BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017565
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containi...   157   8e-37
ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [S...   156   1e-36
gb|AFW73259.1| hypothetical protein ZEAMMB73_606431 [Zea mays]        156   2e-36
ref|XP_003575540.1| PREDICTED: pentatricopeptide repeat-containi...   154   5e-36
emb|CBI18084.3| unnamed protein product [Vitis vinifera]              154   7e-36

>ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Vitis vinifera]
          Length = 654

 Score =  157 bits (397), Expect = 8e-37
 Identities = 78/151 (51%), Positives = 100/151 (66%), Gaps = 1/151 (0%)
 Frame = +2

Query: 5   GLVEQGIRLFNLMKT-YNIEPGIQHYGCLVDLLGRSNLVREAKMLIDYMPMEPGAVIWST 181
           G V QG+R+FN MK  Y IEPG++HYGCLVDLLGRS    E K +I+ MPM+P   IW  
Sbjct: 476 GFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGA 535

Query: 182 LLAACRKHGDIEIGEIAAQKLVELAPDYGGGYILLSNLYANSCKWXXXXXXXXXXXXXXX 361
           +L+ACR +G+IEI EIA ++L++L P+  GGY+LLSN+YA S +W               
Sbjct: 536 VLSACRAYGNIEIAEIAGKELLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGV 595

Query: 362 XKVAGLSWIEVDGEIHEFLVGDKFHPRSMEI 454
            K AG S + VDG IHEF+  DK HPR +EI
Sbjct: 596 KKTAGCSSVVVDGIIHEFVAADKRHPRWIEI 626


>ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
           gi|241932439|gb|EES05584.1| hypothetical protein
           SORBIDRAFT_04g028970 [Sorghum bicolor]
          Length = 485

 Score =  156 bits (395), Expect = 1e-36
 Identities = 73/153 (47%), Positives = 96/153 (62%)
 Frame = +2

Query: 2   GGLVEQGIRLFNLMKTYNIEPGIQHYGCLVDLLGRSNLVREAKMLIDYMPMEPGAVIWST 181
           GGLV +G + F+LM++  I P IQHYGCLVDLLGR+  ++EA  L   +P +PG VIWS+
Sbjct: 307 GGLVSEGFKYFDLMRSMGIRPMIQHYGCLVDLLGRAGFLKEAFNLASNLPEDPGFVIWSS 366

Query: 182 LLAACRKHGDIEIGEIAAQKLVELAPDYGGGYILLSNLYANSCKWXXXXXXXXXXXXXXX 361
           LLAAC  HGD+E+ E+ A KL +  P +G  Y+LLSN YA + +W               
Sbjct: 367 LLAACHSHGDVEMAELTASKLADAKPSHGSSYVLLSNTYARAKQWEDLRRTRRRMEEHGV 426

Query: 362 XKVAGLSWIEVDGEIHEFLVGDKFHPRSMEIHR 460
            K  GLSWIEVDG +H F   DK H  S +I++
Sbjct: 427 TKKPGLSWIEVDGGVHSFATADKLHMESEDIYQ 459


>gb|AFW73259.1| hypothetical protein ZEAMMB73_606431 [Zea mays]
          Length = 488

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/152 (48%), Positives = 96/152 (63%)
 Frame = +2

Query: 2   GGLVEQGIRLFNLMKTYNIEPGIQHYGCLVDLLGRSNLVREAKMLIDYMPMEPGAVIWST 181
           GGLV++G + F+LM++  I P IQHYGCLVDLLGR+  ++EA  L   +P +PG VIWS+
Sbjct: 311 GGLVDEGFKYFDLMRSMGIRPMIQHYGCLVDLLGRAGFLKEAFNLASNLPEDPGFVIWSS 370

Query: 182 LLAACRKHGDIEIGEIAAQKLVELAPDYGGGYILLSNLYANSCKWXXXXXXXXXXXXXXX 361
           LLAACR HG++E+ E+ A KL E  P +G  Y+LLSN YA + +W               
Sbjct: 371 LLAACRSHGNVEMAELTASKLAEAKPSHGSSYVLLSNTYARAEQWEDSKRTRRRMEEHRV 430

Query: 362 XKVAGLSWIEVDGEIHEFLVGDKFHPRSMEIH 457
            K  GLSWIE+DG +H F   DK H  S  I+
Sbjct: 431 AKKPGLSWIEIDGSVHSFATADKLHIESEGIY 462


>ref|XP_003575540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 491

 Score =  154 bits (390), Expect = 5e-36
 Identities = 71/153 (46%), Positives = 97/153 (63%)
 Frame = +2

Query: 2   GGLVEQGIRLFNLMKTYNIEPGIQHYGCLVDLLGRSNLVREAKMLIDYMPMEPGAVIWST 181
           GGLV++G + FN+M+   I P IQHYGCLVDLLGR+  + EA  L   +P +PG V WS+
Sbjct: 315 GGLVDEGFKYFNMMRKMGIRPSIQHYGCLVDLLGRAGFLEEAFNLASSLPKDPGFVTWSS 374

Query: 182 LLAACRKHGDIEIGEIAAQKLVELAPDYGGGYILLSNLYANSCKWXXXXXXXXXXXXXXX 361
           LLAAC+ HG++++ E+AAQKL +  P++G  Y+LLSN YA + +W               
Sbjct: 375 LLAACQTHGNVDMAEVAAQKLADAEPNHGSSYVLLSNAYARAGQWEDLKRTRSRMEAHRA 434

Query: 362 XKVAGLSWIEVDGEIHEFLVGDKFHPRSMEIHR 460
            K  GLSWIEVDG +H F   DK H  +  I++
Sbjct: 435 VKKPGLSWIEVDGSVHSFGTADKSHTENKGIYQ 467


>emb|CBI18084.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/152 (48%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
 Frame = +2

Query: 5   GLVEQGIRLFNLM-KTYNIEPGIQHYGCLVDLLGRSNLVREAKMLIDYMPMEPGAVIWST 181
           GLV++G R FN M + +++ P I+HYGC+VDLLGR+ L+ EA  LI  MPME  A++W  
Sbjct: 239 GLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGA 298

Query: 182 LLAACRKHGDIEIGEIAAQKLVELAPDYGGGYILLSNLYANSCKWXXXXXXXXXXXXXXX 361
           LL ACR H D ++ E+A ++L+EL P   G Y+LLSN+Y+ + KW               
Sbjct: 299 LLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRI 358

Query: 362 XKVAGLSWIEVDGEIHEFLVGDKFHPRSMEIH 457
            K  G SWIEVDG +HEFLVGDK+HP S +I+
Sbjct: 359 QKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIY 390