BLASTX nr result

ID: Coptis24_contig00017517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017517
         (1773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280501.1| PREDICTED: uncharacterized protein LOC100254...    79   3e-12
ref|XP_002263827.2| PREDICTED: uncharacterized protein LOC100263...    75   6e-11
ref|XP_002311663.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-11
emb|CBI26382.3| unnamed protein product [Vitis vinifera]               74   1e-10
ref|XP_003605480.1| AIG1-like protein, partial [Medicago truncat...    72   4e-10

>ref|XP_002280501.1| PREDICTED: uncharacterized protein LOC100254457 [Vitis vinifera]
          Length = 376

 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 54/135 (40%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
 Frame = -3

Query: 1264 IKLPDPPVGEGKCYEVPCKDLRPSLEWSPECGWTVPISAESEASHFCARLVQPV----IQ 1097
            I L  PP GEG  YEV C DLRPSL+WSP  GW VPI  ESE    CARLV+PV     +
Sbjct: 142  IDLLPPPDGEGLSYEVFCNDLRPSLDWSPSYGWRVPIPTESETGRCCARLVKPVYYVPAE 201

Query: 1096 ETGTNTDHSKEKRXXXXXXXXXXXXSAGTSPHPEISSHSP-KGTPQQLFGCALNEETQRP 920
              G      +               S  +SP P+ S HSP K   +Q    A +   ++ 
Sbjct: 202  SEGRTDSQGRAGSSLKCNPSFSSHISDYSSPPPDGSEHSPEKEMTEQPLNIA-DSRKRKQ 260

Query: 919  CVGTGSDL--GDVGM 881
             + T  DL  GDVG+
Sbjct: 261  TLKTKMDLHKGDVGI 275



 Score = 67.8 bits (164), Expect = 9e-09
 Identities = 37/97 (38%), Positives = 55/97 (56%)
 Frame = -2

Query: 584 VGMGKLXXXXXXXXAHVERVSAAAEKTTGRDRYNSNNKPSKRIRDSGQEYLNTSYSDTLE 405
           VG+ K         +H+   S   E T G     SN+  SK++   G   LN+ +SDTL+
Sbjct: 273 VGIRKTSSSDSVSSSHIGDTSE--EMTNGGIDRCSNSGSSKKMETDGSIALNSMHSDTLD 330

Query: 404 SSIMDLEELVNKIKWLKRVHQYGFRNANAVAPSWKFL 294
           ++I+DLEEL NK+KW+K +  +G    NA+ P W+FL
Sbjct: 331 AAILDLEELANKVKWVKGILDHGIPLPNALRPPWRFL 367


>ref|XP_002263827.2| PREDICTED: uncharacterized protein LOC100263001 [Vitis vinifera]
          Length = 936

 Score = 75.1 bits (183), Expect = 6e-11
 Identities = 43/101 (42%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
 Frame = -3

Query: 1264 IKLPDPPVGEGKCYEVPCKDLRPSLEWSPECGWTVPISAESEASHFCARLVQPV----IQ 1097
            I L  PP GEG  YEV CKDLRPSL+WSP  GW VP   ESE    CA+LV+PV     +
Sbjct: 702  IDLLPPPNGEGLSYEVFCKDLRPSLDWSPSYGWRVPSPMESETGRCCAQLVKPVNYVPAE 761

Query: 1096 ETGTNTDHSKEKRXXXXXXXXXXXXSAGTSPHPEISSHSPK 974
              G      +               S  +SP P+ S HSP+
Sbjct: 762  NEGRTDSQGRAGSSVKFNPSFSSHISDCSSPPPDGSEHSPE 802



 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
 Frame = -2

Query: 578  MGKLXXXXXXXXAHVERVSAAAEKTTG-RDRYNSNNKPSKRIRDSGQEYLNTSYSDTLES 402
            +GK         +HV   S   E+T G RDR   N+  S+++   G   LN+ +SDTLE+
Sbjct: 835  IGKTSSSDSVSTSHVGHTSE--ERTIGGRDRCG-NSGSSRKMGTDGSIALNSMHSDTLEA 891

Query: 401  SIMDLEELVNKIKWLKRVHQYGFRNANAVAPSWKFL 294
            +I+DLEEL NK+KW+K + ++G    NA+ P WKFL
Sbjct: 892  AILDLEELANKVKWVKGILEHGIPLPNALQPPWKFL 927


>ref|XP_002311663.1| predicted protein [Populus trichocarpa] gi|222851483|gb|EEE89030.1|
            predicted protein [Populus trichocarpa]
          Length = 263

 Score = 74.7 bits (182), Expect = 7e-11
 Identities = 35/63 (55%), Positives = 40/63 (63%)
 Frame = -3

Query: 1270 YPIKLPDPPVGEGKCYEVPCKDLRPSLEWSPECGWTVPISAESEASHFCARLVQPVIQET 1091
            Y I L  PP GEG  YE   KD RPSL WSPE GWTVPI +  +  H CARL++PV Q +
Sbjct: 136  YQIDLFPPPAGEGSSYEASSKDFRPSLSWSPENGWTVPIPSGIDYHHPCARLIKPVNQGS 195

Query: 1090 GTN 1082
              N
Sbjct: 196  SIN 198


>emb|CBI26382.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 35/54 (64%), Positives = 37/54 (68%)
 Frame = -3

Query: 1264 IKLPDPPVGEGKCYEVPCKDLRPSLEWSPECGWTVPISAESEASHFCARLVQPV 1103
            I L  PP GEG  YEV C DLRPSL+WSP  GW VPI  ESE    CARLV+PV
Sbjct: 153  IDLLPPPDGEGLSYEVFCNDLRPSLDWSPSYGWRVPIPTESETGRCCARLVKPV 206


>ref|XP_003605480.1| AIG1-like protein, partial [Medicago truncatula]
           gi|355506535|gb|AES87677.1| AIG1-like protein, partial
           [Medicago truncatula]
          Length = 382

 Score = 72.4 bits (176), Expect = 4e-10
 Identities = 39/97 (40%), Positives = 57/97 (58%)
 Frame = -2

Query: 512 EKTTGRDRYNSNNKPSKRIRDSGQEYLNTSYSDTLESSIMDLEELVNKIKWLKRVHQYGF 333
           E+T    R N ++ P+K++R +    LN+  S+T+ES+I+DLEELVNKIKWL+ V +   
Sbjct: 284 ERTASNSRCNDDDYPAKKMRSNLSLCLNSMSSNTMESAILDLEELVNKIKWLRAVLKSEV 343

Query: 332 RNANAVAPSWKFL*ILILDSKIFMCLSTRCK*KVHKL 222
             + A  PSW F  I+      F   S +CK  V+ L
Sbjct: 344 PLSGAKRPSWDFCSIMRHAYSYFFSFSNKCKTSVYNL 380


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