFD 480
           RLP++NF+   L+PGT SW L  KDV  ALE YGCF AV D+ S++L    F  L+ LFD
Sbjct: 7   RLPVLNFSTGTLKPGTRSWLLACKDVLHALEEYGCFVAVYDKVSSELDNTTFCQLEELFD 66

Query: 481 LPTETKLKNTFDEPFRGYTGSSPLVPLYESMAINDALVLERLENFTNLMWPDGNPSFCKN 660
           LPTETK+KNT D+P+ GY G  PL+PL+ESM I DA  L+ +E+FTN+MWP GN  FC+ 
Sbjct: 67  LPTETKVKNTSDKPYFGYIGQHPLIPLHESMGIEDATTLKGVESFTNIMWPAGNDHFCET 126

Query: 661 VYSFIRQISSMEQMVKRMVCESFNVEQ 741
           V S+ + +S +EQMVK+MV ES++ E+
Sbjct: 127 VLSYSKLVSELEQMVKKMVFESYDAEK 153


>ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis vinifera]
           gi|297743335|emb|CBI36202.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score =  173 bits (438), Expect = 4e-41
 Identities = 77/147 (52%), Positives = 108/147 (73%)
 Frame = +1

Query: 301 RLPIINFTGEELRPGTSSWCLVRKDVRQALENYGCFEAVCDRNSADLQTVFFGALKNLFD 480
           +LP+I+F+  EL+PGT  W LV+  V++ALE YGCFEA  ++   DL+   FGAL+ LFD
Sbjct: 8   KLPVIDFSDPELKPGTLQWNLVKAQVQKALEEYGCFEAFFNKVPLDLRKAIFGALEELFD 67

Query: 481 LPTETKLKNTFDEPFRGYTGSSPLVPLYESMAINDALVLERLENFTNLMWPDGNPSFCKN 660
           LP +TKL+N+  +P+ GY G  P VPLYESM I+DALV E+ E+FT L+WP+GNP+FCK 
Sbjct: 68  LPLQTKLRNSSKKPYHGYVGQYPTVPLYESMGIDDALVQEKAEHFTKLLWPEGNPNFCKT 127

Query: 661 VYSFIRQISSMEQMVKRMVCESFNVEQ 741
           + SF  Q+S ++  ++RMV ES  +E+
Sbjct: 128 IQSFSEQLSELDHTIRRMVLESLGMEK 154


>emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]
          Length = 311

 Score =  173 bits (438), Expect = 4e-41
 Identities = 81/147 (55%), Positives = 107/147 (72%)
 Frame = +1

Query: 301 RLPIINFTGEELRPGTSSWCLVRKDVRQALENYGCFEAVCDRNSADLQTVFFGALKNLFD 480
           RLP++NF+   L+PGT SW L  KDV  ALE YGCF AV D+ S++L    F  L+ LFD
Sbjct: 7   RLPVLNFSTGTLKPGTRSWLLACKDVLHALEEYGCFVAVYDKVSSELDNTTFCQLEELFD 66

Query: 481 LPTETKLKNTFDEPFRGYTGSSPLVPLYESMAINDALVLERLENFTNLMWPDGNPSFCKN 660
           LPTETK+KNT D+P+ GY G  PL+PL+ESM I DA  L+ +E+FTN+MWP GN  FC+ 
Sbjct: 67  LPTETKVKNTSDKPYFGYIGQHPLIPLHESMGIEDATTLKGVESFTNIMWPAGNDHFCET 126

Query: 661 VYSFIRQISSMEQMVKRMVCESFNVEQ 741
           V S+ + +S +EQMVK+MV ES++ E+
Sbjct: 127 VLSYSKLVSELEQMVKKMVFESYDAEK 153


>emb|CAN80138.1| hypothetical protein VITISV_028512 [Vitis vinifera]
          Length = 314

 Score =  171 bits (434), Expect = 1e-40
 Identities = 77/147 (52%), Positives = 107/147 (72%)
 Frame = +1

Query: 301 RLPIINFTGEELRPGTSSWCLVRKDVRQALENYGCFEAVCDRNSADLQTVFFGALKNLFD 480
           +LP I+F+  EL+PGT  W LV+  V++ALE YGCFEA  ++   DL+   FGAL+ LFD
Sbjct: 8   KLPXIDFSDPELKPGTLQWNLVKAQVQKALEEYGCFEAFFNKVPLDLRKAIFGALEELFD 67

Query: 481 LPTETKLKNTFDEPFRGYTGSSPLVPLYESMAINDALVLERLENFTNLMWPDGNPSFCKN 660
           LP +TKL+N+  +P+ GY G  P VPLYESM I+DALV E+ E+FT L+WP+GNP+FCK 
Sbjct: 68  LPLQTKLRNSSKKPYHGYVGQYPTVPLYESMGIDDALVQEKAEHFTKLLWPEGNPNFCKT 127

Query: 661 VYSFIRQISSMEQMVKRMVCESFNVEQ 741
           + SF  Q+S ++  ++RMV ES  +E+
Sbjct: 128 IQSFSEQLSELDHTIRRMVLESLGMEK 154


>ref|XP_003531692.1| PREDICTED: LOW QUALITY PROTEIN: gibberellin 20 oxidase 1-like
           [Glycine max]
          Length = 314

 Score =  156 bits (395), Expect = 4e-36
 Identities = 71/154 (46%), Positives = 105/154 (68%)
 Frame = +1

Query: 280 MECKASHRLPIINFTGEELRPGTSSWCLVRKDVRQALENYGCFEAVCDRNSADLQTVFFG 459
           M  +A+ +LP+I+FT  +L     +W  V+  V +AL +YGCFEA+ D+   +L+   F 
Sbjct: 1   MGSEATLKLPVIDFTNLKLEANNPNWEAVKSQVHKALVDYGCFEAIFDKVPLELRKAIFA 60

Query: 460 ALKNLFDLPTETKLKNTFDEPFRGYTGSSPLVPLYESMAINDALVLERLENFTNLMWPDG 639
           AL+ LFDLP +TK+ N   +P+ GY G  P+VPL+ESM I+DA V E +EN TN+MWP G
Sbjct: 61  ALQELFDLPLQTKILNVSKKPYHGYVGQYPMVPLFESMGIDDANVXENVENMTNIMWPHG 120

Query: 640 NPSFCKNVYSFIRQISSMEQMVKRMVCESFNVEQ 741
           NPSF K + SF  Q+S ++Q++++M+ ES  VE+
Sbjct: 121 NPSFGKAIQSFSEQLSELDQIIRKMILESLGVEE 154


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